Styela clava (leathery sea squirt): 120330478
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Entry
120330478 CDS
T07291
Name
(RefSeq) decapping and exoribonuclease protein-like
KO
K14845
RAT1-interacting protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120330478
03009 Ribosome biogenesis [BR:
sclv03009
]
120330478
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120330478
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120330478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAI1
Ycf54
Motif
Other DBs
NCBI-GeneID:
120330478
NCBI-ProteinID:
XP_039253372
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MSKDSEFKTLDISGYSSHSKKPKHVTFSKPVEIGAFSIDGQRKFCNNLSQMSYVEDTSRW
CKNMDLNDGYKDRFVKRDENVKERLDNLLRWVVSNLHRFKNGNTTKESKSSSLAALPDFI
LWRGHMTKIMCTPYEYQEGWEMAAQKLGSTIYISEVETLQAEKRRSNSTDREKLMTYWGV
RFEKYMTRPDPPHNRNEAKCPRLVPIDQSKIVVNTNEAYCTVMNVQLNSHKIIHSAEVDC
CQNPSEGLTPPDNYIELKTSREFSTQKHEDNFHRYKTKKWWAQSFLAGVPQITCGFRDDN
GVIVSIRHFKTLDLPRMARQVPHGAWDANVCLDFLNNFFDFVKNVYSGVQEDEKCVFLFS
WRAKEDKVICTRYNLPTKHEFLPEWYKISLSYL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggattcagaattcaaaactctagatattagtggatattcatcccattcaaaa
aaacctaaacatgtaacattctcaaaacctgtggaaattggagcgttctcaattgatggc
caacgcaaattttgcaataatctcagccagatgtcttatgttgaagatacttcgagatgg
tgtaaaaatatggatctaaatgatggttacaaagaccgatttgtgaaaagagatgaaaat
gtaaaagagcgacttgacaatctgttgagatgggtggtttccaaccttcatcgtttcaaa
aatggcaatacaactaaagaaagtaaaagttcttcattggctgctttaccagattttata
ttgtggagagggcatatgacaaaaattatgtgcacgccttatgaataccaagaaggctgg
gagatggctgcacaaaaactaggttcaacaatttatatcagcgaagttgaaactctgcaa
gcagaaaaaagacgttcgaacagcactgacagagaaaagttgatgacctattggggtgtt
cgtttcgaaaagtacatgacccgaccagatcctccacataatagaaatgaagcaaaatgt
ccacgattagtacccatcgatcagtcgaagattgtggtaaacacgaatgaggcttattgt
acagtaatgaatgtgcaattgaattctcataaaattattcatagtgctgaagtggactgc
tgccaaaatccttctgagggtttaacaccgccagataattatattgagttgaaaaccagc
agagagttttctactcaaaaacatgaagacaattttcataggtacaaaacaaaaaaatgg
tgggcacagtcatttctagctggtgtgccccagattacatgtggtttcagggatgacaat
ggcgttatagttagtattcgtcatttcaaaacattggatttaccgaggatggcacggcaa
gttcctcacggtgcttgggatgcaaatgtctgtcttgactttttgaacaatttttttgat
tttgttaaaaatgtttatagtggtgtacaagaagatgaaaaatgtgtatttctattttct
tggagggccaaggaggataaagttatatgtacacgttacaatttgccaacaaaacacgag
tttttgcctgaatggtacaagatctcattaagttatctataa
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