Styela clava (leathery sea squirt): 120330818
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Entry
120330818 CDS
T07291
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K22656
immunoglobulin superfamily member 9B
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sclv04515
]
120330818
Cell adhesion molecules [BR:
sclv04515
]
Immunoglobulin superfamily
IGSF9
120330818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
C2-set_2
Ig_6
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
MAP17
EphA2_TM
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
120330818
NCBI-ProteinID:
XP_039253695
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MNSRQVLFQVYIIKFLFILTLNFAIYGIEASSPPNVINVHEGTTATLPCEYKHPDPDPPP
SVIEWLRQGQQLPIYIKIGKYPPHMDPSFGALTYESLAKRVNAMAKGRMKVAPGTADLNI
KRIEISDEGWYECRVIFLNKENEKKNLERSQTTESHPPFINGTWTKLVVTAPPVLTSAPP
NTVTSREGEVLLLRCRATGRPTPVITWHKDGWPIKNGQDGIRLGDGELAVTLEKFHKGKY
TCRAQNVEGQVEHTTSVYIQGAPVITEPPKNTTVKEVQDAMFKCRADGYPTNIEYSWFYN
DVPVTSSKIRERVNALDDGTLIIYSPVADDKGTVTCRASNGFGKAPTASATLTVQFPARV
HKMPSILYAGLGLKTELPCPAVAVPPVSTVTWRKNDQVINIEQNKRYSLGENGSLVLEDI
QQRDAARYTCTPYNILGTMGESIGTRLIVRYPPYFTKNPKSTHEAEIGKPLVIQCQGSGD
PPPHVSWIKLDDNGEEEEIQDAENRVSFENGNLTIDSVAKSDHGSWQCVLSNAVASVKTD
VMVYVKYTTPHAVSNISVVTSKQSAQISWTPGYDGGYSQHFMIWYKRADMGDHSWQTQSV
ESFRKVATVSNLEPDTIYQFALLPENVLGSGQFSKTITAKTKEIPPPTPTKEPESVPPPS
RMESHIKKESGLLLLMWQPPIDTTEKDLLGYVIEFRMLLAFDEEDVQEKTLENIEKEDNS
QNLPLEESDKPNIEETETDGRSKRSLWNGIVYARAKREAPVVPPTVSPPITGISKPQERW
SAWATLSPVGANETAFLVPADKLFRDQLYEFQVMALSQSAYSVPSVPITVSTKDLDVYPI
LLEPVPYASAATNPAIIAGVAAAVLFVVIVTVLTSIWCRHHKRRKSALDSATFTFGNLPD
NGFDSRSRTKSESPSHKSVESKSSSKFRDEKLGPLAKLKKKMWKADVEVGNHYSSTEELV
GLGRKVSTKQTSEVTEMDKNGQTLIRKISRASDGKFHVADKCKAPSNQAIDAEESELLMP
QPQVPHKAGVISPSRSSELSHSVEWDPRSPLLQHTPRETPVPENGSESLEIDCSHSDIEV
RYVKDGRGRVRCQSTSMSSLSGPRQYNTHGRQVIPYEPHLDSSYASSAEYHQSPAPYTRQ
SMVSPAPHMPPYAQYVHLRPDNRKMHPEYRVSSPPRLTDYNPTPASPPKYRYHKHSDQPG
GHYHVSPRDSYTNPSERLVFDPRYTRIEPIYEVGPHPNIPPNRHSSFVIDTRRELPHHSQ
PHRAIQIYRTTGAPKDGVNYPKPLWHDQSASRYHTLPHQPQMVQMSHAGAPRHHSDLDNV
EASLIRHNANAAPYSTTAGDIRGPPSTTNTNSLGRSRRKSHEKETDSPRRRVCSVDDLTR
ENPLPANTAHVTERSESLDLLSSRQTKMSNSNTPPTSQPDKDRTRDGSDSGDHGSDVTTT
SSSTNSEKLPRGVLTSRHSDLREENTLPEQQVDVTKVVITNPTSPVREDDSSAVSSLPPP
TEPVIHNGRQLEVTSSGYDSHNTSHASDSPAPSCSSPNVITNRTSSCHDRTSTASSSDRS
RKDTSSVDEKYEWDSEFAMESEILEALRHFGTHKRTGSVSQALVDEIQKLGMDSVQELGK
DDLANLEKTILDHRDNLVQSPSVDTSDMYTKESMERRCAALKKEYQKYQLEQVSLGKKNP
TSPDKSSPAIFATAPTNT
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcgacaagtattatttcaagtttatatcatcaagtttctgtttatcttaact
ctgaattttgccatttatgggatcgaagcaagttcccctccaaatgtaataaacgttcac
gaaggaactactgctactttgccatgtgaatataaacatcccgatcctgatccaccaccc
agtgttatcgaatggttaagacaaggacagcaactgccgatttacatcaaaataggaaaa
tatccgcctcatatggatccttcttttggagcattaacatacgagagtcttgccaagcgg
gtaaacgcaatggccaaagggcgaatgaaagtagctcccggtactgcagatttgaacata
aaacgaattgaaatatcggatgaaggttggtacgaatgtcgtgtgatattcctcaataaa
gaaaatgagaaaaaaaacttggaacggagccaaaccacagagagtcatccaccattcatt
aacggaacttggacaaaacttgtcgttactgcacctcctgttctcacgtctgccccaccc
aatacagtcacctcaagagaaggagaagtattgctgctaagatgtcgtgcaacaggtcgt
ccgactccagtcataacatggcacaaagatggatggcctatcaaaaacggacaggatgga
attcgactcggagatggcgaattggcagtaacattagaaaaattccacaaaggaaaatat
acatgtcgagcacaaaatgtcgaaggacaagtcgaacacactacgtcggtttatattcaa
ggtgctccagtaataacagaaccgcccaaaaatacaacagttaaagaagttcaagacgcc
atgttcaaatgcagagcggacggatatcctacaaatatagaatatagctggttctacaat
gacgtacctgtgacatcatcgaagattcgagaacgtgttaacgctcttgatgatggaaca
ctgatcatatacagcccggtcgctgatgataagggtacagtgacttgccgagcaagcaat
ggattcgggaaggcaccaacagcatcggcgacactaacagtgcaatttcctgctcgtgtc
cataagatgccttctattctatatgctggattaggactcaaaaccgaactaccgtgtcca
gcggtagccgtgccacctgtatctactgtaacatggcgaaagaacgatcaagttattaat
attgaacagaacaagcgttacagcctcggtgaaaatgggagtctagtattagaagacatt
caacaacgagatgccgcacgttacacatgtactccttacaatattctgggtacgatgggt
gagagtatcggaacacgactgattgtacgttacccaccttacttcacaaaaaacccgaaa
tcgacacacgaggcagaaattggaaaacctctcgtgatacaatgtcaggggtcaggggac
ccaccccctcacgtatcatggataaaattggatgacaatggcgaagaagaagagatccag
gacgcggagaacagagtatcattcgaaaatgggaatttaacaatcgactccgtggcaaaa
agcgatcacggttcttggcagtgcgtgttatccaacgctgttgcgtcagtcaaaactgac
gtaatggtttacgtaaaatatacgactccgcatgccgtttcgaatatatccgttgttaca
tcgaagcaaagcgctcaaatatcgtggacaccgggttacgatggagggtattcacaacat
tttatgatttggtacaaacgtgcagatatgggcgaccactcatggcaaactcagtcggtg
gaaagcttccgcaaggtagcgacagtgagcaatttggaaccagacactatttaccaattt
gctcttttacctgaaaatgtactgggaagcggccagttctcgaagactattaccgcgaaa
accaaagaaattccgccgcctacccctacaaaagaaccagaatctgtaccaccgcctagt
cgaatggaatctcatataaaaaaggaaagcggacttttgctacttatgtggcaaccacca
atcgacacaaccgaaaaagatcttctgggttacgtcatcgagtttagaatgttgctcgct
tttgacgaggaagacgtacaggaaaaaactctagaaaacattgaaaaagaagataattct
caaaatttgcctctggaagagagtgataaacctaatattgaagaaactgagaccgacggg
cgctcaaaaagatcactttggaacggtatagtgtatgctcgcgcaaaaagggaagcaccg
gtggtaccgccaactgtatccccgcccatcacaggaatttcaaaacctcaggaaaggtgg
tctgcttgggctacgttatcaccagtaggagcaaacgaaactgcttttcttgtacccgca
gataaacttttcagggatcagttgtacgaatttcaagttatggctctgtcacaatcagcc
tatagtgtccccagtgttcctatcaccgtttcaacaaaagatcttgacgtttatcccata
ctgcttgaacctgtaccgtatgcatctgctgctacgaatccggccataattgcaggagta
gctgccgccgttcttttcgtcgtcatagtaactgtgcttacgtcaatatggtgtcgtcat
cataaacgaaggaagagtgcgttggactctgcgacgtttacgtttggcaatctgcctgat
aatggatttgattcccgttcacgaacgaagtcagaatctccttctcataagagtgttgaa
tctaaatcgtcaagcaaatttcgagatgaaaaactcggacctctggcaaaactcaagaag
aaaatgtggaaagctgatgtcgaagttggaaatcattattccagtactgaagaattagtc
ggactgggacgaaaagtttcgaccaaacaaacatcagaagtaactgaaatggacaaaaat
ggtcaaacattgattcggaagatcagtcgtgcttcagatggcaaattccatgttgctgac
aaatgtaaagcaccttcaaaccaagctattgacgcggaggagtcagaattattgatgcca
caaccacaagtgccacacaaggccggggtgatatctccttcacgtagttctgaactttct
cacagtgtggaatgggatccaagatcaccgctattacaacacacacccagagaaactccg
gtcccagaaaatggaagcgaatcgcttgaaatcgattgtagtcatagtgatatcgaagtt
cgttacgtcaaagatgggcgtggcagagtgcgctgtcaatcaacttcaatgtcaagtcta
tcggggccgaggcaatataacacacatggtcgacaagtaataccatatgaaccacacttg
gactcaagttatgcatccagtgctgaatatcatcaatcacctgctccctatacaaggcaa
agtatggtgtccccagcgccccacatgcccccatacgcgcaatatgttcacttgcgaccc
gacaacagaaaaatgcacccagaatatagggtatcgtcaccaccccgtttgactgattat
aatcccacccccgcgagtccgccaaaatatcgttatcacaagcattccgatcagcccggt
ggccattatcacgtttcgccgagagacagctacactaatccctctgaaagactggttttt
gaccccaggtacactcgcatagaaccgatttatgaagtaggaccgcacccaaatattcct
ccaaatcgccattcatcttttgttattgataccaggcgggagctgccacaccattcacag
ccccatcgggcaatacaaatttacagaactaccggagcacctaaggatggtgtgaattat
cccaaaccattgtggcacgaccagagcgcttcacgttaccatactttaccgcaccagccc
caaatggtgcaaatgtctcatgccggcgcgccacgccaccacagtgacttggacaacgtg
gaggcgtcacttatacgtcataatgccaatgccgcgccatattcaacaacagcaggcgat
attagagggccgccgagtacaacaaacacaaacagtctgggacgatcgcggcgaaaaagc
cacgaaaaagagaccgatagtccgcgcagaagagtatgttccgtggacgatttaacacgg
gaaaatccacttcccgccaacacagcacacgtgaccgaaagatcggaatcactcgatctg
ctttcttcacgacaaacaaagatgtcgaacagcaacacgcctccgacatcacaacccgac
aaggacaggacgcgggatgggtctgatagtggagaccacggaagtgatgtcaccaccacg
tcgtcttccacgaactctgaaaaacttccgcgtggtgtgttgacgtcgcgacactcagat
ttacgcgaggaaaatacgcttccagaacaacaagtcgacgttaccaaagttgtcatcacg
aatccaacgtctccagtccgagaagatgattcttctgcggtttcatctttaccgccccct
accgaacctgtgatacacaacggtcggcagctggaggtcacaagcagtgggtacgatagt
cataacacgagtcacgcatctgactctcccgccccgtcgtgttcgtcacctaacgtcatc
accaatcgaacgtcatcatgtcatgatagaactagcacagcgtcatcaagtgatagatcg
cgaaaagacacctcgtccgtagatgagaaatatgagtgggattctgaatttgcgatggaa
agtgagatcttagaagcgttgaggcactttggaacacacaaacgtacggggtcggtttca
caggctttagtggacgaaattcaaaagttgggaatggatagcgttcaagaactaggaaaa
gacgatttagcaaatcttgaaaagacaattttggatcatcgtgataatttagtacaatca
ccttcggtggatacaagtgatatgtatactaaagaaagcatggaaaggagatgtgcggcg
ttgaaaaaagaatatcaaaaatatcagcttgagcaggtttcattaggcaagaagaatcca
acgtcaccggataaatcaagcccagctatatttgctactgctcctaccaatacctaa
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integrated database retrieval system
