Styela clava (leathery sea squirt): 120327922
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Entry
120327922 CDS
T07291
Name
(RefSeq) non-homologous end-joining factor 1-like
KO
K10980
non-homologous end-joining factor 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120327922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120327922
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
120327922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
120327922
NCBI-ProteinID:
XP_039250226
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
METRGWKLLTCDKGKTKFLIKLFLINCQDNSSYNLIICDLVNIWEESLSNDDIKIRCKQL
NRRLEAPTQSILLHIQETLLHHTTNVFTVVETSKELVTISLKNSFQEGIPFLWEFTCKMV
QTQMSIELFVEPFLKLVASLQCSNDQLIKVIKKKDAEIRDYKESGSKVSRPYLETSEFDS
EAFRKDVRQTSEYVSAIIKDSFMIATDDSINLKLVDVEADAKSPPSISNSSSLSGVANTD
SPVKRATAKIVGHKKNKIIRGGRRQPMGVEVLSDSDSDVDAKPTPPPVKRASNQEKKKAT
KKKKVIDKRKKLF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaaactagaggttggaaattgcttacttgtgataaaggcaaaacgaagtttcttatc
aagttgtttcttatcaactgtcaggataattcttcatacaatcttatcatttgcgatttg
gtgaatatctgggaagaatccctttcaaacgatgatataaaaataagatgcaaacaactt
aatcgaagattagaagcaccaacacaaagtattcttctacatattcaagaaacattgctt
catcatactacaaatgtttttacggttgttgaaacatcaaaagaattagttaccatcagc
ctgaaaaattcatttcaagaaggaatcccgttcttatgggaattcacttgcaaaatggtc
caaactcaaatgagcattgaactttttgttgaacctttcttgaagcttgtggcaagttta
caatgctctaatgatcaactcattaaggttataaaaaagaaagatgcagaaattcgagat
tataaagaaagtggatcaaaagtttccagaccatatttggaaacttcagaatttgattca
gaagcttttcggaaagatgtaagacagacttcagaatatgtaagtgcaattatcaaagat
agttttatgattgccactgatgattccataaatctgaaactagttgatgtggaagcggac
gcaaaaagtcctccatccataagtaactcatcttctttatcaggagttgcaaatacagat
tctcctgtgaaaagagcaacagctaaaatagttggacacaagaagaacaaaatcattcgg
ggaggacgaagacaaccaatgggggtcgaagttttgtctgattctgatagcgatgtagat
gcaaagcctactcctccaccagtgaagagagcttcaaatcaggaaaaaaagaaggccaca
aagaagaagaaagtcattgacaagagaaaaaagctcttttga
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