Styela clava (leathery sea squirt): 120329023
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Entry
120329023 CDS
T07291
Name
(RefSeq) WD repeat-containing protein 11-like
KO
K24260
WD repeat-containing protein 11
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120329023
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sclv03037
]
120329023
Membrane trafficking [BR:
sclv04131
]
Endosome - Lysosome transport
Others
Others
120329023
Cilium and associated proteins [BR:
sclv03037
]
Other cilia and associated proteins
Other cilium assembly proteins
120329023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
Beta-prop_WDR11_1st
TPR_WDR11
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_RIG_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
TPR_GEMI5
Beta-prop_HPS5
PEP5_VPS11_N
DDE_Tnp_Tn3
Motif
Other DBs
NCBI-GeneID:
120329023
NCBI-ProteinID:
XP_039251564
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MEGRNPAIIPQRIIPGVLSPQNEKAFHWGWHGLIACGSQKTVLIIDPNTLQVVQTLVKHR
YPVNKVKWATENYHHDVASPYSLRVASVDTSGRVVVWDVAQGNERAEFIENGKTLTDLEW
LNCQDASHDLLVAIHSPNMLALWNADTGTKLWRKTYDNVPTLHSITIDPFEPTRFAALGS
DCILFVNDFSISRQPTSDGKKFYMSVDKAQKNVTPTRVNLTAMGRAAISGIRLLIGDEKP
KSNELTLTDCRQLSFLPSMRHHLAAVFPREILILDVSVLQAVASIPLERNGSPFMQVLPV
RQRAALFCAHENGSFSFRLRRFMRLNEESLSEEDGSVTESLSSKVDLNFDTACHSEPFRV
TNRIRPMAAALCPVTERQAAVLVSDGRIFIWKLSSSKKREKPTNSSSIYSPRFFLPAIPR
NHTLSGIIAPTQNILPLNSEKNDLVWGDQISLKFTMVGLFSSLSSQVSCIKMCPPLTHKN
WPHYRPLLAVGLVNGNILVFDLGTGKLTYEFGVHTCEVKGIEWSGLRSIISFAYPTQGNN
STVINEISTTNLQSGRTVPFRTDKVNESPINFIKISSKKQYLMIVFHDKPIELWDIRTLC
ILKELPKSFPTIHAVEWAPAHTVKKKQEDGQAGESEMIHTKEHLVLTDSAATLYHCIAEG
SSFKQGSRIPHISERNSTTTCISWKHDHIFMGDTDGTVSIWNLKTKLSKGIPTHRGWVKK
VRFGPGKGNLNSLVLFEDGLEIWDADDGIAVSAVKTPKQLPKIIDVDWCASDKLVLSCEN
GQILIMDSALTLPPPNLPTAELYYWKSLSCPYLLPTKPALIMKALLQHGKLSVESLGDDF
GYKAVIQNAINALPANMKEFILKNENTLARCTAVARIFGDESEIHLWETFSYYATNKNIE
PDKPMVTDTNLDTLCDCEIFGLNELQRSYRHGLLRNSPGHTKKCIENLVLFGQVDKAINL
SLETEPTSSSYYEDCLKSCLLASLKCNPESSQSSVKLVSTNLIANGRLQEGVELLCMINK
SLDACRYLASHGQWELAVWLAKIRLTGTEYEEIMIRWANHLCSPRVNNKSKAILVYLSLR
KFSRVLETFYQMRYFDRAAMFAQICHELNVLEDDQKLKPLIESIHSEYARFLQQLGCEGE
LVTIHSAQAGETDKNEMNEAASDDTNSSTSSGVMISSPSSNSDDYEKVG
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagaaatcctgctattattcctcagcggattattcctggagtattatcgcct
caaaacgaaaaagcttttcattggggatggcatggactcatagcatgtggaagtcagaaa
actgttctcatcattgacccaaatacattgcaagtagtacagacattggttaaacatcgt
tatcctgttaacaaggtcaagtgggctacggaaaactatcatcatgatgttgcttctccg
tactcactcagagttgcctcagttgataccagtggtcgagtagttgtttgggatgttgca
caagggaatgaacgagctgaatttattgaaaatgggaaaactcttactgatctggaatgg
ttaaattgtcaagatgcttcacatgatttacttgttgcaatacattctccaaatatgctt
gcattatggaatgcagatactggtacaaagttatggagaaagacatatgataatgttccc
actctgcacagcatcaccattgatccatttgagcctacccgatttgctgcccttggttct
gactgcatactatttgtgaatgatttcagtataagcagacaacccacatctgatggcaag
aagttttacatgtctgtcgataaggcacagaaaaatgttacaccaacaagagtgaatcta
actgcaatgggacgtgcagctatttctggtatccgacttctcataggagatgaaaaacca
aaaagcaatgagctcacactcacagactgtcgtcagctttcatttttaccatccatgcga
catcatctagccgctgtttttccacgagaaatattgatcttagatgtcagcgttctacaa
gctgttgcctcaatacctttagaaaggaatggatcccctttcatgcaggtgctacctgtt
cgtcaaagagctgctttgttttgtgctcatgaaaatggttctttttcatttcgactcaga
cggtttatgagattgaatgaagaaagcttatcagaggaagatggcagcgtaacagagtct
ttatcatcaaaagtggatttgaattttgacactgcatgtcatagtgagccatttcgtgta
acaaatcgtattcgacccatggcagctgcgttatgtcctgtgactgaacgacaagccgca
gttttagtcagtgatggtagaatatttatctggaaattgtctagctccaaaaagagagaa
aaaccaacaaacagttcttcaatatattccccaagattttttttgcctgcaattccgagg
aatcatacgttatctggtattatagctccgacacaaaatattttgccactcaattcagaa
aagaatgatcttgtttggggagatcagatcagtttaaaattcacaatggttggattgttt
agttcattatcatcacaagtcagctgcatcaaaatgtgtccaccactcacacataaaaat
tggccacattatcgtcctttactggctgttggactggtcaacggaaacattttggtattt
gaccttggcactggaaaactaacatatgaatttggtgttcatacatgtgaagtaaagggc
atagagtggagtggattaagaagcataatatcatttgcttatccaacacaaggcaataat
tcaactgttattaatgaaatatcaacgactaatcttcaaagtggaaggactgttccattc
cgtactgataaagtcaacgaatctcctataaacttcataaagatctcaagcaaaaaacaa
tatttgatgatcgtttttcatgacaaaccaattgaattgtgggatatcagaactctgtgt
attctgaaagaattgccaaagtcttttccaacaattcatgcagtggaatgggcaccagct
cacactgtgaagaaaaaacaagaagatggacaagcaggagagtcagaaatgattcataca
aaagaacatctcgtgttaactgattcagctgcaacactatatcattgtattgctgaaggt
tcatccttcaagcaaggatccagaattccacatataagtgaaagaaattcgacaaccact
tgtatatcttggaagcatgatcatatttttatgggagacacagatggaacagttagtatt
tggaatctgaagactaaattatcaaaaggaatacctacacacaggggttgggtgaaaaaa
gtaaggtttggaccaggaaaaggaaatttgaattcacttgttttattcgaagatggatta
gaaatctgggatgctgatgatgggatcgcagtcagtgctgtcaagacaccaaaacagttg
cccaaaatcatagacgtggattggtgtgcatcagataaactagttttatcgtgtgaaaat
ggacaaatattaattatggattctgctctgactctaccaccacctaacctaccaacagca
gaactttattactggaaatcattatcatgtccttatcttttaccaacaaagccagcgctg
attatgaaagccttattacaacatggaaagttgagtgttgaatcattgggtgatgacttt
ggatacaaagctgtcatacaaaatgcaataaatgctcttcctgccaatatgaaagagttt
attttgaaaaacgaaaacacactagcaagatgtacagctgtcgccagaatatttggagat
gaatctgagatacatttatgggaaacgttttcatattatgcaacaaacaaaaacattgaa
cctgacaaaccaatggtcactgacacaaatctggacactttatgtgattgtgaaatattt
ggattgaatgaacttcaacgttcatacagacatggacttttgagaaattcgccaggacat
acaaagaaatgtattgagaatcttgttctgtttggccaggttgacaaagcgattaatctt
agtttggagactgaacctacaagcagtagttattatgaggattgtttgaagtcatgtctt
cttgcttcattaaaatgtaatcctgaatcatcacagagtagtgtcaagcttgtttctact
aatctgattgctaacggaaggctacaagagggagttgagcttctatgcatgataaacaaa
tcgcttgatgcttgtcgatatcttgctagtcatggacaatgggaactagctgtatggttg
gcaaagattcgattgactggaactgaatacgaagaaattatgatcagatgggcaaatcat
ttatgttcacccagagtcaacaacaagtcaaaggcaatccttgtatatttatctctgaga
aagttttcgagggttttggaaacattttatcaaatgcgatattttgatagagcggcaatg
tttgcgcaaatatgtcatgaattgaatgtactggaagatgatcagaaactcaaaccccta
attgagtcaattcattctgagtatgcacgattccttcaacagcttggatgtgaaggggag
ttggttacaatacattctgcacaagctggagagactgataaaaatgaaatgaatgaagca
gcaagtgatgacacaaactctagcacttcaagtggagtaatgatatcgtcaccaagtagt
aattcagatgactatgagaaagttggttga
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