Styela clava (leathery sea squirt): 120329323
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Entry
120329323 CDS
T07291
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
KO
K24756
WD repeat-containing protein 86
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
120329323
Domain-containing proteins not elsewhere classified [BR:
sclv04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120329323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_EML
WDR90_beta-prop_4th
WD40_like
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
120329323
NCBI-ProteinID:
XP_039251855
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MGQEVQSKKSKPGSNRGSDKRKQLLKTLGGHTGGINCMDISASGSYLLTGSDDRTARIWD
LVTYENKVVLEGHSGYISCCKIWKDRFALTGSVDKTIRKWNVFSGNCVLKMEMHRGIVNT
LLPFGIYLLSASYDRTVICWNVDTGQAARVLRGHKQSILPMLYVKTAEHNPMGAEDIDRN
KDALITGSMDCTAKIWSIHSGTSLRTFRGHKGAILCLSMDRDKKYLYTGSTDFSIKKWNL
ASGTLLKSFKGHEGSVICLEMNQKLLYSASVDSTARCWVAEFGDTTRKYSGHEHMISDMK
YHKGLLITSSGDNTVRVFDAKSGSLKRTFKGHKYAVNCIMAVDSMIFSASYDGTIRIWNI
RDLIREKLSVDESCSSLASSEPSVIEGRATGSDVSIRNGRTVYNTKQTREDHDNESIPMS
TFKIEKEESRHRTENGNFSRQKRKGTKTSNKIAPMGTRNNNNNNGIQCPSTDNLLDENDL
VGNIMDNSAIETANEQISHSNSTASYHDAKEVWEESVSVKSGSNRIESSNKGRSPKILSQ
LSRSSTKASLFSTPDNATRNSSYIKESDIQLHSASTFRTNSISISLPSSSDSSRAPTSKN
AHDRESSDVSRKRVKTEESESPKNVSVNEKTPSRMSSADLALVDEEMRMIAVETDSTSTG
YHSDKSSPQSPNQIDKKQQLPLTGKRSVLKSRLKSSIPSPVQERSAPKRSNAGKPSLWAP
CSNSTESNNNTKSRKFPRSVGSRRSNNSIRSSKTPLTPKERERLENEILEMS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaggttcaaagcaaaaagagtaaaccagggtcgaatagaggaagcgataag
cgtaaacaactactaaagaccctaggaggtcacactgggggtatcaactgtatggatata
tcagcaagtggtagttatcttctcaccggatccgacgacagaactgcgagaatttgggat
ttagtaacctacgaaaacaaggttgttctagaggggcattccggatatattagctgctgc
aaaatatggaaagacagatttgcgctaactggaagcgtggataaaacaatccgaaagtgg
aatgtgttttctggtaactgcgttttaaagatggaaatgcacaggggaatagtcaacaca
ttgctaccatttggtatctatctcctcagtgcgtcatacgatcgcaccgttatatgctgg
aacgttgacactgggcaagcggctcgtgttttacgcggacacaaacaaagcatcctacca
atgctatacgtaaaaactgcagagcacaaccccatgggtgccgaagacatcgatcgaaac
aaggatgctctcattactggttcaatggattgtactgccaagatttggagtattcattca
ggtactagtcttcgaactttccgtggtcacaaaggagcaatactttgtttatctatggac
agagacaaaaaatatctctacacagggtcaacagatttttcaattaaaaagtggaattta
gcgagtgggacattactaaaaagcttcaaaggtcacgaaggatcggttatatgtctagaa
atgaatcaaaaattgttatatagcgcaagtgtagacagcaccgctagatgctgggtagca
gaatttggagacacgacacgaaaatattctggacatgaacatatgatctcggacatgaaa
tatcacaaaggattattgatcacaagctctggcgacaatacagttcgagtttttgacgcg
aaatcaggatctctgaaaagaacatttaaaggccataaatatgcagtgaattgcatcatg
gctgtcgacagcatgatttttagcgcctcctacgacggtacaatacgaatatggaatatc
cgagatttaattcgagaaaaactgtctgtcgatgaatcttgttcttcactggcttcctct
gagccttcagtgatagaggggagagcaactgggagtgacgtatctataagaaatggtcga
acagtgtataacacaaaacaaacaagggaagaccacgataatgaatcaatacccatgtca
actttcaaaatagaaaaagaagaatcacgtcatcgtactgaaaatggtaattttagtaga
caaaaaagaaaaggaaccaaaacctcgaataaaattgcaccaatgggaacgcgaaacaat
aacaacaataatggtatccaatgcccatcaactgataacttattagatgagaatgatctt
gtcgggaacataatggataattctgccattgagactgcaaatgaacaaattagccatagt
aactctacagcgtcatatcatgatgcaaaggaagtttgggaagaatctgtttctgttaag
tcgggctcaaacagaattgaatcaagtaataaaggaagatcacccaaaatattgtctcaa
ttatctagaagttcaacaaaagcatcgctattttcaacacctgataacgctacaaggaac
agttcatatattaaggaaagcgatattcaattacattctgcatctacgttccgaacaaac
agcatctccatttccttaccatcgtcgagcgattcctcgagagcgccaacctcaaagaat
gcacatgatagagaatcttctgatgtcagtaggaagcgagtaaaaacggaggagtcagaa
tcaccgaaaaacgtgagcgtgaatgaaaagacaccatctcgaatgtcatctgctgattta
gcgctagtcgacgaagaaatgagaatgattgctgtagaaactgactccacgtcaacgggt
taccacagcgataaaagctcgccacaatcaccaaatcaaatcgataaaaagcagcagtta
cctttaactggtaaacggagtgtcctgaaaagtcgattaaaatctagtattccaagccct
gtgcaagaaaggtccgcacccaagcgttcgaatgctggcaaaccctccttatgggctccg
tgctctaatagcacagagagcaataataacaccaaatcgagaaaatttccgagaagtgtc
gggtcacgacgatctaacaatagtattaggtcttctaaaactccactcactccaaaagaa
agagaacgtctggaaaatgaaatattggaaatgtcatga
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