Styela clava (leathery sea squirt): 120329439
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Entry
120329439 CDS
T07291
Name
(RefSeq) ras-related protein Rab-5B-like
KO
K07888
Ras-related protein Rab-5B
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04137
Mitophagy - animal
sclv04144
Endocytosis
sclv04145
Phagosome
sclv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120329439
04145 Phagosome
120329439
04137 Mitophagy - animal
120329439
04148 Efferocytosis
120329439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120329439
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120329439
04031 GTP-binding proteins [BR:
sclv04031
]
120329439
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
120329439
Endosome - Lysosome transport
120329439
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120329439
Exosomal proteins of other body fluids (saliva and urine)
120329439
Exosomal proteins of colorectal cancer cells
120329439
Exosomal proteins of melanoma cells
120329439
GTP-binding proteins [BR:
sclv04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
120329439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
120329439
NCBI-ProteinID:
XP_039251999
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MAARSPQQRPNGPGGPGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLQDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQ
RQASPNIVIALAGNKADLSNKRMVELDDAQAYAEENSLLFMETSAKTAMNVNDIFLAIAM
KLPKNEQGTNANRQRTVDLRQNEQQSESKSCCGSN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgatccccacaacaaagaccgaacgggcctggaggccctgggaaaatctgt
cagtttaaacttgtacttctcggcgaatcagctgttggaaaaagtagcttggtgttgcgt
tttgtaaaagggcaatttcatgagtatcaggagtctacaataggagccgcgtttctcaca
cagacagtctgtcttcaagatacgacagtaaaatttgagatatgggataccgccggtcag
gagcgataccacagtcttgcgcccatgtattacagaggtgctcaagcagcaattgttgtc
tatgacatcacaaaccaggaaacgtttgcccgagctaaaacatgggtcaaggaactacag
agacaagcaagccctaacatcgtgattgcgcttgctgggaacaaggctgatctttctaat
aaaagaatggttgaactggatgacgcacaagcctatgctgaagagaacagtctgttgttc
atggagacttcggctaaaacagcgatgaatgttaatgatatatttcttgctatcgccatg
aagcttccgaagaatgaacaaggaacaaacgcaaatcgacagcgcactgtcgatttgagg
caaaacgaacagcagagcgagtcaaaatcatgctgtggaagcaattga
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