Styela clava (leathery sea squirt): 120329225 Help Entry 120329225         CDS       T07291                                  Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism sclv  Styela clava (leathery sea squirt) Pathway sclv04142   Lysosome Brite KEGG Orthology (KO) [BR:sclv00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     120329225  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sclv04131]     120329225 Membrane trafficking [BR:sclv04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     120329225  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     120329225    RAVE complex     120329225 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 WD40_MABP1-WDR62_1st Motif Other DBs NCBI-GeneID:  120329225 NCBI-ProteinID:  XP_039251701 LinkDB All DBs Position Unknown AA seq 3227 aa AA seqDB search MRRHQVLTGAVNPGNHCFSVGSIASFTFWAYGSGCDLVILGVDLQPIHIIPGHVKGYKLI TCLDCCQFVGKIAVSYGRDIVIYHPKLLRNENDDVPVFTWIEETTLTLEESVGRATVLSW ASTGERLLVGCNEILLYEIKKESAKEPKSHTLKVQFSIEEIEEEDETEDNVTAEEEAVPQ EVKWELAWSSGIEENPHDVQYAPDDTLFASISRGDSMIKVWHQRNALPMHLFKDASSPGK KHTQDGNIQNTMSSTSHMDLHEQYHTSLPTTTKLDFTFTYLVHPKPVAGFSWRKGVPLLP NGSVPNVLISSCRDNMCRIWCETLTPETDVTKLAAAHATTQPKHQVGKKRHHLHHDKGTS GTVPVKKSVSAPMMSHNNEGMVSDFQIPKQPIKRLFRHFHIAATINPTSDIPLLPSISSM ENGLDGTSDDDDETSELSVFTVHWLDNKHHHAMAHLNEILHETMLENKTEDSQYKLDEVE EDRKSVSSQASISTNPSIRSSRPSSPLKRPSGFTAKFPVWDSTKPESVDAYLSCLASPIS PDVQSDLGLCLPSNVYDLLRRAWLEQSDALFAIHPTDGSLLVWHISYLDENRCGQIRQAQ VSFSSRIPMAIPARDASTLCSRLVLYANHYSSHLSFNDANTSSGILPQANQDNGNGDQLD QDFIASNGNASPSISLLSKHSDGSLNRWEIVFSANASYSTVSSISHRSRFCGHRYHMSGI FCHPTLPLLLTTSRHTTQLKNTESSNEGSKVKSELILWRVDPVGALCQTGGVTELSRLNG PSEDDFSKVAWFPVLFPSWCLGPANTSPSTCFLSLHGSSLHIYQVVIDAQYLLDGLDVPG DPCGLNKEKIGCIASQQSSAHPGCLILLDILPVPGDIITASGEILLLTVFPEDQFSKSHD LEKETDGSQQTPKRGHGISETFYVVLILKTKTAFGSSNIVARTWKISFTAHLSSVSGSRS HRNTATAVSTDSSDDSSDNDSMTDDASDMFFQKLSFLNVSSKELKSQNLKHTPGENISLA TAASDPFSLSVFHRIQELPYSILTTSDNGKVYFWRGMASIFQGLEERENVTWEPWDSNTP ENAEKDASNIIQSQISITGMPLVIKMAHCCLLACLSTDDSDGRNLCFVSIFESVSSGGSI WRLQDKILVGKVDFIASRRVHLDWLSRGDGTFLLTVNIGRKVKIYAQSPIGMQWEDVTVS EAVDNDKPTPSIRPLLKRQSTLDAMTRQKLLGSYKAGKRKSFEKNREGQCSPECDHLLHW SLLSEIALGNSAGLSASNLARPMMSDPQPVMVSWVRDGLLLIATETEMHVFCHWMEQSDT IKPPSGVLYGSASLSQSTPEGLCQYLMQEPDSQGFSELSTNAPVVSLMTVADVLSPCLPQ YHPLVLSELTNGGHLDTVKHILINLTMMINGQLESKNDVIQVEPIKLKKFRLDVDDSTND ESQKYHLAPVLLHDLLDDDGRINERMAYVSTSEKTKGSVAIPSNTKLSQNNKEAENDYGE LFSTSLMDDDDQDGLNLMLDNEPKQESTDLIDLSQFEPGYLGQEHCQVLHNYLSRNLLPG LSSLDQMELMAIADTVANAVHSQVTSEVEGAGGIGVAAGGRGYASSGNTATESMDSCGLR FVFAMHNHLCLLRSLPAPQRAKLLRQGLGSCHFAWAFHSDAEEEILSLISSVQRGAPEWE ELRSFGAGWWIRSTPTLRRLIEQTARAAFQKDSNPLDAAIFYMALNKKNIIKGLFKSTHD DRMTHFFSQDFSEERWHRAALKNAFALMGKQRFQEAAAFFLLANSVQDAVEVCIEKMGDL QLASIIVRLYDQEKSSSAYSEFLQNYVLGGKQEEAATKNKKILPDPFIRSMANWQLGSYD ESLKTLLDNRRRCSDETDLSHVNITDIFNFYNFLRTHPLIMRQKKIDQSQAVSSADQQVD DSITHEERMLFFATAATHLDAGCPLLTLDVLSSLPPLIQEENGHSEDKGTNSQQDVASDL FDTRPVAKANTFASSNDWNVPTIMETSYDAGIKDELELDWSEEEEDNESLSEEDRPKVNI IAPTPIKKEIEEKKMETPKSEPKKSKALYSDMYAHQLRLMACLKIFVSELKSLAMTYHSD GGQIRDQLSSWLEKETEVLHRLSPHSHIKSPTAKLADVQQGHDTDRSQKSDFSSGSESEE EHKMSYSRKTEGDSPAGGTLMPAPSLHELYLAEKQDWKIRREMACHRRRWLRQYRRFLRT LLSYCGLHDDAQGSLSPLRMELLLLLQESLQERTPQQLSSPVPNPTSIPLLSSSVVACRT VVAEPTARLSHMAQDILANLLNFTYPPPYNTWTATQSATVVLCRQAESLSSCIYQSLCDT NSKTYRARLLDNDRTHIPDTLHLPGSVGSGFEQKYVPPGTQPSQWPGVVSLKALLSSESD SRPKLIVLLCESLVAVYISLLVHGLQTCNSLLLYRLVSNSISEKTWNAVFGGGARVIVKY TKPISGQIVRRSHSREHIGSPNRAIDGSKVRDKLNRKVLSYSLERKGSFSESFHSNDATS YREKFVAPETTLWDWFLSKPLITFSGAEDISFESDSDNDDDDNDSISITDDEDEFGELKT EVKVTEHGNPNSYSWHILRLTVVRSVLQNLKSFLPTTGLELSELGISSPMLNSVMQLLGH WQISLAKELESFTNPPDDYMKGIQDVGTSLRGRPAILKHQAMLDPNNTPFSGSSIDALGA RRLWHCLVRKENLQDLFIRYIFKKKVPVETKKHPKHLERRDTVNTNLGSPIHTNQQKADL PSPASTKKLGARRATIAVMSPGADNSNQQFRFGDQKHKLGSTDRGVGKVKILHKETEIIS SFCINNANPNCVVLATNRDVQELDISTLLASDTWSWVEEDISTSLEDVQKPISHKEEDFL MVSRKQSMFVSPTTSQQLLPAPPSSIPWNGSTQTGQGASVLLKRSFSGVRRMSSHPTLPY YLTGHHDGSIRMWEWGHQQQISLFRATGQFPKVTNLHFSSLGNKIAAVDADGYLASWQVS SPKKPFLYHQCHDRNATDCCFMSSTSVLATTGLSHNNRNVAIWDTLLPPRAMLVKDFLVH EGVGATCVNYSAQHRTLVVGARDGKISVFDLRRPDDPLHCFAAHEAHIKCIGLSPDEKLF VTGSVSGDVRVWDINSHLLTYNLSGEHARTSIFRNFGSGTMKVQIAQPGNRVFSCGADGT LKLRILPHDPQEDFALGNSIGSRIQKLTLQRQVVKLANAIRQQCLAY NT seq 9684 nt NT seq  +upstreamnt  +downstreamnt atgcggcgacatcaagttttaactggagctgttaacccaggaaatcactgtttcagtgta ggcagcattgcaagtttcacgttttgggcatatggatcaggatgtgatcttgtaatattg ggagtagatcttcaacccattcacattatacctggtcatgtaaaagggtacaaacttatt acttgtctggattgctgtcaatttgttggaaagattgctgtttcatatggacgagacatt gttatatatcatccaaaacttttgcgaaacgaaaatgacgatgtaccggtctttacatgg attgaagaaacaacattaacattggaagaaagtgtaggacgtgcaactgttttgtcctgg gcatctactggtgaaagacttcttgttggatgcaatgagatactactgtatgagatcaaa aaagaatctgcaaaagaaccaaagagtcacactttaaaagtgcaattttctattgaagaa attgaggaagaagatgagacagaagacaatgttacagcagaagaagaagctgtacctcaa gaagtgaaatgggagttggcttggagcagcggaatagaagaaaatccgcatgatgttcaa tatgcacctgatgatactttgtttgcttctatttctcggggtgactccatgattaaagta tggcatcaacgaaatgccctgccaatgcacctgttcaaagatgcctccagtcctggcaaa aaacacactcaggatgggaatattcaaaatacaatgtcaagcacaagtcatatggatctt catgagcaataccatacttctctacctacaacaactaaattggattttacgtttacttat ttggttcatcctaaacctgttgctggattttcatggagaaaaggagttccattattacca aacggttctgttcccaatgttctaataagctcatgtcgagataacatgtgtagaatttgg tgtgaaaccctaactccagaaactgatgttactaaacttgctgcggctcatgcaacaact caacctaaacatcaagttggaaagaaaagacatcatctgcatcatgataaaggaacatca gggaccgttcctgtcaaaaagtctgtcagtgctccaatgatgagtcacaacaacgaagga atggtgtcagattttcaaattcctaaacaaccaatcaagagattatttcgtcattttcat attgctgcaaccataaacccaacatcagatattccgcttcttccttccatctcatcgatg gaaaatggcttagatggaacaagtgatgacgatgatgagacttcagaactttctgttttt actgttcattggctcgataataaacatcaccatgctatggcacatttaaacgaaatttta catgaaacaatgctggagaataaaacagaggacagtcaatataaattagatgaagttgag gaagatcgcaaatctgtcagcagccaagcaagtatctcaacaaatccttcgattagaagt tcaagaccatcatctccattgaagagaccttccggcttcactgcaaagtttccagtatgg gatagcactaaaccagaatccgtggatgcgtacttatcatgtttagcttcaccaatttca cccgacgtgcagtctgatcttggactttgcctaccttctaatgtttatgatttgctgaga agagcctggttagaacagagtgatgcattatttgctattcatcctaccgatggttcgcta cttgtctggcatatcagttacctggatgaaaacagatgtggacagatccgtcaggctcag gtttcattttcatctcgaataccaatggcgataccagcccgggatgcatcaactctttgt tcgagattggtcttatatgctaatcattattcttctcatctctcttttaatgatgccaac acatcatctggaatattgccccaagcaaatcaagataatggcaatggtgatcaacttgac caggactttattgcttccaatggaaatgcaagtccatcaataagtttgctgagcaaacat tcggatggaagtttaaatcggtgggaaattgtgttttctgctaatgcaagctattcaaca gtatcgagcattagtcacagatcaagattttgtggtcatcgttaccatatgtctggtatc ttctgccatcccactctaccattactactgacaacatccagacacaccactcaattgaaa aatactgaatctagtaacgaggggtcaaaggtcaagagtgaactgatattatggagagtc gatcctgtgggtgccctatgtcaaactgggggtgttacagagttatctagattaaatgga ccatcagaagatgacttcagcaaggttgcctggttccctgttcttttccctagctggtgc cttggacctgcaaatacctcgccaagtacctgttttctatctctacatggatcatctctt catatctaccaagttgttatagatgcacaatatctactagatggtctggatgtacctggt gatccttgtggattgaacaaagaaaaaattggttgcattgcttcacaacaatcatctgca catcctggctgtcttatcttacttgatattctaccggtacctggtgatataatcactgcg tctggtgaaattctgctcctcactgtctttcccgaagaccagttttcaaagtcacatgat ttggaaaaagaaactgatggctcacaacagacaccgaagagagggcatggaatttctgaa acgttttatgttgttctgatcttgaagacaaaaactgcttttggatcatcaaatatcgtt gctaggacttggaaaatttcttttacagctcatttgagttcagtatcaggatctcgttct catcgcaatacagctacagcagtgtctaccgattcatctgatgattcatcagataatgat agtatgacagatgatgcctcagacatgttttttcagaaattatcatttttaaatgtttca tcgaaagaactgaaatctcagaatctcaagcatacacctggagaaaatatatcactcgct actgctgcttcagatccattttctctctccgtatttcatcgcattcaagaattgccgtat tcaattttaactacaagcgataatggaaaagtctatttctggcgaggcatggcttcaatt tttcagggtctagaggaaagggaaaacgtaacatgggaaccatgggattctaatactcca gaaaatgctgaaaaagatgcgtctaatatcatccagtcacagatttctattaccggaatg ccgcttgtgattaagatggctcattgttgtttattagcttgtctttctactgatgatagc gatggacgaaacctgtgttttgtttcaatttttgagtctgtatcaagtggtgggtccata tggcgtcttcaagataaaattttagttggaaaagttgattttattgcttcacgacgtgtt catttagactggctttctcgtggtgacggtacatttttgctgacagttaatatcggacgg aaagtgaaaatttatgctcagtcaccaataggtatgcagtgggaagatgtcacagtttca gaggccgttgataacgataaacctacgccatcgattcgacctttactgaaaagacaaagc acgcttgatgcaatgacgcgccaaaaattacttggatcatacaaagctggaaaaagaaaa agtttcgaaaaaaatcgggaggggcaatgttcgcctgaatgtgaccacttgctccattgg tcacttctttctgaaatcgctcttggcaactcagcaggtctctctgcgtcaaatctcgct cgaccaatgatgtccgatcctcaaccagttatggtttcatgggttagagatggtctgttg ctaatagcaactgaaacagaaatgcatgttttctgccactggatggagcaaagtgacacg atcaagccaccttctggagttctctacggaagtgcttcactgagtcagtcaacacctgaa ggattatgtcaatatttaatgcaagaacctgattcgcaaggtttctctgaattatctacc aatgctccagtggtcagtctgatgaccgttgcagatgttttgagtccttgtctgcctcaa tatcatcctcttgttttgtctgaactgaccaatggtggacatttggacactgtcaaacac attttaatcaacctaaccatgatgatcaatggacaactggaatcaaaaaatgatgtcatc caagtagaaccaattaaattgaaaaaatttcgacttgatgtggatgattcaactaatgat gagtcacaaaaatatcatcttgctcctgttctacttcacgatttattagatgatgacggc agaattaatgagagaatggcatacgtatctacatcagaaaaaacaaaaggttctgttgca attccatcaaatactaaattgagccaaaacaacaaagaagctgaaaatgattatggtgaa ttgttctctacttctctaatggatgatgatgatcaggatggattgaatctgatgctggat aatgaaccaaaacaagaatcaactgatctgattgatttgtctcaatttgaacctggatat ctgggacaagaacattgtcaagttctacataactacttgtcaagaaatttgctacctggt ttgagtagtcttgatcagatggaattaatggcaattgctgatactgttgctaatgcagtt cattcacaagttacatctgaagtggaaggagctggaggtataggagttgcagctggtgga cgaggttatgcttcctctggcaatactgctactgaatctatggattcttgtggattgaga tttgtatttgcaatgcataatcatctatgtttactgagatcattgcctgcgccacaacga gctaaattacttagacaaggactcggatcatgtcattttgcatgggcttttcactctgat gctgaagaagaaatcctctcactcatttcgagtgtacaacgaggagcacctgagtgggaa gaacttcgatcatttggtgcaggatggtggatacgaagtactcctacattgcggagactc attgaacaaactgccagagctgccttccagaaagatagcaatcccctcgatgcagcaata ttttatatggcactaaataagaagaatattatcaaaggactcttcaagtccacacatgat gacaggatgacacattttttttctcaagatttttcagaagaacgttggcatagagctgca ttgaagaatgcttttgcattgatgggaaaacagagattccaagaagcagctgctttcttt ttacttgccaattcagttcaagatgcggtggaggtttgtattgaaaagatgggggattta cagctcgcttcaattattgtacgtttatatgatcaagaaaaatcatcatctgcctattct gaatttcttcaaaattacgtcctcggaggcaaacaagaggaagcagcaacaaaaaataaa aagattctaccggatcctttcatccgaagcatggcaaattggcaactaggatcttacgac gaatcattgaaaacgttgctcgataatcgtcgacgttgctcggatgaaacagatttatct catgtcaacatcacggatattttcaatttttataatttcttaagaactcatcctcttatt atgagacaaaagaagattgatcaatctcaagcagtatccagtgcggaccaacaagtagac gacagtataacacatgaagaaaggatgcttttctttgctactgcagcaactcatctagat gcaggatgtccgttacttactctagatgttctatcttctctacctcctctcatacaagag gagaatggacatagtgaagacaaaggtactaactctcagcaagatgtagcatctgactta ttcgacactcgacctgttgctaaggctaacacttttgcttcgtcaaacgactggaatgtg ccaactattatggagacaagttatgatgcgggaataaaagatgaacttgaactcgactgg agtgaggaagaggaggataatgagagtttgagtgaggaagatagacctaaagtcaacata atcgctcctacaccaatcaaaaaagaaattgaagagaaaaaaatggaaactccaaaaagt gaacctaagaaaagcaaagccttgtattcagatatgtatgctcaccagttgagactcatg gcatgtttgaaaattttcgtatcagagttgaagtcattggcgatgacatatcattctgat ggaggacaaatcagagatcagctcagttcatggcttgaaaaagaaaccgaagtactccat agattgtcacctcattctcatataaaatctccgacagcaaaactagcagatgttcaacaa ggtcatgataccgaccgaagtcaaaaaagcgacttctcaagtggatcagaatctgaagag gaacacaaaatgagttactccagaaaaacagaaggagattctccagcaggaggaactctg atgcctgcaccgtccttacacgagttatatcttgcagaaaaacaggattggaagatccga cgtgaaatggcatgtcatcgtagaagatggttgagacagtatagaagatttttacgaacg ttgttgtcatattgtggattgcatgatgatgcccaaggatcattgtctcctctgagaatg gaattactattgttattacaggaatcactacaagaacgaacaccccaacagctttcgtca cccgttcccaaccccacgtccataccccttctatcatccagtgttgtggcatgtcgtacc gttgttgccgaacccacagccagattgtcacatatggcacaagatattttagccaactta ctcaatttcacatatccaccaccttataacacatggacagcaacccagtcagctacggtt gtcttatgcagacaagcagaatctctgtcttcatgtatttatcaaagtctttgtgatact aattcaaagacatacagggcccgtttacttgataatgacagaacgcacatcccagatacc ctgcatctacctggatctgtgggcagtggattcgaacaaaaatatgtaccacctggtact caaccatcacaatggccaggtgttgtatctctgaaggcattgttaagttcggaatcagac agccgtccaaaattaattgtactcttatgtgaatctttggtggctgtgtatatcagttta ttggttcatggattgcagacttgtaactcgttgttattgtacagacttgtgagcaattca atctctgaaaaaacatggaatgcagtatttggtggaggtgcaagagttattgtgaaatat acaaaaccaatatcaggacagattgtccgacgttctcatagtcgtgaacatatcggatca ccaaatcgtgctattgatggcagcaaagtgcgagataaattaaatagaaaagttttatct tattctttggaaagaaaaggaagtttctctgagagttttcatagcaatgatgcaacttct tacagggagaaatttgttgctcctgaaaccacattatgggattggtttctttctaaacca ctgataacgttctctggtgctgaagatataagctttgaatctgacagtgataatgatgat gatgataatgatagtatcagtataactgatgatgaagatgaatttggtgaattgaaaaca gaagtcaaagtaactgaacatggaaatccaaattcttatagttggcatattctcagattg accgtagtaagatctgttttacaaaacttgaaatcatttttaccaacaactggattagaa ctttcagaacttggaatttcatctcctatgttaaacagtgttatgcaattacttggacac tggcaaatttctcttgctaaagaattagaatctttcacaaatcctccagatgattatatg aaaggaattcaagatgtcggtacatcattacgtggaagaccagcaattcttaaacaccag gctatgttggacccaaataatactccattcagtggttcatccattgatgctctgggtgca agacgtctgtggcattgcttggttcgcaaagaaaatttacaagatcttttcatccgttat attttcaagaaaaaagtacctgtggagacaaagaaacatccaaaacatttggaacgaaga gacacagtaaatacaaatcttggttcaccaattcataccaatcaacaaaaggctgatcta ccgtcacctgcgtccactaaaaaattaggggctcgtcgagccactattgctgttatgtct cctggtgctgataacagcaatcaacaatttcgttttggagatcaaaaacacaaactgggc tcgacagacagaggtgtcggtaaagtcaagatattacacaaggaaacagaaattataagc tcgttctgcatcaataatgctaatccaaattgtgttgttctggcaacgaatcgcgatgtt caagagctggatatatcaacattacttgcttctgatacatggtcatgggtggaagaagat atatcaactagtctagaggatgtacagaaaccaatttcccataaagaagaagattttcta atggtttcaagaaaacaatcaatgtttgttagtccaacgacatcacaacagttgttacct gctccaccttcctcaataccatggaatggttccacgcaaactggacaaggagcttctgtt ctgttaaaaagatcattttctggagtacggagaatgtcatcacatcctacattaccatac tatttaactggccatcatgatggaagcataagaatgtgggaatggggtcatcaacaacaa atatctttatttagagctacaggacagtttccaaaagttactaatctacatttttcatcg ttgggaaacaagatagcagcagtagatgcagatggatatctagcatcttggcaagttagt tcacctaagaaaccgtttttgtatcatcaatgtcatgatagaaatgccacagattgttgt ttcatgtcatcaacaagtgtattagcaacaacaggtttatcacataataataggaatgtt gctatttgggatactttactgccacctagagcaatgctggtgaaagatttcctggttcat gagggcgtgggtgcaacatgtgtcaattactctgctcaacatcgcactctagtggttggt gctagggatgggaaaatttctgtttttgacttgcgtcgtcctgatgatcctttacattgt ttcgctgctcatgaagctcatatcaaatgcattggattgagtccggatgaaaaacttttt gttactggatcagtatctggagacgtaagggtttgggacatcaactctcacttattgact tacaatctaagtggagaacatgccaggacatcaattttccgcaactttggttctggaacc atgaaggtacaaatcgcgcaaccaggaaacagagtgttctcttgcggagctgacggaact ctcaaacttcgaatcttacctcatgatccgcaagaagattttgcactgggaaattcaatc ggaagtcgaattcaaaaattaacccttcaacgacaagttgttaaactcgctaatgcgatt agacagcaatgtcttgcttattaa

DBGET integrated database retrieval system