Styela clava (leathery sea squirt): 120328502
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Entry
120328502 CDS
T07291
Name
(RefSeq) zinc finger protein castor homolog 1-like
KO
K25209
zinc finger protein castor
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120328502
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120328502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
120328502
NCBI-ProteinID:
XP_039250945
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MSSRRKGKPVRCIDMICGKLSGGSSGTLTTPVSQVDNINDETEDSLSPEVTDETTNGSSS
PVGQGEMNASEADTNCMESELKVDNIMDNIGNIQRTTLTATNPPEGVYILQPESVSDDEE
MRTMEHPDNKSSRKRSHEDYEEENINDRMESPHDFTQQNDGMDEQCPGLDLSVKRPRIDG
TSIDSYNDFEKMNNMTPHSQSTSPNLFLDQPITSTTTENNEQLEKYHRLMKLVEQQKPLQ
QAMDEVGLSVHEFFALHRLNNQLTSARLEQREEENDAKLSSAPPTISTSSFEKFSNQGQS
MDDDWMSGKAQHDAKIQALLKETSEDVIQQQKQGTLSEAQKLNNSRLQQQPSMVMSSLQD
SSVDDRQTALRNFFLKAQGMYSQGTPTKGMMDSLNSTSISPSMLDRTSMSANDSITAGTV
SSGVGSIKKGTLDPSNFDEVVFDQYIAKFTNMNRCGLLTCQYYTRDHYHCVVEDCNYLRF
TNKADVIRHYNMHKKRDNSLAHGFLRFSPTEDCSTKYPDCHLNGKSTHYHCMQPDCNKVY
TSTSDVMTHENFHKKYMQFVCSGFKRFRATEQCDLDTCTFRDQKTTHFHCTRNDCNFTFK
NKCDIEKHKTYHLRDDQYISKGFKKFFKNEACSINDCVWNYTANHFHCLRPGCNFSFTST
SQMESHKRKHERNEYLGDDTAQSRSAQNSPKMPMFNPAMFQEAARKILSIMPPASLPHMI
SASHLSPQLTAIKSEPSTHYGIPTTSNSGPASPITPLNSRNFQGSYNTPIPKPMMKEEPA
WILPPNYEDASHAPSSPSTTQSLPRLEDKQVVTSKTVMSVLSDPDSNWGRGSGVISPSMA
ISAAAALNPSVTHTDVKISDFSSKPAYEHDRESVSTDDNTVANTRPPALEKIEPMSPFVD
IKMNAVSKFFTGVDAYKCWISDCDFLTKHHFHCLIENCEAMFTSQEKVIRHAKFHENLES
MGATLPIQNVKPSSSLGIKPVVDRSLSDPPPGYIALQSGMTKQNLTVPEYSKSPPPTNPA
SPPKRERRSSDDMQPMMNNPQQSIISQYAATGLQYSNANFQSLASQIYANALLKSQMTSL
TEQPLSSTPVPAYRLLQNPATLSALMARMSQAASATESSDQELRRSIFPTHKNDSGYVHI
KDGMACMRPDCKYAGQNHWHCTMNRCRYVCKSLGKAQTHRQAHDSLDAYARSAKQCFRSY
SVKKQCPNPNCEYRLRGHYHCLKPGCTFATIGTSKLPWHMKKHEKIARREASGFKYYTKK
EHCNHSDCKYNGLFSHYHCVRRGCTFAFQYKHQMSTHVRKHLRRMLGRTYAEGEDVQNID
HTNVDSGDDSLPLIIDEVEEAEQRPGSGIVDDAREREQLSQQQMDVLERMTQQMKSSYAA
VAAAQQDLASENTERDESINTDLPRKLPENIENDESNSDDLSVEHYEALDLSSFAAGSSK
SNDSSEQQRHLDIDSMNEDSMSNGHGNMTDEGNMDTENDEGGFQTPSNQSPNAKISPNES
QCFTKFKLSDGVLEGFKRFEATDNCGDEKCTYTFKVSHYHCTRENCNYRFTGRSHMFKHK
QHHDRVAGLVRDDFKRFKATQLCEDEQCEFRAKNTHFHCLRCDFKCTDSAKVGTHRRQHM
KADALEQSGFQRVRGKDDCGREDCKYRCRSMSHFHCLQPGCNYTIVGLTGIELHAEKHKR
GLLHRTSSLPNDNTNLIMQNLTAFRNMQQRLLNASQVQNGIDDGGMAHNLSLQTLAAFRN
MQNQYESSEQQAPSPPHIENENGHSSETSPVPQNEQGHLLSKFAFLSSAAPSQGPISAAS
SPVSSMVTEGVGS
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcgacggaagggaaaacctgtgcgatgcattgatatgatatgtggcaagctg
agcggagggtcaagtggtacgcttacgacgcctgtttctcaggtcgacaacataaatgac
gaaacggaagactcgttatctcccgaggtaacggatgagacgacgaatggttcaagttcg
cctgttggccagggagagatgaatgccagcgaagcagatactaattgtatggaaagtgaa
ctgaaagtagataatattatggacaacattgggaatattcaaaggacgaccttaacggct
acaaatcctccagaaggtgtgtatattcttcaacccgaaagcgtgagtgatgacgaggag
atgcggaccatggaacatccagacaataagtcaagtagaaagaggtctcatgaagactac
gaagaagaaaatattaacgatagaatggaatcaccgcacgattttactcagcaaaatgat
gggatggatgaacagtgtcctggtctagatttgtctgtgaaaaggcccagaattgacggc
acatcaatcgattcgtacaacgattttgaaaagatgaacaacatgacaccacattctcag
tctacctcacctaatttatttctcgatcaaccgattacatcaacaacaacagaaaataat
gagcaattggaaaaatatcaccgacttatgaagttggttgagcaacagaagccattgcag
caagccatggatgaagttggattgtctgttcatgagttttttgctcttcatcgacttaac
aatcaacttacatctgcaagattggaacaaagggaagaggaaaatgatgcaaagttgtca
tcagcaccacctactatttcaacatcttcatttgagaagttttcaaaccaaggccaaagc
atggatgatgattggatgagtggcaaagcacaacatgatgcaaaaattcaggccctcttg
aaggaaaccagtgaagatgtcatccaacagcaaaagcagggaaccctcagcgaagctcaa
aaactcaacaacagtagattgcaacaacaaccatccatggtaatgtcatctttacaagat
tcctctgtcgatgaccgccaaacagcattgagaaatttttttttgaaagctcaaggaatg
tactctcagggaactcctaccaaaggaatgatggatagtttgaactccacttccatctca
ccatctatgttagatagaacttcaatgtctgccaatgacagcataactgctggaacagta
tctagtggagttggatcaatcaagaaaggtactctcgacccgtccaatttcgatgaggta
gtgttcgatcaatatatcgctaaatttaccaatatgaatcgatgtggacttctcacttgc
caatactacactagagatcattatcactgtgtcgtagaagattgtaactacctgcgtttc
accaataaagcggatgtgattagacattataatatgcacaagaaacgcgacaactcgctt
gcacacggcttccttcgattttcgcccactgaagactgttcaactaaatatccggattgt
cacctaaatggaaaaagtactcattatcactgcatgcagcctgactgcaacaaagtttac
accagtacatctgacgtaatgactcatgagaattttcacaagaaatacatgcaattcgtc
tgtagcggttttaaacgctttcgagctactgaacaatgcgatctagatacttgcactttc
agagatcaaaaaacaactcactttcattgcactcgcaatgactgcaattttaccttcaag
aacaaatgtgacatagaaaaacataagacttatcatttacgagatgatcaatacataagc
aaaggattcaagaaatttttcaaaaatgaagcttgcagcattaacgattgtgtttggaac
tacactgcaaatcattttcattgcctcagaccaggatgtaacttttcattcacttcgaca
agtcaaatggaatcacataaacgaaagcatgaacgcaatgaatacctaggcgatgataca
gcacaaagtaggagtgcccagaactctccgaaaatgccgatgttcaatccagcaatgttt
caagaggcagcaagaaaaatcttgtctattatgccaccagcctctctacctcacatgatc
agtgcctctcatctgtctcctcaactcacagcaattaagtccgaaccttcaactcattat
gggattccaactacttcaaactctggacctgcgtctcctattactccattaaatagcaga
aattttcaaggcagttacaatactcctattcctaaacctatgatgaaagaagaaccagct
tggatattaccacctaattacgaagacgcttcacatgcgccttcttcaccctctacaact
cagagcctacctcgattggaagacaagcaagttgtaacatcaaagactgtcatgtctgta
ctctctgatcccgattctaattggggcaggggttctggagttatttcaccgagtatggca
atcagtgctgcagcggcattaaatccatcagttactcatactgatgtaaaaatttcagat
ttttcttcgaaaccagcatatgaacatgatagggaaagcgtttctacagacgacaatact
gttgccaacactcgcccgcctgctcttgaaaagattgaaccaatgagtccattcgtcgat
atcaagatgaatgctgtatcgaaattctttactggggttgatgcttacaaatgctggatt
tctgattgtgactttttaacaaaacatcattttcattgtttgattgaaaactgtgaagct
atgtttacaagtcaagaaaaagtcatcagacatgcaaagtttcacgaaaatttagaatca
atgggagctacgcttccaatccaaaatgtaaaaccaagctcttcactgggtattaaacca
gtggtggatagaagtctttccgacccgccaccagggtacattgctttacaaagcgggatg
acaaaacaaaatcttactgtaccagagtacagtaaatctccaccacctaccaatccagct
tcaccaccgaagagagaacgtcgcagcagtgatgacatgcagcctatgatgaataaccca
cagcaatctatcatatctcagtatgcagcgactggtttacaatattctaatgccaatttt
caatctctggcttcgcaaatttatgccaacgcacttttgaaaagtcaaatgactagctta
actgaacaacctctctcctctacaccagtaccagcatataggttgcttcaaaatccggca
actctctctgctctcatggcaaggatgagtcaagctgcttctgcgactgaatctagtgat
caggaattgagaaggtcaatttttcccactcacaaaaatgacagcggatacgtccacata
aaagatggaatggcatgtatgaggccagattgtaagtacgcaggtcaaaaccactggcat
tgcacaatgaaccgatgtcgatacgtttgtaaatctcttggaaaagctcaaactcatcgg
caagctcatgatagtctggatgcttatgctagatctgcaaaacaatgcttcagaagctat
tctgtgaagaaacaatgtcctaatcctaattgcgaatatagacttcgcggacattaccat
tgcctcaaacctggatgcacttttgctacaatcggtacttctaaattaccctggcacatg
aagaaacatgaaaaaatcgcaaggcgtgaagcaagcggtttcaaatactacactaaaaag
gaacactgtaatcattccgattgcaaatacaatggattgtttagtcattatcactgtgta
agacgtggatgcactttcgcttttcaatacaaacatcagatgtcgacgcatgtcagaaag
caccttcgaagaatgcttggaagaacctacgcagaaggcgaagatgttcaaaatattgac
catactaatgttgattctggtgacgacagtttgcctctcattattgatgaagttgaagaa
gctgaacaaagacctggatctggaattgttgatgatgctagagaaagagaacagctcagt
caacaacaaatggatgttttggaaagaatgactcaacaaatgaaatcgtcttacgcggct
gtagctgcagctcaacaagatctagcttctgaaaatacagaacgtgatgaatctatcaat
accgatcttcctagaaaattacctgaaaatattgaaaatgacgaaagcaattcagatgat
ctgtctgttgaacattacgaagctcttgatctaagttcatttgctgctggatcttcaaaa
tctaacgattcttctgaacaacaacgacatttggatattgattcaatgaatgaagactcg
atgtctaacggacacggaaatatgacagatgagggaaatatggatacagaaaatgatgaa
gggggatttcaaacgccttcaaatcagtctccaaatgccaaaatcagcccgaatgaaagc
cagtgtttcaccaaatttaagctttctgatggagtattggaaggtttcaaaagatttgag
gcaacagataattgtggagatgaaaaatgcacatatactttcaaggtgtcacattatcac
tgtactcgtgaaaattgcaactaccgtttcactggacgttctcacatgttcaagcataag
caacatcacgatcgcgtagctggacttgttcgtgatgatttcaaaagatttaaagccact
caattatgtgaggacgaacaatgtgaattcagggcaaaaaatacccatttccattgcttg
agatgtgacttcaaatgtacagacagtgccaaagttggtacccacagacgtcagcatatg
aaagcagatgctctggaacaatctggatttcagcgagttcgaggtaaagatgattgtgga
cgtgaagattgcaagtacagatgtcgaagcatgtcacatttccactgcttgcaaccagga
tgcaactacactattgttggacttactggtattgaactccatgctgaaaaacacaagaga
ggattgcttcatcgtacttcaagtcttccaaatgataacaccaatctgattatgcaaaac
ttgactgcatttcgaaacatgcaacaaaggttgttgaatgcctctcaagtccaaaacgga
atcgatgatggaggcatggcccacaatctaagcttgcaaacgctagcagcatttcgtaac
atgcagaatcaatacgaaagctccgaacaacaagctccatctccaccacatattgaaaat
gaaaacggacactccagcgaaacttcaccagtgcctcaaaacgaacaaggacatttgctg
tccaagtttgctttcttgagttctgctgctccatcgcaagggccgatctcggctgcttct
tcccctgtctcgtcaatggtgactgagggtgtcggatcataa
DBGET
integrated database retrieval system
