KEGG   Styela clava (leathery sea squirt): 120331012
Entry
120331012         CDS       T07291                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120331012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sclv03041]
    120331012
Spliceosome [BR:sclv03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120331012
 Complex B
    120331012
 Complex C
   U2 SnRNP specific factors
    120331012
SSDB
Motif
Pfam: RRM_1 zf-U11-48K RRM_7
Other DBs
NCBI-GeneID: 120331012
NCBI-ProteinID: XP_039253963
LinkDB
Position
Unknown
AA seq 304 aa
MAAGPISERNQDAMFMSAXLDDKVAEPLLWELFLQAGPVVNAHTMPKDRLQEHIRRYGLW
VEFLGEDDADYSIKILNMINXFGKPIRVNKASFSSEELDVGANLFIGNXRSRNDEKLLYD
TFSAFGVILQTPKIMRDPEXGNSKGFAFINFASFEASDAALEAMNGQYLCNRAITISYAF
KKDSKGERHGKCSKELLAVQNPLSQADRPTQCLQNAPVIHSLAKVNSIMGNAPMPMGMPP
XPPGPPSMMPXPPMPPMGMAPXCPPPPMPPGGLSQTYGWYEFTNEYANASMGHTPYGNGA
DRMA
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcggcaggtcctatttctgaacgcaatcaagatgcgatgtttatgtcggcgnnactg
gatgataaagtagcagagcctttgctgtgggaattatttttacaagcaggtcctgtcgtc
aacgcacacactatgccaaaagatcgcttacaggagcacatcaggcggtatgggttatgg
gttgaatttcttggtgaagatgatgctgattattcaattaaaattttgaacatgataaac
nnttttggcaaacctattcgagttaacaaagcttctttctcatcagaagaattagatgtt
ggtgcaaatcttttcattggaaatnntagatccagaaatgatgaaaaattattatatgat
acctttagtgcctttggtgtcattctacagacccctaaaattatgcgtgatccagaanca
ggaaattcgaagggatttgcttttattaactttgccagctttgaagcatctgatgcagct
ttggaagctatgaatggacaatatttatgtaatagggctatcacaatttcgtacgcattt
aaaaaggattctaaaggtgagcgtcatggcaagtgcagcaaagagttactggcagttcag
aatcctctttctcaggcagacagacccacacaatgtttgcagaatgctcctgttatccac
agcctggctaaagtaaattcaattatgggtaatgcaccaatgccaatgggaatgccacct
ncaccaccaggtccaccaagcatgatgccttagcctccaatgccacctatgggtatggct
cctnnatgccctcctcctccaatgccaccaggtggcctttcgcaaacctatggatggtat
gaattcacaaatgaatatgccaatgcctccatgggccacaccccctatgggaatggcgcg
gaccgcatggcatga

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