Styela clava (leathery sea squirt): 120330267
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Entry
120330267 CDS
T07291
Name
(RefSeq) prolow-density lipoprotein receptor-related protein 1-like isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120330267
Membrane trafficking [BR:
sclv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120330267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_TSH7A-B_C
Ldl_recept_b
ANTH
Motif
Other DBs
NCBI-GeneID:
120330267
NCBI-ProteinID:
XP_039253080
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MNTWSIAIPILLWVFYVEGCRYRKTGNSLLDSRKQISADNDVDQELSNFFSSCMFQKTGS
VFPSWISVVDFVLRDTRWFSASDEQFCKEKMSGEINSVECWQHRMDRLVRNGSELLSPAK
DCVAEYLFEYDFVNGRAKFTTPSTTGIEYCLDGTEEEYNQCVFNKLLTTSNKKKYSSLRD
YHQGSVEQFVKNHISNCRIKNAQILGSHVYTEDCTIHSSENSRLCISTVFQEIVKASSPL
YEATTKCIVQLSQKSAEKPPEKMASNKRCDLIICTQDHQHCDENKGVCICDSGYKYNLGK
CRLISNKTTENANSKCNDVTCGGVHQHCDEDNGNCVCNDGYEEVSGQCQTAVVPSSADKL
DSENKCSGVTCEEPHQRCDAEVGACVCDVGFKNVSGKCTEDNKETKPNENKTVGRCRLIT
CIGLHQHCDEEMGACVCDEGYKYISEKCQKVKHNYSKDHNMATYKCQRTICGKQHEHCNE
MDGTCICDDGYKNVTGQCVPVQQTLNEDETMKDVQDSFPIESILFTLFDEKKENARVRYL
SANSSMTQVIDGDLAMKTLMDMLDGKDADYWGMVASYETGKIYFNDYKQACLHEYDAHSN
KIEAIANDLTGGLENLEYDRITNVLYWTDSIDKTIIAMEGTYQHFTKIYQSDSVAPYGLA
LHTTKRMLFFSVYKLEKGFISDSALVKCDLDGGNQESILQFPYVIRPRSLAIDYATDNIY
WTDVSMHGDSLVMMSKLDGTQSKSIFSRETGYFWGIAISQENIYVTNTLNVTTDKYETYV
IRKDGRSHSTITTNTKPRHVSVYASNEVSTVPVKNECEFNKCDHICLSSSTGEHRCMCSS
GFQLKFGSICETSPLLNDYLLVADIGQKGLFQIPFDDKEENLGNMTAIDVHTTEKIYAVA
VDPSNGEMAWYDLEKEEIFWGHRILSFGEAVSSIVIHPCEEKIYWASITGIYSWDGKRSF
AIKTLYTSSVFTNMEIREIEIDFLRSRIYWTEYDALFQKGRIMQSNLDGKNRKRVLDTKI
VKGMTIDYETDTMYVMSMVDGTMYSIQLDQANKLPLNQNAYSVTKITPFLKEGTFLIFDV
SVFNGWVYLADSEASHIHRFDLKKGPSSMESHGPSEFFFVPTMTFYSEDYFKNYIKDKCP
TDESSTSPPNYDNVEVETGDDDCEEILLNGSFSDYLDCMFGLLEAIM
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtggagtattgcaattcctattcttttatgggtattttacgtagaaggatgc
cgctacaggaaaactggcaactcattactcgacagtagaaaacaaatatctgcggacaat
gacgtagaccaagaactcagcaatttcttttcaagctgtatgtttcagaaaactgggagc
gtttttccttcttggataagtgtagttgacttcgttctacgggacacgagatggttttct
gcatctgatgagcagttttgcaaagaaaaaatgagcggagaaatcaattcagtggaatgc
tggcaacatcgtatggatcgacttgttcgcaatggatccgagctgttgtctcccgctaaa
gattgtgttgctgaatatttatttgaatacgattttgttaatggccgagcgaaatttaca
actccttcaacaacgggaatagaatattgcttggacgggactgaagaggaatacaatcag
tgcgtgttcaataagctgttgactacaagtaacaagaaaaagtattcgtctttaagagat
taccaccaaggatctgtagagcagtttgtaaagaaccatatttctaactgcagaatcaag
aatgctcaaattcttggaagtcatgtttacacagaagactgtacaatacattcttctgaa
aattctcgactgtgcatatcaacggtatttcaggaaatagtaaaagcatcctctccactc
tacgaagcaacgacaaaatgtattgtacagttgtctcaaaagtcggcagaaaaacctccc
gagaaaatggcatcaaacaaaagatgtgatctgataatctgcacccaagatcatcaacac
tgcgatgagaacaaaggtgtatgtatatgtgattctggatataaatataatttaggaaaa
tgcaggctcatttctaataaaactacagagaatgcaaatagcaaatgcaatgatgttact
tgcggaggagtacaccaacattgcgacgaagataatggaaattgtgtgtgcaatgatggg
tatgaggaagtatctgggcaatgccagaccgccgtagtcccatctagcgctgataagctt
gattctgaaaataaatgcagtggtgtgacttgtgaagaaccgcaccagcgctgtgacgca
gaagtgggtgcgtgcgtttgcgacgtcggttttaaaaacgtttcaggaaagtgcacagag
gataataaagaaacaaaacctaacgaaaacaaaacggttgggagatgtcgcctgataaca
tgcattggactgcatcagcactgtgatgaagaaatgggggcgtgcgtttgtgatgagggg
tacaaatacatttctgagaaatgtcagaaagtaaagcacaattattcaaaagatcataat
atggcaacatacaaatgccaacgcacaatttgcggaaaacaacatgaacattgtaatgag
atggatggtacatgcatatgtgatgatggatataaaaatgttacaggacagtgtgtaccg
gtacagcagacgttgaatgaagatgagactatgaaggatgtccaagattcatttccaatt
gaatctattttgttcacactgttcgacgaaaaaaaagaaaatgctcgcgtccgctactta
tcggccaattcatcaatgacacaagtcatcgacggcgacctggcgatgaaaactttaatg
gacatgcttgatggaaaagatgctgattattggggaatggttgcaagttatgaaaccggg
aaaatatattttaacgattacaagcaagcttgcctccatgagtatgatgcacatagcaat
aaaattgaggccattgcaaatgatttaaccggtggattggagaacttggagtatgatcga
ataacaaacgtactatattggactgattcaatagataaaacgatcatagcaatggagggc
acatatcaacattttacgaaaatatatcaatctgattcagtagcgccatatggactggca
ttacatactacaaagaggatgctatttttctctgtgtacaaattggaaaaaggatttatc
tcagattcagctttggtcaagtgtgatctagatggcggaaaccaagaaagtatattgcaa
tttccatatgtgatcagaccacgaagtctcgcaattgactatgccacagacaatatttat
tggaccgacgtgtcaatgcacggagattctctggtaatgatgagcaaattagacggaact
caatcgaaaagcatattttcaagggaaacaggttatttctggggaatagctatctcacag
gaaaatatttacgtcaccaatacgctgaacgtcacaacagacaaatacgaaacatacgtc
atacgtaaagacgggagatcccattccaccatcacgaccaatactaaaccacgacacgtg
tcggtttatgcttcaaacgaagtatccacggtaccagtgaaaaatgaatgcgagtttaac
aagtgtgatcacatatgtctttcgtcgtcgaccggtgaacatagatgcatgtgctcttct
ggctttcagttaaagttcggttcaatatgtgaaacaagtcctctcctgaacgattattta
ctcgttgccgatatcggacaaaagggtttatttcaaataccattcgacgacaaagaagag
aatctaggaaacatgactgcaatagatgttcacacaacggagaaaatatacgcggttgcc
gtggatccaagcaacggtgagatggcatggtacgacttggaaaaagaagaaattttctgg
ggacatagaatattgtcatttggagaagccgtttcaagtatagttatacatccttgtgaa
gaaaagatatattgggcttcaattacgggaatatactcatgggatggaaaacgatcattt
gcaattaaaactttatatacatcttcagttttcacaaacatggaaattcgagaaattgag
atcgactttttacgaagtcggatttactggacagaatacgatgctctatttcagaaagga
cggattatgcaaagtaatttagatggaaagaacagaaaacgggtgcttgacaccaaaatt
gttaaaggaatgacaattgactatgaaactgataccatgtacgttatgtcaatggttgat
ggcactatgtattcaatacaactggatcaagccaataaactaccactgaatcaaaatgca
tacagcgtcactaaaatcacaccatttttaaaagagggaactttcctaatattcgacgtt
tctgttttcaacggctgggtgtacctcgccgactctgaagcttcacacatacaccgcttt
gatctcaaaaaaggtccctcatcaatggaatcgcatggtccatcagaattcttcttcgtc
ccaacaatgactttttacagcgaagactattttaaaaactatataaaagacaaatgccca
actgacgagtcgtcaacgagtccaccaaattacgacaatgtagaagttgagacaggtgac
gacgactgcgaagaaatattattaaacggaagttttagtgactatctcgattgtatgttt
ggacttcttgaagcaattatgtaa
DBGET
integrated database retrieval system
