Styela clava (leathery sea squirt): 120328704
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Entry
120328704 CDS
T07291
Name
(RefSeq) tropomyosin, smooth muscle/fibroblast CTM1-like
KO
K10373
tropomyosin 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04814
Motor proteins
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120328704
04820 Cytoskeleton in muscle cells
120328704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sclv04812
]
120328704
04147 Exosome [BR:
sclv04147
]
120328704
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
120328704
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120328704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
XhlA
DUF1664
MscS_porin
Crescentin
DUF745
PUMA_CC
ATG16
ERM_helical
TPR_MLP1_2
DUF3450
Exonuc_VII_L
AAA_13
PspA_IM30
Uds1
CENP-F_leu_zip
DUF7518
HOOK
Cnn_1N
Spectrin
BORCS7
Nuf2_DHR10-like
Fez1
PI3K_C2
EzrA
Motif
Other DBs
NCBI-GeneID:
120328704
NCBI-ProteinID:
XP_039251170
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MEAIKKKMMMLKLDKENAMDRSEQSEVDKKSMEDKVGKLAEELLTLEKRFKATEDDLEGA
KEKLKQSQECLDSAEKKASDAEQEVNALNKKIANFEDQLESGQEKLAISQQKQEDAEKAA
DESERGRKVIENRTIKDEERLTQQEVNLKEAKEIAEDADRKYEEVARKLAATETDLERAE
ERFELAESKATELEEELKNAANNLKSLEAAAEKFSSKQVQYEDEIKTLNDRLKDSEDRAE
TAEKSVSELERTIDELEDELHSQKVRMRDVNENLAAY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatcaagaagaagatgatgatgttgaaactcgacaaagaaaacgcaatggat
agatctgaacaatctgaagttgacaaaaaatcaatggaagacaaagtcggaaagcttgcg
gaagagcttttaactctggagaaacgattcaaagcaaccgaagacgacttggagggtgca
aaagaaaaacttaaacaaagccaagagtgtctcgattcagctgaaaagaaagccagcgat
gctgagcaagaggtcaatgctttgaacaagaagattgcaaactttgaagatcaactggaa
agtggccaggaaaaattagcgatatctcaacaaaaacaagaagatgctgagaaagctgcc
gatgaaagcgaacgaggacgtaaggttattgaaaatcgaaccatcaaagacgaagaaaga
ttaactcaacaagaagttaatttaaaggaagccaaagaaatcgcagaagatgctgaccgt
aaatatgaagaagtcgcgagaaaattagccgcgactgaaactgatctcgagagggcagaa
gagagattcgagcttgctgaaagcaaagctacagagcttgaagaagaactaaagaatgct
gctaacaacttgaaatcacttgaagccgctgctgagaagttttcttcaaaacaagtacaa
tatgaggatgaaattaaaacactgaatgacagactaaaagattccgaagaccgagctgaa
accgcagaaaaatcggtatcagaacttgaaagaacaattgatgaattggaagacgaactt
cacagtcaaaaagtcagaatgcgagatgtcaatgaaaatctggcagcttattag
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