Styela clava (leathery sea squirt): 120327731
Help
Entry
120327731 CDS
T07291
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120327731
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120327731
Spliceosome [BR:
sclv03041
]
Complex C
Other components
Complex C specific factors
120327731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Cas3-like_C_2
nSTAND3
AAA_7
ABC_tran
Flavi_DEAD
AAA_23
Motif
Other DBs
NCBI-GeneID:
120327731
NCBI-ProteinID:
XP_039250011
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MSQKIKFWRPGDSSPQQNVLQERQTNTFDSSILYKPTGADLSLDNQRKRLPIHNYRSHII
YLLENNRTLIIVGETGCGKSTQIPQYLVESGWATSENQKIAITEPRRVAAVSLASRVADE
RVGTLGLEVGYAIRFDECYDDKKTLIKFMTDGVLLREMMTDPLLKQYSVIMVDEAHERSI
NTDMCIGLLKKIQKRRPELRLIVASATIDAEKFFDFFNVKDEQENDSCAILSVEGRVHPV
ETFYSVDPVPDYVTATVKTIMEIHLSPKEGDILAFLTGQEEVDRAVAQVQEQARSAAKNG
MKKYLIVMPMYSTLPIHEQQKIFEKVSRNARKVVISTNIAETSITVNGVVFVVDCGFVKI
KAYNPHTGIESLMVNPTSKASALQRAGRAGRCRLGEAYRLYTEEDYDKLDDITVPEMQRT
SLVPVLLQLKSLGVENVVRFDFLSPPPAQCMINAMETLYALGAINENGSLTQPLGFQMSE
FPLGPQFAKMILNSETFECSEEIITIAAMLQVNTVFSMSARTKTQSMKEHRKFAVAEGDH
ITMLNVYNAFVNEGNETKRWSNRYCLNFERLKRACQLRKQLEKYLNRFNIKLISCGRDTE
KILRCITSGFFANAAKLQMDGSYKSLKGGNTLQIHPTSVLATEQPPQFVIFNEIMQTTSY
YMRDISVIKPEWLCELASHYYESGTERSIGVKRMRVF
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaagataaaattctggaggcctggagattcttctccgcaacaaaatgttctt
caagaacgtcaaacgaacactttcgattctagcattttgtacaagcctactggagctgac
ctatcacttgataaccaaaggaaaagattgccgattcacaactatcgaagtcacattata
tatttgctagaaaataatcgaacacttataatagttggagagacgggatgtggaaaaagt
acacaaattccccaatatctggtcgagtctggatgggcaacatctgagaatcaaaaaatt
gctataacagaacctcgtcgagtagcagcagtttctcttgcctccagggtggcagatgaa
agagtgggaacattgggactggaagttggatatgcaatccgttttgatgaatgttatgat
gacaagaaaactttaattaagtttatgactgatggtgttttgcttcgagaaatgatgaca
gatcctttgttaaagcagtattctgttattatggttgatgaagcacatgagcgcagcatt
aatacagatatgtgcataggtcttctcaagaaaatacaaaaacgaagacctgagttgaga
ctaattgtagcctcagctaccattgatgctgaaaaatttttcgatttcttcaatgtaaaa
gatgagcaagaaaatgattcttgtgcaattttgtcagttgagggcagagttcaccctgtt
gaaactttttattcagttgatcctgttccagattatgttacagccactgttaaaacaata
atggaaatacatctatcacctaaagaaggggatattcttgcatttcttactggacaagag
gaagtagacagagctgttgctcaagtacaagaacaagctcgatcggctgctaaaaatggc
atgaaaaaatatttgattgtcatgccgatgtatagcactttgccaattcatgaacagcaa
aaaatttttgaaaaagtatctcgaaacgccagaaaggtggttataagtacgaatatagct
gaaacatccattactgtcaatggtgtagtatttgtggtcgattgtggtttcgttaaaatc
aaagcatacaatccacacacaggcattgaatcgctgatggtcaatccgacatcgaaagca
tccgctttacaaagagctggtagagcaggacgatgcaggcttggtgaagcataccgactt
tacacagaagaagactatgacaagcttgatgatataactgttccagagatgcaaaggact
tcacttgtgcctgttcttcttcagctaaaatctcttggagtagaaaatgttgtgagattt
gatttcttgtcacctcctcctgcccaatgtatgattaacgcaatggaaaccttgtatgca
ttgggtgcaataaatgagaatggctctctcacccaacctttaggatttcaaatgtcagaa
ttccctctcggacctcaatttgcaaaaatgattttgaactcggaaacatttgaatgctct
gaggaaattattacaatcgcagctatgctccaggtaaacacagtgttttccatgtctgca
aggacaaaaacacagtcaatgaaagaacatagaaagtttgcggtagctgaaggtgaccac
ataactatgttaaatgtatacaatgcgtttgtaaatgaaggaaatgagactaagagatgg
tcaaatcgctattgtttaaattttgaaagattgaagcgtgcctgtcaactgaggaaacag
cttgaaaaataccttaataggtttaatatcaagttgatatcatgtggaagagatactgaa
aaaattcttcgttgcatcacatctggattttttgcaaatgctgctaaacttcaaatggat
ggttcttataaatcattaaagggtggtaatacattacaaattcatcccacttctgttctt
gccacagaacaaccgcctcaatttgttattttcaatgaaataatgcaaacaacaagctat
tatatgagagatatatctgttatcaagcctgaatggctttgtgaacttgcttctcattat
tatgaatctgggactgaaagatcgattggtgtaaaacgaatgagagtgttttga
DBGET
integrated database retrieval system
