Styela clava (leathery sea squirt): 120328950
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Entry
120328950 CDS
T07291
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120328950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120328950
03036 Chromosome and associated proteins [BR:
sclv03036
]
120328950
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120328950
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
120328950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
Motif
Other DBs
NCBI-GeneID:
120328950
NCBI-ProteinID:
XP_039251470
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MPPKRKLPRDGTTQESPYSKRSRRTKPNQTDIAEKILETLKSHQKEDGSNIANSFLKVPS
KRQNPDYHETVREPIDLTRITQRMKMDEYRDIESLTADMDLLVNNAKKYYDDDSAEYKDA
NALWELYLDTKSIIMSNDAPEEQQQTVGQGSEEVMNKLDDIFNSLLAEVDDEGQGLTDMF
MLLPDSKVYPDYYQKIKDPIDLTTIGNKIQNKEYKNINDFEKDLKQLIKNARSYNEPNSK
IYNNAVALKNALQDRLQSETEIKIEKSDPGVKTSARIKQRISAKFDPDTSLKRQDAVDVP
ETSVRSSRATILHQASITDTRLKGKEALQAKLYNVIVNYRNPLGHSISDAFVRLPNKHQH
PSYYEEIENPITFKAIKKNIIAHKYKSLDEFAEDCRLLFSNAMHYNKEGSVIYKNAQTLK
QLMEDKLPENKSLEDELEDSEQDEEEEEEEEDEEEEEEEEEDVDDEEEEVEDELYEGSTP
DSKKGRKRRDSLKSKGSGQKEKPQDMFRKNLRSLYDAVLDGTYESRSMIGLFMEKPSRKD
YPDYYKLILEPIDMKTIDKKLRQDKYPTVYSLVEDFMLMFTNARHYNEPGSEVYQDADRL
QEILRKKQEEFPASEIQDDGKMTPVPVLTKEQAQRNPLLKCMDHIYQKVRNFRDPTGREI
CEIFNKLPSKSELPDYYQVIKRPMDNDKIHQKMMANSYLSLSEFMADMLLMFENACTYNE
PGSLIYKDALILQKVAVDAHDDYCIVTKQAPNIQSKVEDILINIFVSVINCQDEDGRCYS
DTLHEPAALKKGTDTPIASQEISAEPATEAMDVTNNLAPDTAEENFPKPDEDTITLDVIR
RNLHAKRYRRLDVFQEHMFHVFETARKNNRTDSEVYEDAVELQKFFIRYRDQLCKNGEIL
SSPALAYTSKILQNELDVEKQEKLPGEELEDEEGKNEGKEMREKVQLSTASDGMDVKGVT
YQAGDFVYVEDTEETSSGNHPPHIACIEKLYQDESGQQRMYGVWFFRPQETYHLQTRKFL
MKEVFKSDYYNTVPVSSIKGKCFVMIGKDYFKQKPVGYLEDDVYVCVSRYSSRMKSFKRI
KLLNLPQNNTKIINREKALVPVRVSSVYSENSKAMETPKLSDMHGPLVTDDLPWPTVVIH
KKRQNIKFDNATQENKPPVSQTFYLQYNINNLCLKVGDSVYVQQQHTGSDQRLKIARIES
MWSDANNVMWFQGSWFAQPCDTSHEPTRMFFKNEVFLLSFNSPYGDEATASMPPPTPLSW
VVGVCAVMSVRELSQCRPTEILEMHIHVCESRYLAADKFIKKIKGGSLKKPASSNKVVDD
EMYYLKKPLEISKEISPILASSVKQELREREIEFAKEKEEELRRKTMQVQQVQGVPMPQQ
YPQQMMPQPGPQRQYPAPQYQAYPQHPYQQLQQPYVAHPPQQQYMAPPNQPQVVPIQQPY
QQHQFPPGTPYVAHTQMITHHGVPSPAPQQMQPQPQMQQQYMQPPIQYTPAQPGIPPHMV
QSPMQPGMRQTNTPIDRVETPSSSTTGTPTTKKKNRGGHSTGYILFASECHPRMRAENPT
MPFGDISKLVGEEWRSQTDEKKREYEEKARELSAKAEAEGRPMQGKRRKKQQLKREMEEA
AAAAQQQQQLQQQQHPPPQPHMVVQQQQQMMLQQPYNQAQYHPGQQFQPQQGYQPSTPQQ
GTPQQYQPGQTPQMVSTPGPAPGQVYATPVNATTDQNGYSQQPGSGMRRGPLFVKPPPKV
QRVLHSEAYLRYIDSLEKGNRTISNFEKTLSVEEKDVEMSVNDMAKLPAHWLANGQGRHA
SIKSALWSLRDLMLKDALAIKNHFL
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaagcggaaacttcccagggatggcacaacacaagagtctccatatagcaag
agatctcggaggacaaagccgaatcaaactgatattgctgaaaaaatattggaaactctg
aaatctcatcagaaagaagatggttcgaatattgcaaattcttttctcaaagtcccttct
aagagacaaaatcctgattatcatgaaactgttcgagaaccgatagatttaacaaggata
acacaaagaatgaagatggatgaatacagagatattgaatcattaactgcagatatggat
ctgcttgtcaacaatgctaagaaatattatgatgatgattctgctgaatacaaagatgct
aatgcattatgggaattatatctcgatacaaaatcaatcattatgtcaaacgatgctcct
gaagaacagcaacagactgttggtcaagggagtgaagaagtgatgaataaattggatgat
atttttaattcattgttggctgaagttgatgatgaaggtcaaggattgactgatatgttc
atgcttttacctgattcaaaggtatatccagactattatcaaaaaattaaggatcctatt
gacttgacaacaataggtaacaaaatccagaacaaagaatataaaaatattaatgatttt
gaaaaagacctcaaacaattgataaaaaatgcaagaagttacaacgaaccaaactcaaag
atctataataatgctgttgcattgaagaatgcattacaagatagacttcaatctgaaact
gaaataaaaattgaaaaatcagatcctggtgtaaagacaagtgctagaatcaaacaacga
atatcagcgaagtttgatccggatacttctctgaaaagacaggacgctgttgatgtacca
gaaacaagtgttcgaagcagtcgagcaacaattttgcatcaagcttctatcacagacact
agattgaaaggaaaagaggctttacaggctaaattgtataatgtgattgtaaattatcgt
aatcctcttggacattcaatatccgatgcatttgttcgtctccccaacaaacaccagcat
ccgagttattatgaagaaattgaaaacccaatcacttttaaagctattaagaagaatata
atagctcataaatacaagtctctcgacgaattcgctgaagattgcagattactattcagt
aatgcaatgcattataataaagaaggttcggtcatctataaaaatgcacaaacactgaaa
cagttaatggaggataagctcccagaaaataaaagccttgaggacgaattggaggattct
gaacaagatgaagaggaggaagaagaagaggaagatgaggaggaagaagaagaagaggag
gaagatgtggatgacgaagaagaagaagttgaagatgaactatacgagggatctactcct
gatagtaagaaaggaagaaaaagaagagattctctgaaatcgaaaggttctggtcagaaa
gaaaaaccacaggatatgtttcggaagaatttacgatcattgtatgatgcagtgctggat
ggaacatatgaaagtcgtagcatgattggtttattcatggagaaaccgtcacgtaaagat
tatcctgattattacaagttgatccttgaaccgatcgacatgaaaactatcgataagaaa
ttacgtcaagataaatatccgactgtatattcactcgttgaagatttcatgttgatgttc
actaatgctagacattacaatgaacctggatcagaggtgtaccaggatgcagatagattg
caggagatactaagaaagaaacaagaagagtttcctgcatctgaaatacaagatgatggc
aaaatgacgcctgtccctgttttaacaaaagaacaagctcaaagaaatcccttgttaaag
tgcatggatcacatttatcaaaaagtccgtaacttccgagatcctactggacgtgaaatt
tgtgaaattttcaataaattaccaagcaaatctgaacttcctgattattatcaagtcata
aaaagaccaatggacaatgataaaatacaccagaaaatgatggctaacagttacctgagt
ttgagtgaattcatggcagacatgttactgatgtttgagaatgcttgtacatacaatgaa
cctggatctcttatatataaggatgctcttatattacagaaagtggcagtagatgcacat
gatgattattgtatagttaccaagcaagcaccaaacatacaatcgaaagttgaagatata
ttgataaatatatttgtttcggtcatcaattgtcaagatgaagatgggaggtgctacagt
gatactctccatgaaccagctgctctaaagaaaggcacagatactcctattgcatctcag
gaaataagtgcagaaccggccacagaggctatggatgtcacaaacaatctcgcaccagat
acagccgaggaaaatttcccaaagccagatgaggatacaattacactggatgttataaga
agaaatttacatgcaaaaagatacagaagattggatgttttccaagaacatatgtttcat
gtttttgaaacagcaagaaagaataatcgcacagattcggaggtgtatgaagacgcagtt
gaattacaaaaatttttcatcagatatcgagatcagttgtgtaaaaatggtgaaatacta
tcatcacctgctttagcttatacttcaaagatattgcaaaatgaattagatgtcgaaaag
caggaaaaacttcctggtgaagaattagaagatgaagaaggaaagaatgagggaaaagaa
atgagagaaaaggttcaactgtcaactgcttcagatggaatggatgtcaagggtgtaaca
tatcaagctggagattttgtctatgttgaagatacagaagaaacatccagtggaaatcat
ccaccacatattgcttgcatcgaaaaactatatcaagatgaatcaggtcaacaaagaatg
tatggtgtttggttcttcagaccacaagagacttatcatctacagacaagaaaattcctc
atgaaagaggtgttcaagagtgattattataatactgtaccagtaagcagtataaaagga
aaatgtttcgttatgattgggaaagattatttcaaacaaaaaccagtcggttatctggaa
gatgacgtctatgtttgtgtatcgagatattcaagcagaatgaaatcattcaagcgtatt
aaattactaaatctgccacaaaataatactaaaattatcaatagagaaaaagctcttgta
ccagttcgggtgtcatcagtttattcagaaaattcgaaggcaatggaaacaccaaagcta
tctgacatgcatgggccacttgtaacagatgatctgccatggccgactgttgttatacat
aaaaaaagacagaatattaaatttgacaatgcaacccaagaaaataaaccaccagtgtct
cagacattttatcttcaatacaacatcaataatctatgtttgaaagtaggtgacagtgtt
tatgttcaacaacaacacactggttctgatcaaaggttgaagattgccagaatagaatca
atgtggtctgatgcaaataacgtcatgtggttccaaggatcatggtttgctcaaccttgt
gatacatctcatgaacctacaaggatgttcttcaagaatgaagtttttctgctttccttc
aattcaccatatggtgacgaagccacagcatcgatgccaccaccaactccgttgtcatgg
gtagttggagtttgtgctgtcatgtctgtgagagaactctcacaatgccgaccaactgag
atattggaaatgcacattcatgtttgcgaatccagatatctagcagctgataaatttata
aagaaaattaaaggaggttctctgaagaaaccggcatctagtaacaaggtagttgatgat
gaaatgtattacttaaaaaaacctttggaaatatcaaaagaaatttcacccattcttgct
tcgtctgtaaaacaagaactaagagaaagagagattgaattcgctaaagaaaaagaagaa
gaattgagaagaaaaacgatgcaggtccagcaagtccaaggagtacctatgccgcagcag
tatccccagcaaatgatgccccaaccaggacctcagcgacagtaccctgctccacagtac
caagcatacccacaacacccatatcaacaacttcaacaaccttacgttgcccacccacca
caacaacaatacatggccccacctaatcaaccccaggtagtgccaattcaacagccgtac
cagcaacaccaattcccacccgggaccccatatgtagctcatacacaaatgattacacac
catggggtaccttcacccgctccacagcagatgcaaccccagccccaaatgcaacagcaa
tacatgcagccaccgatacagtatactccagctcaaccaggaattccaccgcatatggtg
cagtctccaatgcagccaggtatgcgacaaacaaacacaccaattgatcgcgtcgaaaca
cctagtagttcgacaaccgggactccaacaacgaaaaagaagaatcgtggcggacattcc
actggatatattttattcgcgagtgaatgtcatccccgtatgagggctgaaaatccgaca
atgccgtttggagatattagcaagcttgttggtgaagagtggagaagtcaaactgatgaa
aagaagagagaatatgaagagaaagcaagagaattgagtgcgaaagccgaagctgaaggc
cgaccaatgcaaggaaaaagaagaaaaaaacaacagttgaaaagagaaatggaggaagca
gctgcagcggcccaacagcaacaacagcttcaacaacaacaacatccacctccacaacct
cacatggtggttcaacaacaacaacagatgatgctacagcaaccatacaaccaagcacaa
taccatccaggtcaacaatttcaaccacaacaaggataccaaccatcaacaccacaacaa
ggcactccacagcaataccaaccaggtcaaacgccacaaatggtttcgacacctggccca
gcacctggtcaggtctatgccacaccagtgaatgcaactactgatcagaatggatattct
caacaacctggtagcggtatgagacgtggacctttgtttgtcaaaccaccgcctaaagtt
caacgtgtattgcattcagaagcatacctgagatacattgacagtctggagaaaggaaat
cgaacaatcagtaactttgaaaagaccctttctgttgaagaaaaagatgtcgaaatgtct
gtcaatgatatggctaagttgccagctcattggctggcgaatggtcaaggcagacatgct
agcatcaagtctgcactttggtctctacgtgatctcatgttgaaggatgcactggcgatc
aaaaatcatttcttgtga
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integrated database retrieval system
