Styela clava (leathery sea squirt): 120330647
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Entry
120330647 CDS
T07291
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120330647
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120330647
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120330647
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
120330647
NCBI-ProteinID:
XP_039253458
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MKLVTWNINGLRSMKGPIKPFLDGLDADIICFQETKITKDQIESDLALVDGYSSYFSFSQ
TRQGYSGVATYCKTNTTPFLAQEGLFDFAEKSAGNGAIMHYGDLSSKFSQERLYEVDKEG
RTIITQHEFYDSAKKRNEKLTVINVYCPRADPEKPERQVFKMDFYNMLETRANAILNSGR
HVIICGDINTSHRRIDHCDPNDPELFYDNPCREWMDGILYNKGDYSALIHLNLNSIQTEF
CEGFENIKNVLCEKDSSTDGTESNTEEFTQQNLKQDSENIDICNNNRAKFIDTFRYFFPH
RKNAFTCWNTMKSCRETNYGTRIDYILANSEFHINYVKNCDILPEIYGSDHCPVKADINV
TMIPASKCPPCCTKYMTEFGGRQQTLSSFFSQKAKSKFDDEQLCQSPVKTVVSSSLKTST
QKLSKSSVSNSKKRKHENSSNTVSKQTKLHFFTQNKSSKSKVNMEINTKKSANTLSLSQE
KLEFMPKIDKSFTTKSSTEVSNFWKSVLKGPEPPPLCKGHNEPCFLRTVKKEGPNLGKQF
YCCRRPDGHKTNPEARCSFFQWKT
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgtaacttggaatattaatggcctcagatcaatgaaaggaccaattaaacca
tttcttgatggacttgacgctgacattatatgctttcaagaaactaaaataacaaaagat
caaattgagagcgatttagcattagttgatggatattcttcatacttcagcttttcacaa
acacgccaaggttattcaggcgtggccacatattgtaaaacgaatactacaccatttcta
gcacaagaaggattatttgattttgcagaaaagtctgcaggaaatggagccattatgcat
tatggggatttaagttcaaaattctcgcaggagagattgtatgaagttgataaggaaggg
agaacaataattactcagcatgaattctatgattcagcgaagaagagaaatgaaaagtta
actgttataaatgtctattgtccgagggcagatccagaaaaaccagagcgacaagttttc
aaaatggatttttacaacatgttagaaactcgagcaaacgcaatattgaattcgggaagg
catgttattatttgtggggatatcaatacatcacatagaaggattgatcattgtgatcct
aatgatccagaattgttttacgataatccatgccgagaatggatggatgggatactatat
aacaaaggtgactactctgctctaatacatttaaatttaaactctatccagacagaattc
tgcgaaggatttgaaaatataaaaaatgttttatgcgaaaaagattctagtactgatgga
actgaatcaaatacggaggaatttacacaacaaaatttaaaacaggattcggaaaatata
gatatttgtaacaacaatagagcaaaattcatcgataccttcagatactttttcccacat
cgaaaaaatgcattcacttgttggaacacaatgaaatcttgtcgagaaactaactacggc
acgagaattgattatattttagcgaattctgagtttcatataaattatgttaaaaattgt
gacattttaccggagatttatggatctgatcattgtccagtcaaagcagatatcaatgta
actatgatacctgcatccaaatgtccgccatgttgtactaaatatatgacagaatttgga
ggccgacagcagactttgtcatcctttttttctcaaaaagcaaaatcaaaatttgatgat
gagcagctttgtcaaagccctgtaaagacagtagtatcttcttcactaaagacctctacg
cagaaactttctaaatcatctgtttcaaattccaaaaagcggaaacatgaaaacagcagt
aatactgtaagcaaacagacgaaactccatttttttacccaaaataaatcttcaaaatct
aaagtaaatatggaaataaacactaaaaaatcagccaatactttgtctctttctcaagaa
aaactcgaattcatgccaaaaattgataaatctttcacgacaaaaagctcaactgaagtt
tcaaacttttggaaatcagtactgaaaggccctgaacctcctccattatgtaaaggtcac
aacgaaccttgttttcttagaacagttaaaaaagaaggtccaaacttagggaagcaattt
tattgttgtcgacgtcctgatggacataaaactaatcctgaagcaagatgttcattcttt
caatggaagacctga
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