Styela clava (leathery sea squirt): 120328573 Help Entry 120328573         CDS       T07291                                  Name (RefSeq) collagen alpha-2(IV) chain-like   KO K06237   collagen type IV alpha Organism sclv  Styela clava (leathery sea squirt) Pathway sclv04382   Cornified envelope formation sclv04512   ECM-receptor interaction sclv04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sclv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120328573  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     120328573  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     120328573  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sclv04147]     120328573    00536 Glycosaminoglycan binding proteins [BR:sclv00536]     120328573 Exosome [BR:sclv04147]  Exosomal proteins   Exosomal proteins of other cancer cells    120328573 Glycosaminoglycan binding proteins [BR:sclv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120328573 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  120328573 NCBI-ProteinID:  XP_039251035 LinkDB All DBs Position Unknown AA seq 1752 aa AA seqDB search MRKSILFIVIIGIICIQEATARKRKRNIKGPCAGRDCRNLGPCSFCVSEKGNRGFPGRQG DVGTTGPPGFPGPEGLSGPKGEKGYPGRIGARGQSGSRGETGAPGYAGVNGLPGHPGEQG PVGHPGLDGCNGTEGDLGPRGEAGPPGLPGPVGRDGAPGEKGEPAYVDDASMIKGASGED GPIGPEGRPGIQGPVGQMGPMGYDGPPGPPGPPGRKGQKGDEGNEGIGYQGEKGEKGSIG TAGGRPDFLERNPPGFTQPLKGLPGRNGSKGYKGEKGDIGFPGFVGPPGFDGMQGETGEK GVRGPAGPRGPSGVPGVNGFNGRKGEPGDDGRPGTDGAQGLKGERGVPGSEGIPGFRGLD GLDGPSGPPGFPGPEGERGIRGETGIPGLDGQSGLHGEKGERGNRGPAGSPGDSVQGEKG RTGLKGLDGLDGVPGPAGLPGDKGSRGDVGAPGRSVKGESGKDGMDGLPGLRGLQGPRGR PGESGKLIYDGENIVGETGPTGDVGAKGAKGLKGEMGPTGLMGMKGDHGGECDCADAVGE RGDPGSRGPPGYPGRNGLPGIPGREGERGPPGENGAMGTPGDLGPRGFSGIPGPPGRKGE PATGDIFKAQKGEQGVPGGQGPPGLDGLPGRAGGIGGPGARGEKGELGPIGKPGKPGPQG SDGERGNPGRPGRDVEGTPGARGLKGESGRPGLPGITGYPGKQGPPGEALEVEVPRGEKG LMGLPGPPGLPGSKGDTGDMGRPGVDGLAGVVGESGEPGPPGLPGLPGPKGFPGETGDKG GPGPPGRDGYDGDYGVPGPPGEKGVKGERGVSDIRGRTGGEGPKGNPGKGGGKGPVGEPG TPGEPGKMGADGKPGPDGEPGLIGPAGRLGPPGQKGESAFEGRPGDRGPTGPRGPPGLIG VTGPKGEIGGAGPPATGKFKGMKGFPGLPGKYGEKGFTGPPGQAGEPGRPGFEGFPGPNG MMGVIGSVGLPGPPGKMGQKGSYGPEGPKGDTGREGIPGDVGGRGDVGSKGPKGEKGQPG EALNVTIVGQLMASKHGEPGAPGERGLPGLPGMIGMTGKKGEEGDPGKKGEPGEAGPSTG GLPGRPGLDGLNGEDGETGEPGLPGLIGESGEKGDVGRPGPNGLPGPSGETGQPGRDGPE GSPGLAGLDGLNGMNGDKGTKGRPGLSGIVGISGMPGTRGIRGDRGFTGPPGTPGEKGMV GFPGRNGIDGLNGRTGLSGPTGTKGEKGDAGISGLDGLDGTDGTNGPKGRPGFSDVPGPA GSIGLPGLQGPPGESGLPGLSGSQGRQGDRGDVGLPGLGGRQGFPGDAGLPGFPGEKGEA GLNGRQGLPGPPGPPGPEGEIGLPGNAGERGMRGMNGNPGLPGRDGRPGSPGESGSPGDI GERGDKGMKGMSGLTGIQGPDGAKGNAGLQGQIGRPGFPGRPGERGDAGPPGRSLEPENV PPGPKGEKGRRGLPGLMGLEGEPGPSGIEGFKGEPGIPGRNGINGIPGPRGERGSDGPTG LTGPQGPAGLDGARGTKGRTGKPGKFRPAGHLIVRHSQTVDVPTCPGGTSKLWSGFSMLY LSGSERAHGQDLGSTGSCLRRFNTMPFLYCNVNEVCNYASRNDKSYWLATTLPIPMMPVE TGLEEYVSRCTVCESQSIAMAFHSQSDMIPDCPNGWKGLWFGYSFVMHTASGADGSGQSL SSPGSCLEDFRATPFIECNGARGHCFFYNNQFSYWLTTISKEEQFTSPKKETLKAGNLRT RVSRCQVCAKVL NT seq 5259 nt NT seq  +upstreamnt  +downstreamnt atgcggaaatcaatattattcatcgtaattatcggaatcatttgcatacaagaagccact gcgagaaaacgcaaaaggaacatcaagggaccgtgtgctggacgtgactgtaggaaccta ggaccatgttctttctgtgtttcggagaagggaaatagggggtttcccgggagacaagga gatgttggaacaaccggacctccaggatttccaggcccagagggtttgtcaggtccgaaa ggagaaaagggttatcctggtagaattggagcgaggggacagtctggaagcaggggagaa accggtgcaccgggatatgcaggagtcaacggattgcctggacatcctggagaacaaggg ccggtaggacatccgggacttgatgggtgtaacggaacggaaggagatctgggtcctcgt ggagaagccggaccacctgggctaccaggacctgtgggtcgggatggcgctcctggcgaa aaaggtgaacctgcatatgtcgatgacgcttctatgatcaaaggagcctcgggagaagac ggccctattggcccagaaggaaggcctggcattcagggcccagttggacaaatgggcccc atgggatacgacggtccgcccggaccccctggccctcctggtcgaaaaggacaaaaggga gacgaagggaatgaagggatcggttatcaaggagaaaaaggagaaaagggatccattggt accgccggaggacgacctgattttcttgaacgaaatccacctggcttcacacaacctctc aaaggacttcctggtagaaacggaagtaagggttacaaaggagaaaagggagacattgga ttcccaggatttgttggaccaccgggcttcgatggcatgcagggtgaaacaggagagaaa ggtgttcgggggcccgcagggcctcgtggaccttctggcgtgcccggagtgaatggcttc aatggaagaaagggagaacctggggacgatggaagaccaggaactgatggtgcacaaggt ctaaaaggcgaaagaggggtaccgggatctgaaggaattcctggattccgcggacttgat ggtctagatggcccatcagggcctcctggtttcccaggtcccgaaggagaaagaggaatc aggggagaaacaggcattcccggacttgatggccaatctggtttgcatggggaaaaaggc gaacgaggaaaccgtggaccagcagggtcaccgggtgacagtgtgcagggggagaaagga agaactggactcaaaggacttgatggacttgacggtgtgcctgggcccgctggtttgcct ggtgacaagggttctcgaggagatgttggcgctccagggcgatcagtcaaaggcgaaagt ggcaaagatggaatggacggtcttcctggtttacgtggtcttcaaggacctagaggtcgt cctggtgaatcaggaaagctcatttatgacggtgaaaatatagttggtgaaactgggcct acgggagatgttggagcaaagggtgcaaaggggttgaaaggtgaaatgggacctacggga ttgatgggcatgaaaggtgatcatggaggagaatgtgactgcgcagatgccgtgggtgaa cgaggagaccccggttcaagaggacctcctggatacccaggtcgcaatggccttcctggt ataccaggaagagaaggggaaagaggaccacccggtgaaaatggtgcaatgggaactcct ggagacctaggacctcgaggtttttcgggcattcctggacctcctggaagaaaaggtgag cctgcaactggtgacatattcaaagcacagaaaggggagcaaggtgttccagggggacag ggtcccccaggactggatggtctacctggacgagctggtggaattggtggtcctggagct agaggagaaaagggagaactaggacccataggaaaacctggcaagcctggccctcaaggt tcggatggcgaaagaggaaaccctggtcggcctggacgggatgttgaaggaacacctgga gccagaggtttgaaaggagagtctggacgtccaggtttacctggtataactggatacccc ggaaaacaaggcccacctggtgaagcgttagaagtagaggtgccgaggggggaaaaggga ttgatgggtctgcctggcccaccggggttaccaggatcaaaaggagacacgggtgacatg ggaagaccaggtgttgatgggttggcaggagtagttggtgaatctggagaaccagggcct ccggggctacctggcctcccaggacctaaaggcttccctggggaaactggtgacaagggt ggtccaggaccacctggtcgagatgggtatgatggtgattatggggtccctggccctccg ggagagaaaggagtaaagggagaacgtggtgtttcagatattcgaggaaggacaggagga gaaggtccaaagggtaatcccggtaaaggtggagggaaaggccctgttggtgaacctggt acaccaggagagccaggcaaaatgggtgcagatggcaagccaggaccggatggagagccc ggcttaataggaccagctggaagactaggaccgccaggacaaaaaggagaatctgctttt gaaggccgacctggagacagagggcctactggcccacgtggccctcctggattaattggg gtaacaggtccaaaaggagagattggtggggccggccctcctgccactggtaaatttaaa ggaatgaaaggattccctggactgcctggaaaatatggtgaaaaaggtttcacaggcccc ccaggacaagctggagaaccaggaagaccagggtttgaaggattcccaggtcccaatgga atgatgggagtaattggctctgttggactgcctggacctcctggaaaaatgggacaaaaa ggatcatacggaccagaaggaccgaaaggagacactggacgagaaggaatccctggtgat gtggggggaagaggcgacgtcggtagtaaaggtcctaaaggtgaaaaaggtcaaccaggt gaagctttgaatgtgactattgttggacaattaatggcatccaaacatggagaacctggt gcgccaggggagagaggtttaccaggactaccaggaatgattggtatgactggtaagaaa ggtgaagaaggcgatccgggtaaaaaaggagaaccaggtgaagcaggaccatcaaccggt ggattgccaggaagacctggattggatggattgaatggcgaagacggagaaactggagaa ccagggttgccgggtttgattggagaatcaggggaaaagggcgatgttggtagacctgga ccaaatggattgcctggtccttctggagaaacaggtcagcctggcagagatggtcccgaa ggttcaccaggtctggcaggactagacggactcaatggaatgaacggggataaaggtaca aagggaagaccaggtctgtctggtatcgttggtatatctggtatgcctggtaccaggggc attagaggagatagaggattcactggccctccaggcactccaggtgaaaagggaatggta ggatttccaggtagaaatggaattgatggtttgaatggaagaactggtttgtcaggacct actgggacgaaaggagaaaaaggtgatgcaggtatttctggtctggatggactagatgga acggatggaacaaacggaccaaaaggacgcccagggttctctgacgttcctggaccagct ggaagcattggtttaccaggactacaaggaccaccaggagaaagtggattacctgggtta tctgggtctcagggacgtcaaggagatcggggtgatgttggacttcctggattaggagga agacaaggtttccctggtgatgcagggttgccaggtttcccaggtgaaaaaggtgaagca ggactcaatggaaggcaaggattgcccggaccaccaggcccgcctggcccagaaggagaa ataggattgcctggaaatgcgggagaaagaggaatgaggggaatgaatggtaatcctgga cttccaggaagagatggacgcccgggttcacctggagaaagtggatctcctggagatatt ggagagagaggagacaaaggcatgaaaggaatgtcaggtctcactggaattcaaggtcca gacggtgcaaaaggaaatgcaggattgcaaggacaaattggaagaccaggattccctggc agaccaggagaacgaggtgacgcaggaccaccaggtcgatcactagaaccagaaaatgtt cctcctggtccaaaaggagaaaaaggacgacgagggttgccaggtttaatgggattggaa ggggaacctggacccagcggtatcgaaggatttaagggagagccaggtattccaggcaga aatggaatcaatggaataccggggccaagaggagaaagaggaagcgatggacccacagga ttgactggaccacaaggaccagctggactcgatggagcacgaggaacaaagggaagaact ggaaaaccaggaaaattcaggcctgctggtcatttaatagttcgacatagtcaaacagtt gatgtcccaacatgtcctggtggaacttctaaactgtggtctgggttcagtatgctgtat ctgtccggaagtgaacgagctcatggacaagatttaggttcaacagggtcgtgtcttcgt cgtttcaacacaatgccattcttgtattgcaatgtgaatgaagtttgtaattatgccagc agaaatgataaatcatactggcttgcaacaacattaccgatacctatgatgcctgtggaa actgggcttgaagagtacgtcagcagatgcacagtttgtgaatcacaatcaatagcaatg gcgttccatagtcagagtgatatgatacctgattgtccaaatggatggaaaggactttgg tttggatacagttttgtaatgcacacagcatcaggagcagatggaagtggtcagtcgcta tcaagtccaggttcttgcctagaagatttccgagcaacaccgttcatagagtgtaatggt gctcgaggacattgctttttctacaataaccaattttcatattggctgacgacaatcagc aaggaagagcaatttacttcacctaaaaaagagactctaaaagctggcaaccttcgaaca agagtcagtagatgccaagtctgtgcaaaagtactttag

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