Styela clava (leathery sea squirt): 120329913
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Entry
120329913 CDS
T07291
Name
(RefSeq) vesicle transport protein USE1-like
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120329913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120329913
Membrane trafficking [BR:
sclv04131
]
SNARE
SNAP-25[C] (Qc)
Use1
120329913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Use1
TPR_IF140_C
TMEM107
UBR4
DUF7610
Motif
Other DBs
NCBI-GeneID:
120329913
NCBI-ProteinID:
XP_039252638
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MAPAVRSRAEIRLIRLLSRCEEMAGLNTPDDWRLEKYVGALEERLQAVQKLDSSEKPKED
IISEYAKKIKFLKQLLETQKLPVTSEKSLANQLLVPAKSRTIPTNKESPTGKQIQMQASS
RYTTEMRDELMLTEKEKSAGVRYRATSSGGSTQNADTEAILQHQHKMHEKIADEMVALTR
NLKHNIMASNRVIKDDLNVIEKSSKKADQNYGQLQTESSRLESHLKKGTNWWLWISLALV
CAVFMFMIFFIRFFPKRYS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgcagtgagaagccgagcagagattcgtcttatacgactgctttccagatgt
gaagagatggctggtttaaatacacctgatgactggagacttgaaaagtatgttggagca
ttagaggaacgtctacaagcggtccaaaagcttgattcctcggaaaaacccaaggaagat
atcatcagtgaatacgcaaagaaaattaaatttttaaaacaacttttagagactcaaaaa
ttacctgtcacgtcagaaaaatctctcgctaaccaacttctcgtgccagcaaagtctcgg
acgattccaactaataaagaatctccgacgggaaagcagattcaaatgcaggcatcgtcg
agatacactacggaaatgcgcgacgaactcatgctcacagagaaggagaaatcagccgga
gtgcgctatagagcaacgtcttctggtggaagtacgcaaaatgcagacactgaagctata
ctgcagcatcaacataaaatgcacgaaaaaatcgctgacgaaatggtcgcgttaacaagg
aatttaaaacacaacattatggcttctaacagagttataaaagatgatttgaatgtgatc
gaaaaatcttctaaaaaagctgatcaaaattacggccaacttcaaaccgagtcgtcacga
cttgagagtcatttaaagaaaggaacgaactggtggctgtggatatctcttgctcttgtc
tgcgctgtgtttatgttcatgatattttttatcaggttttttcccaaaaggtactcttga
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