Styela clava (leathery sea squirt): 120329339
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Entry
120329339 CDS
T07291
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120329339
Membrane trafficking [BR:
sclv04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120329339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
TRAPPC13_C
N_BRCA1_IG
Spec3
Ig_TRAPPC9-Trs120_4th
Motif
Other DBs
NCBI-GeneID:
120329339
NCBI-ProteinID:
XP_039251873
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MAESLKSTHDFIKSAFSIRVGVLSSQDAEFVSQKNNLSFSELIQPFCTLTNEAKIQGIGA
QVYRAYNVHVRVSDIRQKYASIDKNIIRQMIADLVSKSGSSDNIQTISVPCKEYDLSVNR
SCPWMDTYRDMMVKFGPPQDHEFLNHHIACMLVVSSLHPNPMQEFANLSQLQNHIQHGEK
NNDSLRWMTPNTLKYFVLLHDAQQSDDSKAKEVFATLQATYGTKVCHFLCINSRNVSNSE
GAQNLPDPWHQFMNSSTSSLKNNVTDVAYSKISTVNGTNSEENQPWFNDIIKNSKTSVEK
GFGCCLTMADHDGLQSFMHDFIVSALIPHMEKTIKNINDQLSARKALHKSLFRATRTLFG
SSKSPSSVASTSGYSHDANELLLRKIADLCFLSQMYDQAFYFYHNAKKDYTNDQAWLYAA
GASEMAATSNFMQRNTQKTYPSHYMESAITMYIDVCKNDYLALRCSLIHAECLQFLGQFN
EAAFYLIKVTNETDDLRSALLLEQAAHSYLKMKEPQPKKFAFHLILAGHRFSKCAQRAHA
LRSYNLALQVYLGQGWSLAEDHINFAMARQSFNMKHLLDSSKSFRSLLVQESSQPSSQQA
AFFHEFIHIFQQCEQLNDAKVENAMLGLPKLLESETKVCLDQSDNDFTPEFNTKMSKLVN
LLLDSEPLLPGTVVSGMKCFCKSTSNVKSPQLAVGEVVNIEVTFQNYLDVPICMSDITIK
WDFKLPEKENSQLIEGDIFQCSSVPILTIPPLTKKTALFTAKPLKPGVLTALGTSYKLGL
SSSDSSEDTEHDTSYSVKDYQPFNILGRRLNKTKDERCGVMYGTDQRLNFHVLPVLPKMS
ATFDNFPTTMVCNEVVNTTIRLQNTGNVQLDIVKILANDKVQFTICGTNGHKFILPNVVT
TDSKSKKIKFTNVLSEPLLPGKSVKMDVCIKAPATSGIHQADALVYCKSNCIVDGPSGRT
FFIRNHIECTEGVDILAELMTPVNQENFIISLRVRNASTKDSWMLFIEDVTCSNSSCVVE
IVGDKKLPALSVNNHLYMYLNLAKKFDVDSEKRDLYEPPEIIIHWKGGYNDAFMYGQHQL
DLKDLFEGLGTFSTPETMPVKISDNMPKSAEEFSLQTLHRLVTWRLRYNSTIKHDFTANN
LCHTDMTLMVYNLSNLKLHVTVSLPNVEDNFGKRQSHTDFAWVGATEAKRLLAPHSEIKV
NLKACFARRGVFNVSGVSVTAIPMHLMGTTPQIPQKPPCGYFINIE
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagcttgaaaagtactcatgattttattaaaagtgcattttcaattcgagtt
ggtgtcctttccagccaagatgctgaatttgtcagccagaagaataatctgtcattttct
gaactgattcaaccattctgtacgttaacaaatgaagcgaaaattcaaggaattggtgct
caagtataccgagcttataatgtccatgtacgcgtgtcagacattcgacaaaaatatgcg
agtatcgataaaaatattatacgtcaaatgatagcggatttggtttcaaaatcaggttcc
agtgataatatacaaaccatatctgttccatgtaaggaatatgacttgtctgtgaatcgt
tcatgtccgtggatggatacttacagagatatgatggttaaattcggacctccgcaagat
catgagtttttgaatcatcatattgcttgtatgttagtcgtatcatcacttcatccaaac
ccaatgcaagaatttgcgaatctgagccaacttcaaaatcatatccaacatggtgaaaaa
aataacgattctttgagatggatgacgccaaatacattaaaatattttgttcttcttcat
gatgcgcaacaaagcgatgatagtaaagcgaaggaagtttttgcaacattgcaagcaaca
tatggaacaaaagtttgtcattttttatgtataaactccaggaatgtatcgaactccgag
ggtgcgcaaaatttgcctgatccatggcatcagtttatgaattcttcaacgtcttctctg
aaaaataatgtaactgatgttgcttattctaaaatatccacagtgaacggaaccaattct
gaagaaaatcaaccatggttcaatgatatcataaaaaattcgaaaacgtctgtcgaaaaa
gggtttggatgttgtcttactatggctgatcatgatggtctgcaatccttcatgcatgat
tttatagtttctgcacttatacctcatatggaaaaaacaataaaaaatatcaacgaccag
ctgtcagcaagaaaagcgttacataaatcattgtttcgtgcgacaagaactttatttgga
tctagtaaatcaccatctagtgttgcttccacatcaggttatagtcatgatgcgaatgaa
ttgcttttaagaaagatcgcagatttgtgttttctgtcacagatgtacgaccaagctttt
tacttttatcataatgcaaagaaggattacacgaacgaccaagcttggttgtacgctgct
ggtgcatctgagatggctgccacatccaatttcatgcaacgcaacactcagaaaacttat
ccttctcactacatggaatcagcgataacgatgtacattgatgtatgtaaaaatgactac
cttgcccttagatgctcactgatacatgctgaatgtttacagtttctaggacagttcaat
gaagcagcattttatttgataaaagtcacaaatgaaacagatgatctgaggagtgcatta
cttttggagcaagctgcacattcttatctcaaaatgaaagaaccgcagcctaaaaagttt
gcatttcacttgatcttagcaggtcaccgatttagcaaatgtgcccaaagagcacatgca
ctgcgtagctataaccttgccctccaagtatatctgggccaaggatggagtctagctgaa
gatcatattaattttgccatggcaagacagtcttttaacatgaaacatttattggattca
tcgaagtcatttcgcagtcttcttgttcaggaatcttctcaaccttcatcccagcaagct
gcattttttcatgaatttattcatatatttcaacaatgtgaacagttaaatgatgcgaaa
gtggaaaatgcaatgttaggtttaccaaaattacttgaatcggaaacgaaagtttgtctc
gatcagagcgataatgactttacaccagaatttaataccaagatgtctaaattggtaaat
ttacttttggattcggaacctttactgcctggtactgttgtcagcggaatgaaatgcttc
tgtaaatcaacttctaatgttaaaagtccacagttggctgtgggggaagttgttaatatc
gaagtgacatttcaaaactacctggatgttccgatttgcatgtcggatattacaataaaa
tgggatttcaagctgcctgaaaaagaaaattcacagcttattgaaggtgacatatttcaa
tgtagttctgtgcctattctgaccattcctccactgactaagaaaacagccctttttact
gctaaacctcttaaaccaggagtgctgacagcattggggacatcttataaattaggattg
tcttcaagtgatagttcagaagacactgaacatgatactagctattctgtgaaagactat
caaccgtttaatattcttggtcggagattgaataaaacgaaagatgaaagatgtggtgtt
atgtacggtactgatcaaagattgaattttcatgttctccctgttttgccaaaaatgtcc
gcaacatttgataattttccaaccacaatggtgtgcaatgaagttgtcaatacaacaata
aggctacagaatacgggcaatgttcaacttgatatcgtcaagatacttgcgaatgacaaa
gttcagtttaccatatgcggtacaaatggtcacaagtttattttacccaatgttgttaca
accgattcaaaatctaagaagattaaatttactaatgtgttgtcagagcctttattacca
ggaaaatctgtgaaaatggacgtttgcattaaagcacctgcaactagtggaattcatcaa
gcagatgctttagtgtactgtaaatcaaattgtattgttgatggaccatcgggtcgtact
ttcttcattagaaatcatattgaatgtacagaaggtgttgatattctggctgaattaatg
actcctgtgaaccaagaaaattttataatatctttacgggtacgaaatgcttcaacgaaa
gattcatggatgctttttattgaggatgtaacatgctcaaattcaagctgtgttgtagaa
atagtgggtgataaaaagctaccagctttatcagtaaacaaccatctatatatgtacctc
aatctggcaaagaagtttgatgttgattctgagaagcgagatttgtacgagccccctgaa
atcatcattcattggaaaggtggttataatgatgcgtttatgtacggccaacaccaattg
gatttaaaagatctttttgaaggtctaggtacattctcaacccctgaaactatgcctgtt
aaaatttctgataacatgcccaaatcagcagaggaattttctcttcaaactttacatcga
ttagtaacatggagactcaggtataattctacaataaaacatgattttactgcgaacaat
ctatgtcatactgatatgacattaatggtgtataatctcagcaatttgaagctgcatgta
accgtcagtttgccgaatgtggaggacaattttggaaaacgtcaatctcatacggacttt
gcatgggttggtgctaccgaagcaaagagacttctcgctcctcacagtgaaatcaaagta
aatttgaaggcttgttttgcgcgtaggggtgtatttaacgtcagtggtgtgagcgtgaca
gctattccgatgcatcttatgggaacgacacctcaaattcctcaaaaaccaccttgtgga
tatttcataaatattgaatag
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