Styela clava (leathery sea squirt): 120328209
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Entry
120328209 CDS
T07291
Name
(RefSeq) (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O-like isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120328209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120328209
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
120328209
Ubiquitin system [BR:
sclv04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
120328209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-C_UBE2O
SH3-A_UBE2O
DUF5106
RWD
Nop52
Motif
Other DBs
NCBI-GeneID:
120328209
NCBI-ProteinID:
XP_039250573
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MSEHSVFPNDLVFGKSRNGIVKFAVVEQVGGMDDSEESSDSEFEDLATTPLDKGFIRVTW
YPDGKDEVVKESQLQVVDRSCLPRDVVRIRNGYQLGTAIKTKVMGDIGVVGTTKILKKVN
VSEFLPIVAFQDDDMVSYGPWLGRVQLVLQKLQLKFSNGGRGKLDLENIDDEDLISDVYP
HPSDEGDFNLSPYYPGQFVRAPSKVFKNVQWISGDEIKFKPKTQYRALVTHVEIYGVQVK
WGTRAFPEDYKEKVEVNKEKVEEKPVTQEYSIENGSSVDPTPDLQHGVNHRNVAETTSSA
VIGTSVDKIPEKKEEEELKNPAEPPPALITKDELKKIYLLNHFWEGHVWLGERFRYQLNE
EQAEDLNQQVNKNIKKTKRMRMAKRMEQKLLHSTSKSSLSPSLSRKSRKRRTQASASQHD
DSSSNDDETDNSSYEDEDEQDENDENDESAIAPSGGSCASMTKEVENEIEVLVNNESDMT
ISSPIGQIPKILGVMSCRVAGFELDFTLIQESGPVPKRKFHCNIQNPECSKEIIERVSEK
FQSFMKGMLKRNKDLLNDSESCATMMSQCPQAIRTFIMQQSSSNNQEIYFEYTTGDKHTS
GMVDKDGKKTEVEFDDEIDLRTMPRDIQMISDVLDSVVAQPGDFVLTSGPVGIKQCGPNV
KYHAGQWVTIEVCRTYTTVDVQWQDGTIDCDVKSLDLLPAHHVDDNDFCPGDFVIDKRVE
EEPANHGIVIKADSQNRMIKIQWIKHGNVSEIEEVSAYEVADHPELQFRISDIVVRVSNI
HGDGTTDSLDKEHTVGELLRINEMGLLEVLWSNGSICNVHPRDVLAFNDEDEDGIFASLG
SGDDFMGSDASWMTASSDSDDDDDDLSVLSRDFDSAGDGDHPKAITNDNSNSQDANHQSG
EGFNHVHGNDEQPEIHDENHETGHENDQNEITKINIDSTDNKEINTSDPKLKGEIGEGVG
ISTGNENEAIKSKIAGISGEQDTTTLNLGEDNKDNKLKNMEDGLLFIDENHNSENAKEIQ
ENELNINQEVFVTATISSESISSNNTTVISENSDMISSFSVESSAPESHHFIKRYFDDSS
SKIFIKAIQRDLKLLRTSLSSGITVKAYEDRMDLLSVLIEGPERTPYEDGIFSFDIHLPN
NYPDSPPSVHYISFSPRLNPNLYETGRVCVSLLGTWSGKGSERWTKDSTILQVLLSIQGL
ILNGEPYYNEAGYEGHRGTAEGMKNSRCYNEMVMLRLVQHMTAVVQNPPDAFEKEVNAFC
TEHISQLLKRVRKLLDDVESSEMESDETIAAVSDVNGVENDDAKLGTSIGFPLLPLSKGV
MLSLKSRLIDLENAAKVMGHL
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacattcggtttttccgaatgatttagtatttggaaaatcaagaaatggaatt
gtcaaatttgctgttgtggaacaagttgggggaatggatgattctgaagaatcatcagat
tcggagtttgaggatttggcaacgactcctttagataaaggattcatcagagttacatgg
tatcctgatggtaaagatgaagttgtaaaagaatctcagcttcaagttgttgatcgatcc
tgtcttccacgagatgttgttcgtataagaaatgggtatcagctcggtacagcaatcaaa
acgaaagtgatgggggatataggagtagttggaaccacaaaaatattgaagaaagtaaat
gtttcagaatttttaccaatagtggcatttcaagatgatgacatggtatcatatggacca
tggttgggccgagttcaacttgttcttcaaaaacttcaacttaaattcagcaatggagga
agaggaaaattggatcttgaaaatattgatgatgaagatctcatcagtgatgtttatcct
catcccagtgatgaaggcgacttcaacttgtcaccttactatcctggacaatttgttcga
gctccttcaaaagtgttcaaaaatgttcagtggatttcaggagatgaaatcaagttcaaa
ccaaaaactcaatacagggctttagtgacacatgttgaaatatatggagtgcaagtaaaa
tggggaacaagagcatttccagaagattataaggagaaagtagaagtgaataaggagaag
gtagaagaaaaaccggtaactcaagagtattctattgaaaatggatcatctgttgatccc
actcccgacttacaacatggagtgaatcacagaaatgtagctgaaacaacttcatctgct
gttattggtacatcagttgataaaataccagaaaaaaaggaagaagaagaattaaagaat
cctgctgaacctccgcctgctctcatcaccaaggacgaattgaagaaaatctacttgttg
aatcatttctgggaaggacatgtttggttaggagaaaggtttcgatatcagttgaatgag
gaacaagcagaagatcttaatcaacaagtcaacaaaaatattaaaaagactaaacgaatg
agaatggctaaaagaatggaacagaaactacttcacagcactagcaaatcatcgttatct
ccgagcctttcaagaaagagcagaaagagaaggacacaagctagtgcatctcaacatgat
gactcatcaagtaatgatgatgaaactgacaattcatcatatgaagatgaagatgaacag
gatgagaacgatgaaaacgatgaatctgcaattgctccatctggtggatcatgtgcaagt
atgacaaaagaagtggaaaatgagattgaagttcttgtcaacaatgagagtgacatgact
atatcatctcctattggtcagataccgaagattcttggagttatgtcatgcagggttgcc
gggtttgaacttgactttacacttatccaagaaagtggtcccgttccaaagaggaaattt
cattgcaatatacaaaatcctgaatgttctaaggaaatcattgaaagagtcagtgaaaaa
tttcaaagcttcatgaaaggaatgttaaaaaggaacaaagatttgttgaatgattccgag
tcttgtgctactatgatgtcacaatgtccacaagcaatacgtacctttattatgcaacaa
tcatcttcgaataatcaagaaatatattttgaatacacaactggtgataagcacacaagt
ggcatggttgataaagatgggaaaaagaccgaggtagaatttgatgatgaaatagatcta
aggacgatgccccgagatattcaaatgatttctgatgttctggattcagttgttgcgcaa
cctggtgactttgttctaacatcgggtccagttggtatcaaacaatgtggtcctaatgtg
aagtatcatgctggacaatgggtgacaatagaagtatgtcgtacctatacaacagttgat
gtacaatggcaggatggcaccattgattgtgatgtcaaatctttagatctattaccagca
caccatgttgatgataatgatttttgtcctggagatttcgttattgataagagagttgaa
gaagaaccagcaaaccacggaattgtgattaaagctgatagtcagaatagaatgattaaa
atccagtggataaaacatggaaatgtcagtgaaattgaagaggtcagtgcatatgaagtg
gcagaccatccagaattacaattcagaatatctgatattgttgtgagagtaagcaacatt
catggagatggtacaacagattccctcgataaagaacacactgtaggtgaattactgcga
attaatgaaatgggattattagaagttctatggtctaatggctcaatttgcaatgttcat
cctagggatgttctagcatttaatgatgaagacgaagatggaatatttgccagccttggt
tccggtgatgattttatgggatctgatgccagttggatgacagcttcatcagacagtgat
gacgatgatgatgatctgagcgttttaagccgcgattttgattctgctggtgatggcgat
catccgaaagcgatcacaaatgataattcgaattcacaggatgcaaatcatcaaagtgga
gaaggatttaaccatgttcatggaaatgatgagcaacctgaaattcacgatgaaaatcat
gagacaggacatgaaaatgatcaaaatgaaatcacaaaaatcaatattgattccacagat
aacaaagaaattaataccagtgatcctaagctgaagggtgaaattggtgagggtgttggt
atctccactggcaacgaaaacgaggcgataaaaagtaaaattgctggtatatctggagaa
caggatacaacaactttaaatctgggagaagataacaaagacaataaactcaaaaatatg
gaggatggcttgctgtttattgacgaaaatcataattctgaaaatgcaaaagaaatccaa
gaaaatgaattgaacattaaccaagaagtcttcgtcactgcaacaatatcttctgaatcc
atatcttccaacaacaccactgttatttcagaaaattcagacatgatttcttcattttct
gtcgaatcatcagctccagaatctcatcattttataaaacgatattttgatgattcatct
tcgaaaattttcattaaagccattcaacgtgatttgaagttattacgtacttcactgtca
tctggtatcactgtgaaagcctatgaagatagaatggacttgttatcagtccttattgaa
ggaccagaaagaactccatatgaagatggaatattttcattcgatattcatcttcccaac
aattatcctgattcacctccgtccgttcattacatctcattctcacctcgtcttaatcct
aatttatacgaaactggaagagtttgtgtcagtttattaggcacatggagtggaaaggga
agtgaaagatggacaaaggattcaactattttacaagttcttctatcaattcagggtctg
atattaaatggtgaaccttattataatgaggcaggatatgaagggcacagaggaacagct
gaaggcatgaaaaacagtagatgttataatgaaatggtaatgttgcggcttgtccaacat
atgacagcagttgtacagaatccaccagatgcttttgaaaaagaagtgaatgcattttgt
actgaacatatatcacaattacttaaaagagtcagaaaattactcgatgacgttgaatct
tcggagatggaatctgatgaaacgattgcagcagtgtctgatgtgaatggagtagaaaat
gatgatgctaaattgggtacaagtattggatttccacttctaccattgtcaaagggagtc
atgttaagtttaaaaagtcgattgatcgaccttgaaaatgctgcaaaggtcatgggccat
ctctaa
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integrated database retrieval system
