Styela clava (leathery sea squirt): 120328252
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Entry
120328252 CDS
T07291
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 14-like
KO
K15156
mediator of RNA polymerase II transcription subunit 14
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120328252
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
120328252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med14
Med14_C
RM3_Med14
RM6_Med14
RM5_Med14
RM2_Med14
RM8_Med14
Trm5_N
Dehydratase_SU
Motif
Other DBs
NCBI-GeneID:
120328252
NCBI-ProteinID:
XP_039250622
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MHVAGMPAPVGFQQGPRPAQNGAIVPSMNAPPMGTIPLNTVIDHIIHKTYHDIVVMADLL
PGKPDMERKNDIAHFANRTRQLVIRLLAVVKWASSVGKVSKCEEITQLLDQQAMLFIDTA
DKLHTLANQLVVQARLPNFAIPAAVDVLTTGTYPRLPRAIRDKILPPDPITPLEKAATLK
RLNQIIMYRLVTTKIPLQIMELIVDKGMVKLVVPGEFQAMLTLMGDEDEVPWRLLKLEFM
VEDRETGSGRTLVHNLQVNYIHELVQSRLIANEDPIQDLYNVLHSFCLSLQLEVLQAQTV
RLIQERWGRLVQIDEYLPGVKVVLSYWRLTPYKSTKQELMTVAVHQRKTEDGAWILDVTH
KPPLILQNVNLVEKASKIRDLSFERLLSDTIKVRSFHKLYELQQMLQKHIKNDSTKISKD
LSSLIVPLIKPCQSNENLCVSIDPQTGIYVPMLTGLEQQLLDEMEKAINESPMNLLSWIP
RFRNKLARKRCKSSVQNLPAYCVDELSFANNSTHPIGQLSKDIVYIKLKNFSNFYVVVEL
IPNEEITTEVLYRYHLLTVSGGTSRPGDVGDMKADSLVQLETSLCCDEFADLKISDEDES
GDVGSHFNSELAQVVSVSNARIPFISLIHDLAKEGILHQGLMEDGIGIGLSVKIMSFPEI
PTNVLQTILSKKLVASLLECSFKLIDKSPKMSELSGTKIWIAELVFTDRPLKTESQHGFL
TRVMLSFDFSSNDSPVKLFNDEWTSILKLYEPVARFSTALKDEGSVLHHIVTVHSYNYRS
LVLKYGKSKHQLVTIKWSIQNDKFVLLFGRCSSTGSNSHTIASHYLVNQFNSNPDIGKLV
QILHDTSQPLQAICSLSSIPLIGMASNQPGGMQQNPKSVSQSFSVIIQSPSHIRLIYRST
YALDIYSLPDKKVAIRDGSLSMFDSSKVKEGMYPIVGLKSFLSLFESPGSRKRSVKEKDD
PPAPDIQSSSANSGEMRTITRGVWAGSNPVILDQDVFTGLLSSQTTTSSYTTNILEQFLG
HTLIRRELEHIIRSTPPDSPYYTPSPSLVPNPSVNEPLCTFFAANSLMFRCTMQFPGNRP
HLNLAVQQVPPLVMQEHGIPHENWQNDDLLILERFFKMRVATQPFRPSNIHAFCSIISSK
SLILRDFINVMRLELTPHQNDPTVKWIPQICLTVPPWLSYAPAGLPAVYIKDKILIFVLM
TMKNFNPANPPMNRQAHVMPIVWYLQTNIATLPAQNNPLLQRIEAHLRQYMEERRQTNTE
CHMFSAIKYLMDNFSPP
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggctggaatgccagcacctgtgggatttcagcagggcccccgtcctgcgcaa
aatggagcaattgttccttcaatgaatgcaccaccaatggggacaatacctcttaatacg
gttattgatcacattattcataaaacttatcatgatattgtcgttatggctgaccttctt
cctggtaaaccagacatggaaagaaaaaatgatatcgcccattttgcgaatcgtactcgt
cagcttgtcatccgacttcttgcagttgtgaaatgggcaagttccgtcgggaaagtttca
aaatgtgaagaaataacacagttattagatcaacaagctatgttgtttattgacactgcc
gataaactacacacgttagccaatcaactcgtagtacaggctagattgcctaattttgcc
ataccagctgcagtggatgtattaacaactggaacgtatcctcgacttcctagagcaatt
cgagataaaattttgcctcctgatcccatcacaccattggagaaggcagcaactctgaaa
agactgaaccaaattatcatgtatcgacttgtcactacaaaaattccactacaaatcatg
gagttgattgttgacaaaggaatggtcaagcttgttgtaccaggagaatttcaggctatg
cttactctcatgggtgatgaagatgaagttccatggagattactgaaattagaatttatg
gttgaagacagagaaacgggcagtggacgaactttggtgcataatttgcaagttaattac
attcacgaattggtccagtcacgattgattgcaaatgaagatcctattcaggatttgtac
aacgttcttcattcgttttgtctttctttacaattggaagttctacaagcacaaacagtt
agactaatccaggaaagatggggaagacttgtccaaattgatgaatatcttcctggtgta
aaggtcgtgctatcatactggaggttgactccttataaatcaactaaacaggagttgatg
actgtagcagttcatcagcgaaaaacagaagatggtgcatggattttggatgtgactcat
aaaccaccactcatcctacaaaatgtaaatcttgtggaaaaagcatcaaaaatcagagat
ctgtcatttgaaagattactcagtgatacgatcaaagttcgctcctttcataaactctac
gaattgcagcaaatgttgcagaaacatattaaaaatgactcaacaaaaatttcaaaagat
ctgtctagtttgattgttcctctaataaaaccttgtcagagcaacgaaaatctttgcgtt
tctatagatccacaaactggcatttatgtcccaatgctaacaggtttggaacaacaacta
cttgacgagatggagaaggctataaatgaatctccaatgaatctgctttcatggataccc
aggtttagaaataaactggcaagaaaaagatgcaaatcatctgtacaaaatttaccagca
tactgtgtggatgaattatcatttgcaaacaatagcacacatcccattggtcaattatca
aaagatattgtttatattaaactaaaaaatttcagcaatttttacgttgttgtagagttg
atcccaaatgaagaaataaccactgaagttctttatcgataccatctcctcactgtatca
ggtggtacgtctcgtccaggagatgtcggtgatatgaaagcggactcgcttgtccaactt
gagacttcactttgctgtgacgaatttgcagatttaaaaatatcagatgaagatgaatcc
ggcgacgtaggatcacatttcaattctgagttggcgcaagttgtttcggtcagtaatgcc
aggatccctttcataagcttgatccatgatcttgcaaaagaaggcatattacatcaaggg
ttgatggaggatggcataggtattgggttgagtgtgaaaataatgtcttttcctgaaatt
ccaactaatgtacttcagactattttaagtaaaaaactggttgccagcctccttgaatgc
agcttcaagctcattgataaatcacccaaaatgtcagaactatcaggtactaagatttgg
attgctgaactcgttttcactgatcggccattgaaaacagaatctcaacatggctttctc
actcgggttatgctgagttttgatttctcttcaaatgactctcctgtcaagcttttcaat
gatgaatggacttcaattttaaagttatatgaaccagtggctcgtttttcaacagcttta
aaagatgagggtagtgttcttcaccacattgtaactgttcattcttataattatcgcagt
ttagtactcaaatacggaaaatccaagcatcaacttgttactatcaaatggtcaatccaa
aatgacaagtttgttttgctatttggaaggtgtagttctacaggatcaaacagtcatacc
attgcctctcactatttggtgaatcaattcaattctaatccagacattggaaagttggtg
caaattttacatgacacatcacagccattgcaagcaatatgctctctttctagtatcccc
ttaattggaatggcatcaaatcaacccggtggaatgcaacagaatccgaagagtgtatca
cagagcttctcagttattattcagtctccatcacacataagactgatttaccgatcaacc
tatgcgttagatatctactctctgcctgacaaaaaggtcgcaattagggatggatcgctt
tctatgtttgattccagcaaagtaaaagagggaatgtatccaattgttggtttaaaatca
tttttatctttgtttgagagtccaggatctcgtaagcggtccgtgaaagaaaaggacgat
cctcctgcaccagatatccaaagttcgagtgcaaattctggagaaatgcgtacaatcacg
cgaggtgtgtgggcaggtagtaatcctgtcattttggatcaggatgttttcacaggacta
ttaagttcacaaacaactacaagttcctatactacaaatattctagagcagtttcttggt
catacgctaatacgaagagagttggaacatataatacgatctactccaccagattcacca
tattatacaccttctccgagtcttgttccaaatccatctgtgaatgaacctctctgcaca
ttttttgccgcgaattctcttatgttccgttgcacaatgcagtttcctggaaaccgtccg
cacttgaatcttgctgttcagcaagttccacccttagtcatgcaagaacatggaattcct
catgaaaactggcaaaatgatgatcttcttattttagaacgcttttttaaaatgagggtt
gctactcagccattccgtccaagtaacatacatgcattctgcagtattatatcatccaag
tcgcttattctgcgagatttcatcaatgtgatgcgtctggaactgacaccacaccaaaat
gatccaacagtgaaatggattccacaaatatgcctgactgtgcctccttggttgagttat
gctccagctggacttcccgctgtttatatcaaggacaagatactgatatttgtcttgatg
acaatgaagaatttcaaccctgcaaatccacccatgaacaggcaagcacatgtgatgcct
attgtttggtatctacaaactaacattgcaacattgccagctcaaaacaacccactctta
cagcgaattgaagcacatctgaggcaatacatggaagagagaagacaaacaaacacagag
tgtcatatgttcagtgccattaaatacttgatggacaacttctcaccgccttga
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integrated database retrieval system
