Styela clava (leathery sea squirt): 120328134
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Entry
120328134 CDS
T07291
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120328134
Enzymes [BR:
sclv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
120328134
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Other ribosome biogenesis factors
120328134
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
FtsJ
Methyltransf_31
Fibrillarin
GCD14
Motif
Other DBs
NCBI-GeneID:
120328134
NCBI-ProteinID:
XP_039250477
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MYLHKSGLEMALYKTASGVLKSIEEKQGSVKSLVIASKYKNVKQLYALVVETLKYKDVLM
EIINKTKLMQGTHISKYEALVLSHDFLFGRGVQCGGRYKKIIHSRKSQLNSALTMMKVKR
KVKSNEDLLQKDLKDAINLPKYLRINTLLTSKDDAVEYFKKIGYTLVASRSPHQLQKNEF
MIDSVIPYLLVFHPRTDLHNDRLYKGGEIIFQDKASCLPAYILSPTNGSVVIDACAAPGN
KTSHMAAIMSNRGKIFAFDLSPQRLSTMDSMLLKAGVLCCQTKVQDFLKVKHDDPQYCKA
TEILLDPSCSGSGIVNRLNSLTNDDKSSSESRLQSLANFQSQALDHALLFPKVNKVVYST
CSIHTIENEKVVMKALEKHPHFELVHVLPEWQNRGLPIDGFEVEAKKCIRCTPEHDQTNG
FFVALFQRKS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtacttgcacaaatcaggattagaaatggctttgtataaaacggcatcaggcgtcttg
aagagcatcgaagaaaagcaaggatctgtcaaatctctcgttattgcatccaaatataag
aatgttaagcagctatatgcacttgttgttgaaacactcaaatataaagatgtactgatg
gaaatcatcaacaaaaccaagcttatgcaaggaacgcatatatcgaaatatgaggccttg
gttctatcacatgactttttatttggacgaggtgttcaatgtgggggaagatataagaag
attattcactcaagaaagtcacagctaaattctgcattgactatgatgaaagtaaaaaga
aaagtgaagtcaaatgaggatttgttgcaaaaagacttgaaagacgctatcaatcttcca
aagtatttaagaatcaatacattgctaacctcgaaagatgacgctgttgaatatttcaag
aagattggttatactctcgtcgcatcaagatctcctcatcaactacagaaaaatgaattt
atgattgattctgttattccatatctgttggtttttcatccgagaactgatttacataat
gatagattgtataaagggggtgaaattatatttcaagataaagcaagttgtttacccgct
tatatattatcaccaactaatggttctgtagtaattgatgcatgtgcagctcctgggaat
aaaacaagtcatatggctgcaattatgtccaacaggggaaaaatttttgcattcgattta
agccctcaaaggttaagtacaatggactctatgttgcttaaagcaggagttttatgctgc
caaacaaaagtgcaagattttttaaaagtcaaacatgatgatccacaatattgcaaagca
acagagattcttcttgacccatcttgttcaggatctggaattgtgaataggttaaattca
ctaacaaatgatgataaatcaagttcagaatcgcgacttcaatcattagccaattttcaa
tcacaagctctggatcatgctcttctatttccaaaggtcaataaagttgtatattctacg
tgctccatacacaccattgagaatgagaaagttgttatgaaagcattggagaaacatcca
cattttgaattagtacatgtattgcctgaatggcaaaatcgaggtttacctatagatggc
tttgaagtggaggccaagaagtgtataaggtgcactccggaacatgaccaaacaaatgga
ttttttgttgccctattccaaaggaaatcatga
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