Styela clava (leathery sea squirt): 120329046
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Entry
120329046 CDS
T07291
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04145
Phagosome
sclv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120329046
09142 Cell motility
04814 Motor proteins
120329046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120329046
03036 Chromosome and associated proteins [BR:
sclv03036
]
120329046
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sclv04812
]
120329046
04147 Exosome [BR:
sclv04147
]
120329046
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120329046
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120329046
Cytoskeleton proteins [BR:
sclv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120329046
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120329046
Exosomal proteins of other body fluids (saliva and urine)
120329046
Exosomal proteins of colorectal cancer cells
120329046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
120329046
NCBI-ProteinID:
XP_039251591
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcaatccatgttggacaagccggtgtacaaatcggaaatgcctgt
tgggagctttattgcttggaacatggcatccagcctgatggtcaaatgccaagtgacaaa
accatcggaggtggagatgattccttcaacacctttttcagtgaaactggtgcaggaaaa
catgtcccaagagccgtttttgtcgacttagaacctactgtagtcgatgaggtacgaact
ggaacatacagacaacttttccacccagaacaactcatcacaggcaaagaagatgctgct
aacaactatgctagaggacattacacgattggcaaagaaattgttgatcttgtccttgat
cgcattcgcaaacttgcagatcaatgtactggtcttcaaggtttcttgattttccactct
ttcggtggtggaactggatctggtttcgcttccttgcttatggaacgtctttcagttgat
tacggaaagaaatccaagcttgaattcgcaatctaccctgcccctcaggtttcaacagcg
gttgtggaaccatacaactccattctgaccacccacacaacacttgagcattccgactgt
gcttttatggttgacaatgaggccatttatgacatctgccgacgtaatttggatatcgag
cgaccaacctacaccaacttgaatcgtctgatcggacaaattgtgtcatccatcaccgcc
tccctccgattcgatggtgctcttaacgtcgatcttacagagttccagaccaacttggtg
ccatacccacgtattcatttccctctggtaacctacgcaccggttatctcagcggagaaa
gcttaccacgagcagctttcagttgcagaaatcaccaatgcctgcttcgaacctgccaac
cagatggtgaaatgcgatccacgtcacggcaaatacatggcttgctgtatgttgtacaga
ggcgacgttgtccccaaggatgtcaacgctgctattgcaaccatcaagaccaagagaacc
atccaatttgtcgactggtgtccaaccggattcaaagttggaatcaactaccaacctccc
actgttgttccaggcggtgacttggcaaaggtacaacgtgccgtttgcatgttgagcaat
accaccgctatcgccgaagcatgggctcgtcttgaccacaaattcgatctcatgtacgcc
aaacgtgctttcgtccactggtatgttggtgaaggtatggaggaaggagaattctcggaa
gctcgtgaggatcttgctgctcttgagaaagattacgaagaagttggtgtcgactccgtc
gagggagaggccgaggaaggagaagaagagtattaa
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