Styela clava (leathery sea squirt): 120329011
Help
Entry
120329011 CDS
T07291
Name
(RefSeq) tumor susceptibility gene 101 protein-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03250
Viral life cycle - HIV-1
sclv03272
Virion - Hepatitis viruses
sclv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120329011
03272 Virion - Hepatitis viruses
120329011
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120329011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120329011
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120329011
Membrane trafficking [BR:
sclv04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
120329011
Exosome [BR:
sclv04147
]
Exosomal proteins
Proteins found in most exosomes
120329011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
CEP89
Vps54_N
MIC19_MIC25
ATG16
CRWN_N
SSNA1
SPC25_N
STB2_C
SAGA-Tad1
RNase_Y_N
DUF7795
CAP12-PCTIR_TIR
CCDC22_CC
Uso1_p115_C
ANG-1
CC_Bre1
CorA
Motif
Other DBs
NCBI-GeneID:
120329011
NCBI-ProteinID:
XP_039251547
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MGDYNQLRQYVHQLMNTNGYTHIPEASSDAANVIRHYPDLKPKDEMFTFNNGSRRKLVHL
VGTIPVRYRGASYNIPVGIYLMNTHPHAAPLCFVKPTPTMQVKPGKHVDMNGRVYLPYLN
EWRPGQHDLTGLVQVMTIVFGEEPPVVSRPTQAPPQRAPYPGVNPPYPQPGPGYPPRGPP
STTYQPANPPYPMGTSHPPYPTNANSAYPPHNATPYPSYPNAMYPPGPAQPPPGQNTPYP
ANPVTNKQSQLSDDMVKASLKSAVNDKLKRRMREAHSQAESEMSSLKQTEKELKDGQVKI
QSIIEKLESETAQVDRNIMILESKNKEIEEKIEAMQNKQDELDVDEVVLPTTPLYKQILE
SFAEEQALEDTIYYLGEGLRKGSVDLDAFLKHVRALSRQQFTLRATIKKARTTAGLAVV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggagactacaatcaacttcgtcaatatgtgcatcagttgatgaacaccaatggatat
actcatattccagaagcttctagtgatgctgccaatgtaataagacattatccagacctt
aaaccaaaagatgaaatgttcacatttaacaatggttcaagaagaaaattagttcatctt
gttggcactattcctgttaggtatcgaggtgcaagttataatatccctgtgggtatatat
ttgatgaacacccatccacatgcagctccactctgttttgtaaaaccaactcccaccatg
caagttaaaccaggaaagcatgttgacatgaacgggagagtatatttaccgtatttgaat
gaatggagaccaggacaacatgatctaactggcttggtacaggtcatgacaattgtgttc
ggagaagaaccacctgttgtctctcggccaactcaagcacctcctcagagagctccatat
cctggtgttaatccgccatacccacaacccggtcctggatatccacctcgtggtccaccc
tctactacgtaccagcctgctaatccaccttatccaatgggaacatcacaccctccctat
ccaaccaacgcaaattcagcttatccacctcacaatgcaaccccatacccttcttaccca
aatgctatgtacccacctggccccgctcaacctccacccggacaaaataccccttatcct
gctaatccagttactaataaacaaagtcaattatcagatgatatggtgaaagcttcacta
aaatctgcagtcaatgataagttgaaaagaagaatgcgtgaagcacattcacaggcagaa
tctgaaatgtcttccttaaaacaaaccgaaaaggaattgaaagatgggcaagtaaaaatt
caaagtattatagagaagcttgagtctgaaacagcacaggtagatcgtaatataatgata
ctggagtcaaaaaataaagagattgaagaaaaaattgaagcgatgcagaacaagcaagat
gaactagatgtagatgaagtcgttttgccaacaactccactctataagcaaatcttggaa
tctttcgcagaagaacaagctctagaagacacaatatattatcttggtgaaggcttgaga
aaaggttctgttgatttggatgctttccttaaacatgtaagagcactttcacggcaacaa
ttcacccttcgggccactattaaaaaagctagaacaactgctggtcttgcggttgtgtga
DBGET
integrated database retrieval system
