KEGG   Styela clava (leathery sea squirt): 120329439
Entry
120329439         CDS       T07291                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv04137  Mitophagy - animal
sclv04144  Endocytosis
sclv04145  Phagosome
sclv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120329439
   04145 Phagosome
    120329439
   04137 Mitophagy - animal
    120329439
   04148 Efferocytosis
    120329439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sclv04131]
    120329439
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sclv04147]
    120329439
   04031 GTP-binding proteins [BR:sclv04031]
    120329439
Membrane trafficking [BR:sclv04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    120329439
 Endosome - Lysosome transport
    120329439
Exosome [BR:sclv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120329439
  Exosomal proteins of other body fluids (saliva and urine)
   120329439
  Exosomal proteins of colorectal cancer cells
   120329439
  Exosomal proteins of melanoma cells
   120329439
GTP-binding proteins [BR:sclv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    120329439
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 120329439
NCBI-ProteinID: XP_039251999
LinkDB
Position
Unknown
AA seq 215 aa
MAARSPQQRPNGPGGPGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLQDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
RQASPNIVIALAGNKADLSNKRMVELDDAQAYAEENSLLFMETSAKTAMNVNDIFLAIAM
KLPKNEQGTNANRQRTVDLRQNEQQSESKSCCGSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctgcacgatccccacaacaaagaccgaacgggcctggaggccctgggaaaatctgt
cagtttaaacttgtacttctcggcgaatcagctgttggaaaaagtagcttggtgttgcgt
tttgtaaaagggcaatttcatgagtatcaggagtctacaataggagccgcgtttctcaca
cagacagtctgtcttcaagatacgacagtaaaatttgagatatgggataccgccggtcag
gagcgataccacagtcttgcgcccatgtattacagaggtgctcaagcagcaattgttgtc
tatgacatcacaaaccaggaaacgtttgcccgagctaaaacatgggtcaaggaactacag
agacaagcaagccctaacatcgtgattgcgcttgctgggaacaaggctgatctttctaat
aaaagaatggttgaactggatgacgcacaagcctatgctgaagagaacagtctgttgttc
atggagacttcggctaaaacagcgatgaatgttaatgatatatttcttgctatcgccatg
aagcttccgaagaatgaacaaggaacaaacgcaaatcgacagcgcactgtcgatttgagg
caaaacgaacagcagagcgagtcaaaatcatgctgtggaagcaattga

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