KEGG   Styela clava (leathery sea squirt): 120330126
Entry
120330126         CDS       T07291                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120330126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sclv03041]
    120330126
Spliceosome [BR:sclv03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120330126
 Complex B
    120330126
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_9
Other DBs
NCBI-GeneID: 120330126
NCBI-ProteinID: XP_039252898
LinkDB
Position
Unknown
AA seq 499 aa
MDQNQQAFMKQEAGPDSYENGGYPPGNNQGYGEDIKPQGGNEDRRDRKRRDRSRDRDHDR
RRSRDRDRDRDRKRRSKSREKRRRRSRSRENRKRRSRSRSKEKPTTATKKKKQYKYWDVA
PSGFEHLTPLQYKAMQAAGQIPLMATTPSLGTGTPTGPAAPLPGTQMTRQVCPFYLFQAR
RLYVGNIPFGVTEDAMMDFFNQQMKMSGLAQAPGNPVLAVQINLDKNFAFLEFRSVDETT
QALAFDGINFMGQSLKIRRPSDYKPLPGSSETPSVHLPGVVSTVVQDSLHKVFVGGLPNY
LNEDQVKELLTSFGPLRAFNLVKDSATALSKGYAFCEYVDATITDQAIAGLNGMQLGEKK
LIVQRASVGAKTGLMNMLSTPVTLQVPGLVTAAQQGPVTEVICLLNMVTPEELQDEEEYE
DIMEDVKDECNKLGKVKSLEIPRPVPGTDVPGVGKIFVEFMDTSDSQNACNALSGRKFAN
RVVVTSYYDPDRYHRREFD
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggaccagaaccaacaggcctttatgaagcaagaggctggtcctgattcatatgaaaat
ggtggttatccacctggaaataatcaaggatatggagaagatataaaaccacaaggtggc
aatgaagacaggcgtgatcgtaagaggagagacaggtcacgtgatagagatcatgaccgg
agacgcagcagagatcgggatcgtgatagagataggaaaagaagaagcaaaagcagagaa
aaacgtcgaaggcgatcgaggtcaagagagaatagaaagcgacgcagtcgatctcgaagc
aaggaaaaaccaactacagctacaaagaaaaagaaacaatacaaatattgggacgtggca
ccatctgggtttgaacacctcaccccacttcaatacaaggccatgcaagcagctggacag
atccctcttatggctacaactccaagtcttggcaccgggacacctacgggtccagcggca
cctctaccggggacacagatgactcgtcaggtttgtcctttctacttgttccaagctcgg
agattatatgtgggtaacataccttttggggtgacagaggatgccatgatggattttttc
aatcaacaaatgaaaatgtctggtcttgcacaagcgcccggaaaccctgtattagctgtt
cagataaaccttgacaaaaattttgcttttctagagttcagatctgtggatgaaactaca
caggctcttgcttttgatggtataaatttcatgggtcaatcattgaaaattcgacgacca
agtgactacaaaccactgccaggatcttcagaaacaccttctgttcatctgccaggtgtt
gtttcaactgtcgtacaagattctctacataaggtatttgttggtggtctaccaaattac
ttgaatgaagaccaagtaaaagagttgttgacttcatttggtccgcttcgggcttttaat
cttgtgaaagacagtgctacggctttatcaaaaggatatgcattctgtgaatatgtggat
gctacaatcaccgatcaagccattgctggattgaatggaatgcaactgggtgaaaagaaa
ctcattgtacaaagagcaagtgttggagccaagactggattaatgaacatgctgtcaaca
ccagttactctacaggtacctggtcttgtaacagctgcgcaacaaggaccggtcacagaa
gttatatgtcttctcaatatggtgacaccagaagaattacaagatgaagaagagtacgaa
gatatcatggaagatgtgaaggatgaatgcaacaaacttggaaaggtgaaaagcttggag
ataccacgaccagttcctggtacggatgtgcctggagttggcaaaatctttgtggagttt
atggacacaagtgattctcagaatgcctgcaatgctctctctggaagaaaatttgccaac
agggtggttgtcacatcttactatgatccagaccgctatcatagacgtgaatttgactaa

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