Styela clava (leathery sea squirt): 120328878
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Entry
120328878 CDS
T07291
Name
(RefSeq) PDZ and LIM domain protein 7-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120328878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
120328878
Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120328878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
DUF6288
Motif
Other DBs
NCBI-GeneID:
120328878
NCBI-ProteinID:
XP_039251371
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MDITNEFPDQAFVAEEMAHEVYVNDGPPWGFRISGGADVYKPIIISRVTPGSPASKAGLK
ANDVIVRLNGIGLQDLPRHQVEEMIVNADGTLRLMISSGIKQFQHGAPTAADPAWVALAQ
KMEKPREIGEEAAEGGLVTIGKQFGGVDKHPVHVTSSTPSIFEARRNPQAMPPNAVIPDI
RVVPDTNRCQECQKALGKEYTTVSGLNFHPRCFHCAAPNCQGRLDRGFIIEGDRPYCADC
HDKYFARPCARCGRAIVGQVYHALNHQWHLDCFKCFKCGQPFLDGIFYMEEGKLYCDTDY
KKLFSSACDTCGSDLGPGDKVVTVGPRRWHDRCFKCQRCSAGLQGKKFVRKNSLPMCQNC
AVAVK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaccaatgagtttccagaccaggctttcgttgctgaggaaatggctcacgaa
gtatatgtcaatgatggacctccatggggatttcgaatatccggaggagccgatgtttac
aaacctatcatcatatcgagagtgacaccaggatcgcctgcttcgaaagctggcttgaaa
gctaatgacgtcatcgttcgattaaatgggataggtttacaagatttgccgcgacatcaa
gtagaagaaatgatcgtgaatgcagatgggacactgcgactaatgatatccagtggcatt
aagcaatttcaacacggagcaccgacagcagccgacccagcctgggtggcgttggcccaa
aagatggaaaaaccgagagaaatcggggaagaagccgcggaaggaggactcgtcacaatc
ggaaaacaatttggtggagtagataagcacccagtgcatgtgacgagttcaactccttct
atatttgaagctagacgaaacccacaggcaatgccaccaaatgctgtcattccggatatc
cgggttgtacccgacacgaatcgatgccaagagtgccaaaaagcattgggaaaggaatat
accacagttagtggattgaatttccatcctcgctgtttccattgcgctgcaccaaactgc
caaggacgactagatcgtggatttattattgaaggagatcgaccttactgtgctgattgc
cacgataaatattttgcaagaccatgtgcaagatgtgggagagcaatcgtcgggcaagta
tatcacgcgctcaaccaccaatggcatcttgactgttttaaatgtttcaaatgtggacaa
ccattcttggatggaatattttacatggaagaggggaagctatactgtgacaccgactac
aagaaacttttttcgtccgcatgtgatacctgtggtagtgatcttgggccgggggacaaa
gttgtaacagttggaccgcgacgttggcacgatcgatgcttcaaatgccagagatgcagc
gctggccttcaaggaaagaaatttgtgcgaaagaacagtttgccaatgtgtcaaaattgc
gcagtggccgttaaatag
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