Styela clava (leathery sea squirt): 120328085
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Entry
120328085 CDS
T07291
Name
(RefSeq) coatomer subunit beta'-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120328085
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120328085
Membrane trafficking [BR:
sclv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120328085
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120328085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR35_TULP_N
HEAT_GCN1
DUF5739
OsmC
UAE_UbL
Motif
Other DBs
NCBI-GeneID:
120328085
NCBI-ProteinID:
XP_039250415
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKCVDLHPTEPWMLVSLYNGNVHIWNIESQQLVKSFEICELPV
RAARFVPRKNWVVSGSDDMQVRVFNYNTLERVHLFEAHTDYIRSIAVHPTQPYILTSSDD
MMIKLWDWDKKWACSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSQTPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVVCVNFHPE
LPIIMTGSEDGTVKIWHANTYRLETTLNYGLERVWCISSLKGSNNVALGYDEGSILIKLG
REEPAMSMDGNGKIIWAKHSEIQQANLKAMSDMDTKDGERLQLAVKDMGSCEVYPQNLSH
NANGRFVVVCGDGEYIIYTAMALRNKAFGSALEFVWANDSSEYAVRESGTSVKLFKNFKE
RQSFKPDFGCENIFGGYMLGVKTTQGLAFYNWENMELIRRIEITPKNIYWSDNGDLVCLA
TDESFFILRYDQNKIAEAQENPDLVSEDGIENSFDVLGEIEEIVKTGIWVGDCFIYTNSV
NRLNYYVGGEIVTIAHLDRILYLLGYIPRDNRLYLGDKELNVVSYSLLLSVLEYQTAVMR
KDFETADKVLPSIPKEQRTRVAHFLEKQNFKVQAMAVTCDPEHKFELALGLGDMKVAYTL
AKEAESEQKWKQLAELATSKCEFGLAQECLHQAQDYGGLLLLATAAGNSNMVKKLAEGAE
SGGKNNVAFLSYFVSGQKQKCLDLLLNTNRLPEAAFFARTYMPSEVPRIVGLWKENLAQT
NKKAADSLADPKQYENLFPQMAESLVAEKYLQSTEKTRPANHYLQTPSNDERNILEESEG
FVDVQGEIVQEPEIEPKTDIPLIEPDEDEQEPQPAQTKVEDEPIQEEEPAVEPSQQSEQK
VSTDAYLPSLDDLDLDIENLVLDDDIDTSGINLDDELLED
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagacttgacatcaagaggaagttgagtgctcgatctgatcgtgtcaaatgt
gttgatttacatcctacagaaccatggatgcttgtttcattgtacaatggtaatgttcat
atttggaacatcgaatctcaacaacttgtaaaatcatttgaaatatgtgaattaccagtg
agagctgcaagatttgttccaaggaaaaattgggttgtgtcaggatcggatgatatgcaa
gttcgagtgttcaactacaatacattggaaagagttcacttatttgaagctcatactgat
tatataagatcaattgctgttcatccaacacaaccatatatattaaccagcagtgatgac
atgatgataaagctctgggattgggataagaagtgggcatgttcacaagtatttgaagga
catactcattatgttatgcagattgtgataaatccaaaggacaacaaccagtttgctagt
gcatcgctagacagaacgataaaggtttggcagcttggttcacaaactcctaatttcaca
cttgaaggacatgaaaaaggagtgaattgcattgattactacagtggtggagataaacct
tatctaatctctggtgctgatgatagattggtaaagatatgggattatcaaaacaaaaca
tgtgtacagacattagaaggtcatgcacagaatgttgtttgtgtcaattttcatccagaa
ttgccaattattatgactggatcagaggatgggacagtaaagatctggcatgctaacaca
tatagacttgaaacaacactcaactatggattagagagagtttggtgcatttcgtctttg
aagggatcaaataatgtagcactaggttatgatgaaggaagcattctcattaaactcgga
agagaagaaccagcaatgtccatggatggaaatggaaaaattatttgggcaaaacattct
gaaattcaacaggcaaatttaaaagccatgtcagatatggatacaaaagatggtgaacga
ttgcaacttgctgtaaaagatatgggaagctgtgaagtttatccccagaatttaagccat
aatgctaatggaagatttgttgttgtttgtggagatggagaatacatcatatacactgct
atggctcttcgcaacaaagcgttcggttcagcgttggaatttgtttgggctaatgattca
tcagaatatgctgttcgtgaaagtgggacttcagtcaaattgtttaaaaatttcaaggaa
agacaatcatttaaacctgactttggatgtgagaatatattcggtggatatatgcttggt
gtcaaaactacgcaaggccttgcgttctataactgggaaaacatggaactcattagaaga
attgaaattactccgaaaaatatatactggtcagacaacggagatctggtttgtcttgcg
acagatgaatcgttctttattctgcgatacgatcagaataaaattgcagaagctcaagaa
aatcccgatctcgttagtgaggatggaattgaaaattcgtttgatgttctcggtgaaatt
gaagaaattgttaaaactggaatatgggtcggtgattgctttatttatacaaattcagtg
aacagactcaattattacgtcggaggagaaattgttaccattgcacatttagacaggatt
ctgtatttgctgggttacattcctcgagataatagattgtatttgggagacaaggaattg
aatgtggtgagctactccctgctactgtccgtacttgaatatcaaactgctgtcatgaga
aaagatttcgaaactgcagataaagttttaccgtccattccaaaagaacaacgcaccagg
gtcgcacatttcttggaaaagcagaatttcaaagttcaagctatggcagtcacatgtgat
ccagaacataaattcgaacttgcgctgggactcggtgacatgaaggtcgcctacactctt
gctaaagaagctgagtccgaacagaaatggaagcaacttgctgaacttgcaacatcaaaa
tgtgaatttggtttggctcaagaatgtcttcaccaagcacaggattatggtggattgttg
ttgttggcaacagctgcaggaaactcaaacatggtgaaaaaattggcagaaggcgctgaa
tctgggggtaaaaacaacgttgctttcttgtcttattttgtttcgggacaaaaacagaaa
tgtttggatctgttgttaaatacaaaccgtcttcccgaagctgctttcttcgctagaacg
tacatgccaagcgaagtaccaagaattgttgggttgtggaaagaaaatctagcgcagaca
aataaaaaagctgccgattcactcgctgatccaaaacaatatgaaaatttatttccacaa
atggctgaatcccttgttgctgaaaaatatcttcaatccacagagaaaacaaggccagca
aatcattatttacagacgccgagtaatgatgaacgtaatatattggaagaatcagaagga
tttgtagatgtacagggtgaaattgtgcaggaaccagaaattgaacccaaaacagatatt
ccattaattgaaccagatgaagatgaacaggaacctcaacctgcccaaactaaagtggaa
gatgagccaatacaggaagaagagcctgctgtcgaaccttcacagcagtctgaacaaaag
gtttcaacagacgcatatctcccatcactagatgatctggacctagacatagaaaacctt
gttttggatgatgacattgatacatcgggcattaacctcgacgacgagctgctggaagat
tga
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