Styela clava (leathery sea squirt): 120329922
Help
Entry
120329922 CDS
T07291
Name
(RefSeq) TBC1 domain family member 5-like isoform X1
KO
K18469
TBC1 domain family member 5
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120329922
Membrane trafficking [BR:
sclv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120329922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120329922
NCBI-ProteinID:
XP_039252649
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MKMSEHTATLNSYLNQWSKYFEENGDELLTRLRNFAFEGELRSCKFRSICWRIFLNCLPS
DIEKWKNTIEISRQHYVDIKNKHVTIPSHEAEEKDLDVENPLSQNDQSSWMKFFRNSDLK
KTIERDVKRTYFLRFPEMEYFHNEAVHELLVNVLFCYAQEHSDLSYRQGMHELLAPLVFI
IHCDLQAACHAREIGHINKDLIDVILNEEYLEHDSYDMFCKLMESTNAWYSITERVSKEK
IKDDGISEDDKSTKSDTGNPIPKRPFQPQEIATSGGPTLAITNKLNHIHNTLLVQHDLQL
HTHLNRLEIIPQVFGLRWIRLLFGREFSLQDLLVLWDAMFADSSTLDLVDYLFVAMLIHI
RNHLLTADYSSCMQLLMRYPPVDDINDIVKAAKDIRQLKTRSFSDSLIEASADASVNKIQ
RGPKKNVTQPLTASQRQNSNKQNSLSRMFKDFTRKVIPENKPIVPTHSSLNDPTYAGDVR
SPAQAKTRTSPQWNMNGNPPFFKNSSTITEAPRAEEMHREHPAQLEEEVIYLHKELEKMK
QMCLYCSDKIDASVTVLQSSVNLTTDEDDNNENGQQNSNDSMQKNSTASQQQKFEKEQIL
VTVASLKQIRDLLQGSLTFNPNLKEYKNKKKTNNINNSEPKIENGNDPGVQQPVPQSIVN
TNADAGDA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtcagaacatactgcaacgctaaatagctacctgaatcagtggtcaaaatat
tttgaggaaaatggtgatgagcttttaacgagattgaggaattttgctttcgagggagaa
ctccgaagctgtaaatttcgaagcatttgctggagaatattcctaaattgtcttccttct
gatatcgaaaaatggaagaatacaattgaaatttcaagacaacattatgttgatataaaa
aataaacatgttaccattccctctcatgaagcagaagaaaaagatctagatgtggaaaat
ccattgtctcaaaacgaccagagctcatggatgaagttttttagaaacagtgacttgaag
aagacaattgaacgtgatgttaaaagaacatattttcttagatttcctgagatggaatat
tttcacaatgaagccgttcacgaacttcttgtcaacgtacttttctgttatgctcaagaa
cacagcgatttgtcatatagacagggaatgcatgaactgcttgcaccactcgttttcatc
atccactgtgacctacaagctgcttgtcatgctagggaaattgggcatataaataaagat
ttgattgatgtcattttgaatgaagaatatttggaacatgattcatatgacatgttttgt
aagttaatggaaagcactaatgcctggtattccattactgagagagtgagtaaggagaaa
atcaaggatgacggtatttcagaagatgataaatccactaaatccgatactggtaatcca
atacctaaaagaccatttcaaccccaggaaattgccaccagcggaggaccaacattggca
ataacaaacaaattgaaccatattcataataccctgcttgttcaacatgatctacagctt
catacccatttaaatagattggaaattattccgcaagtttttggacttcgttggataaga
ctactttttgggagagagttttcactccaggacctacttgtattatgggatgccatgttc
gctgatagttccacattagatcttgttgactatttattcgtggcaatgttgattcatatc
agaaatcatttgctcactgcagactacagttcatgtatgcaattgttaatgagatatcca
ccagttgatgatataaatgatatagtgaaagctgctaaagatataaggcaactgaagaca
agaagcttttcggacagtcttattgaagcaagtgctgatgcatcagtcaataaaatccaa
agaggacccaagaaaaatgtcacacaacctctcacagcttcgcaacgtcagaattctaat
aaacaaaacagtctcagcagaatgtttaaggatttcacgaggaaagtgattcctgaaaat
aaacccatcgttccaactcatagtagtttgaatgatccaacttatgcaggtgatgtgaga
tctccagctcaggcaaagacacgaacttcaccacaatggaatatgaatgggaatcctcca
ttttttaaaaactcttcaactattactgaggctcccagggcagaggaaatgcatagagag
catcctgcacaattggaagaagaagttatttatttacataaagaacttgaaaaaatgaaa
cagatgtgcttgtattgctcggataaaattgatgctagtgtcactgttttacagtcaagt
gtgaatttgactacggatgaagatgacaataatgaaaatggacaacaaaattctaatgat
tctatgcaaaaaaattcaactgctagtcaacaacagaagtttgaaaaagaacaaatttta
gtcactgtagctagtttgaaacaaattcgtgatttacttcaaggatctttgaccttcaac
cccaatttaaaagagtacaaaaataagaagaaaacaaacaatatcaacaactctgaacca
aaaatcgaaaatggaaacgatccaggggtgcagcagcctgttccacagtcaattgttaat
acaaatgctgatgcgggtgacgcttaa
DBGET
integrated database retrieval system
