Styela clava (leathery sea squirt): 120329362
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Entry
120329362 CDS
T07291
Name
(RefSeq) homeobox protein SIX1-like
KO
K19473
homeobox protein SIX3/6
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120329362
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120329362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
120329362
NCBI-ProteinID:
XP_039251903
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MKLFPRVEIAESNDDSDSEKSANSISSAEDIQQTPCVSGKYFPLSLPNIAASMERLKNML
NFVQQRSNTTPMFPLPVPTLGSTQISTVCDALAENGDIERLARFLWSLPATPSIMEALQT
DESILRARALVAFHQGNFREVYGILEQHRFTDAAWHHRLQAMWLEAHYQDAERSRGRSLG
PVDKYRIRKKFPLPRSIWNGEQKSHCFKERTRNCLRESYLRDPYPNPSKKRELARLTGLS
PTQVGNWFKNRRQRDRAAAAKNRVMHHEQNGGDHMSSTLNIQQGTTRQNSIEEQLNHYRE
LSSPGDLDTSKNVLGFSTPSPTLNDQNTSTELMMSSMFRQKTNDSSPQKNSENSERSAFA
EFSKSSSFMLNHHAFLPFGDTLGSRNNPNFRNTFGSPEKTIDNTDAQNLNIHK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtttccacgggtagaaattgcggaaagcaatgatgattctgattcagaaaaa
tcagccaattcaatttcgtctgccgaagatattcaacaaacaccatgtgtttcgggaaaa
tatttccctctcagcctcccgaacattgctgcttctatggaaagattaaagaatatgtta
aattttgtgcaacaacgttctaatacgacaccgatgttccctctacctgttcccaccctt
ggatcaacccaaatttcaacagtttgcgatgctttggcggaaaatggagacatcgaaagg
cttgctcgatttttgtggtccctgcccgcgacaccttcaattatggaagctttgcaaaca
gacgaatcaattttaagagcaagagcacttgtagcatttcatcaaggtaactttagagaa
gtctatggtattttggaacaacatagattcactgatgctgcatggcaccatcgattgcaa
gcgatgtggttagaagctcattatcaagatgccgaaagatcacgaggccgttcacttggt
ccagttgacaaatacagaataagaaaaaagtttccattaccgagaagtatttggaatgga
gaacaaaaaagtcattgtttcaaagagagaacaagaaattgtcttcgagaatcttatctc
cgagatccatatccaaatccgagcaaaaagcgtgaacttgcaagattaactggtctttcg
cctactcaagttggaaattggttcaaaaacagaagacagagggatcgtgctgctgctgcg
aaaaatagagttatgcaccacgaacaaaatggcggagatcacatgtcgtcgacattaaat
attcagcaaggtacaacgcgacaaaattcgatcgaagaacaactgaatcactacagagag
ctatcaagtccaggcgatctcgatacttctaaaaatgtattaggattttcaacgccatct
ccaactcttaatgatcaaaatacgtcaacagaactgatgatgtcatcgatgtttcgtcaa
aaaactaatgattcctcaccgcaaaaaaattcggagaattcagagcgttcagcatttgct
gaattcagtaaatcttcgagttttatgttaaatcaccatgcgtttctaccctttggagac
actttgggtagccgcaacaatcccaacttcagaaatactttcggatccccggaaaaaacc
atcgacaacaccgacgcacaaaatttgaatattcacaaataa
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