Styela clava (leathery sea squirt): 120329325
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Entry
120329325 CDS
T07291
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04080
Neuroactive ligand-receptor interaction
sclv04082
Neuroactive ligand signaling
sclv04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120329325
04082 Neuroactive ligand signaling
120329325
04519 Cadherin signaling
120329325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sclv04040
]
120329325
Ion channels [BR:
sclv04040
]
Ligand-gated channels
GABA-A
120329325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120329325
NCBI-ProteinID:
XP_039251857
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MQNAIRKIHWIIFLCILFENAYAGSRSVLQAQIKKRLDRMLGKGYDIRLRPDYGAEPLAV
GMAIEIASIDAVSEVNMDYTLTLYFQQRWRDSRLAYRDLDANLTLDSRVVENIWVPDTYF
VNDKKSFMHDITRKNIMLRMQPNGLITYGLRITTELACMMNLKRYPLDEQNCTLEIESYG
YTTQDIKFYMIDGSSVTGVENLKLAQFDVTGSQLLIRDITFATGSYPRVSLSFKLKRNIG
FFILQTYMPCALITILSWVSFWINFEATAARVSLGITTVLTITTISTNVRASLPKLPDIK
ALDVYLIICFLFVFMALLEYAFVNYTYYGGKARSAKRKLQTKIRDELQIQGSQLELVHNQ
RVSKESESHETTALVDNYYFDYVARNRLVGCNVSHLVSEDDIRTNQHSELVDISDGTSPR
TSVYGDGRTQMQSNNSVMRDRKISSTQQSRRSSYWKGRNDRGRKTALRQRKTKESNLRST
MVKRAKKRVNSIKMPVVDDVNIIDKVSRVAFPTSFAVFNLVYWTFYTFF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgcaattcgaaagattcactggatcatttttctctgcattctctttgaaaat
gcctacgcaggatcaagatcggttcttcaagcgcagattaaaaaaagactcgatagaatg
ttggggaaaggatatgacatcagattgagaccagactacggggctgaaccactggctgtg
ggtatggcgatagaaattgcgagcatcgatgcagtgtcagaagtaaacatggactatacg
ttgacgctttacttccagcagagatggcgagatagtagattagcctatcgtgatcttgat
gcaaatctcactcttgatagcagggttgttgaaaatatatgggtgccagacacatatttt
gtgaatgacaaaaaatcattcatgcacgatatcacaagaaaaaacataatgctgagaatg
caaccgaatggtttaattacttatggcttgagaataacaacggaactggcatgcatgatg
aatttgaagagatatccgttggatgaacaaaattgtacattggaaattgaaagttatggg
tatacgacacaggatatcaaattttacatgattgacggcagttcagtaacgggagtcgaa
aatttgaaacttgctcaatttgacgttactggttcacaattattaattagagacataacg
tttgcaacaggttcatatcctcgagtgtccctcagttttaaattgaaaagaaacattgga
ttttttattcttcaaacttatatgccttgtgcattgataacaattctaagctgggtttca
ttctggattaattttgaagcaacagcggcaagagtatctctaggaatcacgactgttctc
acgataacgaccatcagcacaaatgttcgagcatctcttccgaagttaccagacatcaaa
gcattggatgtttatcttatcatatgttttttatttgtattcatggcgttgcttgagtac
gcatttgtaaactatacatactatggtggaaaagctagaagcgctaaaaggaaactgcaa
acgaaaatccgagatgaattacagattcaagggtcccaactagaattggttcataaccaa
agagtttctaaagaatcagaatcacatgaaaccactgccctcgtcgacaactattacttt
gattacgtagcacggaatcgtttggtaggatgcaatgtatcgcatctagtgagtgaggat
gatatacgaacaaaccaacacagtgaacttgtagacataagcgacgggacaagccccagg
accagtgtttacggtgacggacgtactcagatgcaatcaaataattccgtaatgagggat
agaaagatttcttcgacccaacaatcaagaagatccagttactggaagggaagaaacgat
agaggacggaaaacggctttgaggcaacgaaaaacgaaggaaagtaatttacgatcgaca
atggtgaaaagagcaaagaaaagagtgaactcgataaaaatgccagttgtggacgatgtt
aatattattgataaggtttcacgagtggcatttcccacgtcgtttgcagttttcaacttg
gtgtattggacgttttatacgtttttctaa
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