Styela clava (leathery sea squirt): 120329007
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Entry
120329007 CDS
T07291
Name
(RefSeq) eukaryotic initiation factor 4A-I-like
KO
K03257
translation initiation factor 4A
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120329007
03012 Translation factors [BR:
sclv03012
]
120329007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120329007
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120329007
mRNA cycle factors
Stress granule specific factors
120329007
Translation factors [BR:
sclv03012
]
Eukaryotic type
Initiation factors
eIF-4
120329007
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120329007
Exosomal proteins of bladder cancer cells
120329007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
CMS1
Flavi_DEAD
AAA_22
UvrD-helicase
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
120329007
NCBI-ProteinID:
XP_039251543
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MSNYEGQKDSGSGEYQGGQKDYGGDSRDYSSKGGGYDTRGGYGQDRGGYSDGGRGGFSDR
RDGGYSDRREGGYSDRREGGYSDRRDGGYSDRRGGGYGQQGGPRDSFEDNRDERREERPP
PQQTANGEPQEQQEAYDGPEGMEPEGIIEGNWDEIVESFDDMDLTEDLLRGIYAYGFEKP
SAIQQRAIKPCIKGHDVIAQAQSGTGKTATFAISILQKIDLNRKKPQALVLAPTRELAQQ
IQKVVMSLGDYQQVNCHACIGGTNMKTSIQQMTTIVPQVVVGTPGRVLDMISRGVLETDD
MTMFVLDEADEMLSRGFKEQIYNIFRCMPGNTQVVLLSATMPADVLEVTKKFMRDPIRIL
VKKEELTLEGIKQFYVLVEREEWKLDTLVDLYATLTITQAVIFLNTRRKVDWLTNKLEEE
DFTVSKLHGDMDQKNREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNREN
YIHRIGRGGRFGRKGVAINFVTNDDKRVLNDIEKFYHTAVEEMPMNVADLI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattacgaaggtcaaaaagattctgggagtggggagtatcaaggtggtcaaaaa
gactacggaggagattctcgggattattctagcaaaggtggtggatacgacactcgtgga
ggttatggccaagatcggggaggctactctgatggaggaagaggtggtttttccgatcga
agagatgggggatattctgatcgaagagaggggggatactctgatcgaagagagggggga
tattctgatcgcagggatggaggatattctgatcgcagaggtggtggatatggccaacaa
ggtggccccagggattcctttgaagataatcgtgatgaaagacgtgaagaaaggccccct
cctcaacaaactgctaatggagagccacaagaacaacaagaggcatatgatggccctgag
ggaatggagccagagggaattattgaaggcaactgggatgagatagttgagtcctttgat
gacatggatcttactgaagatttacttcgtggaatttacgcttatggttttgagaaacct
tctgccattcaacaaagggcaatcaagccttgtattaaaggccacgatgtcatcgctcaa
gcccagtctggaactggtaaaactgcaacattcgcaatatctattctacaaaaaatagat
ttgaacagaaagaagccacaggctctggtactagcaccaacacgagaattggctcaacag
attcaaaaagtcgtcatgtctctcggtgactatcagcaagtgaactgccatgcttgcatt
ggaggtacaaacatgaaaacttcaatccagcagatgacaacaattgttccacaagttgtc
gtgggaactcctggacgtgttttagacatgatcagcagaggagttctcgaaactgatgac
atgacaatgtttgttcttgatgaggctgatgaaatgttgtcaagaggattcaaggaacag
atttacaatattttcaggtgtatgccaggcaacactcaagtcgttttactttctgctaca
atgccagcagatgtgttggaagtcaccaaaaaattcatgagagatcctatcagaattctc
gtgaagaaagaagaactgacacttgagggtatcaagcaattttacgtcctcgttgaaaga
gaggaatggaagttggatactctcgtcgatttatatgctacgctcacgatcacacaagcc
gtcatcttcttgaatactagaagaaaagtagactggttgaccaataagcttgaagaggaa
gatttcactgtgtctaaattacacggtgacatggatcaaaagaacagagaagtgatcatg
aaagaatttcgctctggaagttctcgtgttttaatcacaacagacttgctggctcgtgga
atcgacgtacaacaagtctcccttgtaataaactacgatttaccatccaaccgtgaaaat
tatattcacaggattggacgaggtggccgattcggtcgtaaaggagttgcaatcaatttc
gtcacaaatgacgacaaacgtgttcttaatgatattgaaaaattttatcacacggcagtc
gaagaaatgccgatgaatgttgctgacttgatttag
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