Styela clava (leathery sea squirt): 120328595
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Entry
120328595 CDS
T07291
Name
(RefSeq) uncharacterized protein DDB_G0284459-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120328595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120328595
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120328595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
120328595
NCBI-ProteinID:
XP_039251061
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MADVEDEDSWLYGDSTKEKSEPTDSGNTNKFAAKNEDDDEDSDDDVQVTIGEITTVELFY
RNPVPVPTKPTVTKGLDMQAPGDSTVLPVMETNIDLLDDKPWRKPGADISDYFNTGLMRY
LEAITSINKEISRTIAALDIRQGSPPVTHTVPLFIWSTDGGDPYNQYSEDRHRRPSDSET
DRHSEDDGRYRRERGSSSRRDYDRDRYRDRRDYRDSRPRDRDRDRDRDRDRDRERDRDRD
REKDRDRDKDRDRDKDRDRDRGHERESSSSRRYRDDSPSRHKSSRRKHEDDDRHSSKHKK
AKKHKHKDKDSDAPPGTDEVNGNEEVEK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtagaagatgaagattcatggttgtacggtgattctactaaagaaaaatca
gaaccaactgattcaggaaatacaaataaatttgccgctaaaaatgaggatgacgacgaa
gattcagatgatgatgtacaagttacgattggagaaatcacaactgtagaacttttctat
agaaatccagttcctgtacctacaaaacctacagtgacaaaaggcttggatatgcaggct
ccaggtgattcaacggtacttccagttatggagacaaatatagacttgcttgatgacaaa
ccatggcgcaagccaggagctgacatttctgattatttcaatacgggtttaatgagatac
ctggaagcaataacttcgataaacaaagaaatttcgaggacaattgcagccctggatatc
cgccagggttcacccccagtcacacacactgtgcccctctttatttggtcaacagatggt
ggcgatccttacaatcaatactcagaagatcggcataggagaccctcggatagtgaaaca
gatcgacatagtgaagatgatggccgatacaggagagagcggggaagtagttccagaaga
gattacgaccgtgatagatatagagatagaagggattacagagatagcagacctcgggat
agagatcgtgatcgagacagagatcgtgaccgcgatagggaaagagatcgtgatcgtgac
cgagaaaaggatagagatcgtgataaagacagagaccgagataaagatcgtgaccgcgat
agagggcatgaaagagagagcagcagttcaagaagatatcgagacgacagcccatcccga
cataaatcatcgcgcagaaagcatgaagatgatgacaggcattcaagcaaacataaaaag
gcaaaaaagcataagcacaaagataaagactctgatgctcctcctggaactgatgaagtt
aatggcaatgaagaggtcgaaaagtga
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