Styela clava (leathery sea squirt): 120328154
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Entry
120328154 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120328154
KO
K06054
hairy and enhancer of split 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03460
Fanconi anemia pathway
sclv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120328154
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120328154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120328154
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120328154
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120328154
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
120328154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
120328154
NCBI-ProteinID:
XP_039250505
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MQPNEMVDESQQGEEIDSSGSACGDNPKSSKPMMEKRRRARINNSLNELKTILLEALKKD
TTRHSKLEKADILEMTVKYLRRLERQRVTAIRMNPAVVNKYKAGFNECRNEVTKFLSTHE
GVAVDVRTRLLSHLETCQESLQDQDQDFSCDEFADQPMSWMTSPMQSDDQTSPNPKSPAT
KISCTTLRKEDSQQIINTGKEFCGERHGAQESRFVEREFQNVICSSTITPPSSVEISSHA
KGCHADVAFILPQVGAESGFVANVPNTSSNYGRPVVFQAVPTKEIIPENEDSYRSIQTAG
PSQSGFPNAGRIVPLTTSSSNLDFAAVKYLIPFTGNEANPQNVQVPTASSIRREAVNMQC
NVETENYSTEYNYIPRENLTINATTATRQYAQTYSHSHSNYQSNKNPWRPWSHDNVS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgaatgaaatggtcgatgaaagtcaacaaggagaagaaattgattcctctgga
agtgcttgtggtgacaatcccaagtcttcaaagccgatgatggagaagagacgaagagca
agaatcaacaacagtttgaacgaattaaaaacaattctacttgaagctttgaagaaagat
accacgcgacattccaagctagagaaagctgatattctggaaatgaccgtgaaatatttg
agaagacttgaacgacaaagagtcacagcaatcagaatgaaccctgcagttgttaataag
tacaaggctggatttaatgaatgtagaaacgaagttacgaaatttctaagcacacatgaa
ggcgttgcagttgatgttcgcactcgactgttaagccatcttgaaacttgtcaagagtct
ttgcaggatcaagatcaagatttttcatgtgacgagttcgccgaccagccaatgagttgg
atgacctcgccaatgcagagtgacgatcagaccagtccaaatccaaagtcaccagcaacc
aagatatcgtgtacaactttgcgtaaagaagattcacaacaaatcattaacactggcaaa
gaattttgtggagaacgccatggtgcacaagaatcccgatttgtcgaaagagaatttcaa
aatgtaatatgtagttccacaattacgccgccatctagcgtcgagatatcaagccatgca
aaaggttgccacgcagacgtcgcctttatactaccacaagtgggggcagagagtggattt
gtagcaaacgttcctaacacaagtagtaactacgggcggcctgttgttttccaggctgtc
cctaccaaagaaatcattccagaaaatgaagattcttatcgatcgatacaaactgcaggc
ccatcacagtctggtttcccgaatgccggcaggattgttccgttaacaacttccagcagt
aacttagactttgcagcagttaaatatttaattcctttcactggaaatgaagcaaatccg
cagaatgtacaggttccaacagcatcatcgatacgccgtgaagcagtgaatatgcaatgc
aatgtggaaacagagaattactcgactgaatacaactacattccacgtgaaaatttgaca
ataaatgcaacgactgcaacaagacaatatgctcaaacatatagccatagtcattcaaat
tatcaaagtaataaaaatccttggagaccgtggtctcacgataatgtatcatag
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