Styela clava (leathery sea squirt): 120329327
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Entry
120329327 CDS
T07291
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04080
Neuroactive ligand-receptor interaction
sclv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120329327
04082 Neuroactive ligand signaling
120329327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sclv04040
]
120329327
Ion channels [BR:
sclv04040
]
Ligand-gated channels
GABA-A
120329327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2322
Motif
Other DBs
NCBI-GeneID:
120329327
NCBI-ProteinID:
XP_039251861
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MTMRILMKAIIFVLNCSFILSILDTQAMAEGTSNKPCGDSSTCPEDISKLLDSFLEDYDS
RIRPGFEDGPTKVYTYFHVTGFGPVSETDMEYTLDMFFRQRWRDERVAFKHANISELKLN
NMMAQKLWTPDTFFRNGKKSIAHNITVPNRLLRIDPEGNILYTMRLTIKARCPMQLIDFP
MDVHTCVLLFGSYGFTSDQVQFYWYEENSTTPVDVPETSSRLNQFSLLGHSWDSHTIRTT
TGDFSVLQTKFHLRREMGYFVVQTYLPCILIVILSQVSFWINKEAVPARTVSGIMTVLNL
TTLSISTRQSFPKVSYATALDWYISVCFAFCFAALIEFASVNYFERRNKERRKRLPAFDR
DRIQPEIFQTSPLRKRYIPLKRGTGTTDVSVVDLYKIIAGQPVNENQSFMYYIHSIGSYF
VPDYFQNSGHLKNTAGKGRYDVDAAQKLLEAISPHIREAANAEGNVSNIDRISRVAFPLA
FFVFNIVYWYVYLSHRSHEVSQRSSGAQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaggattcttatgaaagcgataatttttgttcttaactgcagctttatttta
tcaatactggacacacaggccatggctgaaggcaccagcaataaaccttgtggagacagc
agtacttgtccagaagacatttctaaattactggacagtttcttggaggattacgacagc
cgaataagaccgggattcgaagatggtccaacaaaagtatacacctattttcatgttact
ggatttggacctgtttccgaaacggacatggaatatacgcttgatatgtttttcagacaa
agatggagggacgaaagagttgctttcaagcatgcaaacattagcgaactgaaacttaac
aatatgatggctcaaaaattatggaccccggatacattctttcgaaatgggaagaaatcc
attgctcacaatataactgttcctaatcgtcttcttcgtattgacccagaaggcaatatc
ctatacacaatgagattgacaataaaagcaaggtgtccgatgcaattgattgactttccg
atggacgttcatacgtgtgttctactctttggaagttatggatttacttcggaccaagta
cagttttattggtatgaagaaaatagcacgacaccagtagatgttcctgaaacatcttcg
cggctaaatcaattttcgttgctaggacattcttgggactcacatactattagaaccact
acaggtgacttctctgtacttcagacaaaatttcacctacgtagagaaatgggatatttt
gttgttcagacttatctaccgtgcatcctgattgtgattctatcgcaggtatctttttgg
atcaataaggaagctgtaccagctcgaactgtatctggaattatgacagttctcaattta
actactctgagtatcagtacaagacaatcattccccaaagtatcgtatgcaacagcgttg
gattggtatatctccgtttgctttgcgttttgttttgccgccttgattgagtttgcttca
gtgaattacttcgaaagaagaaacaaagaacgaagaaaaagattgcctgcgtttgataga
gacagaatacaacctgaaatattccagacttcaccgttgagaaaaagatacattcccttg
aaacgtggtacgggaacgaccgatgtcagcgtagttgatttgtacaaaataatagccgga
caaccagtcaatgagaatcaaagttttatgtattatattcactccattgggtcatacttt
gtaccagactactttcaaaattctggccacttgaaaaatactgcaggtaaaggaaggtac
gacgtagacgcagcgcagaaacttttagaggcaatcagtccccatatacgagaagcggca
aatgcagaaggaaatgtaagcaatatcgaccgaatatcacgagttgcgtttccacttgct
ttctttgtcttcaacatcgtgtattggtacgtttacctttcccatcgatctcacgaggtg
tcgcaaagaagtagtggagctcaataa
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