Styela clava (leathery sea squirt): 120331050
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Entry
120331050 CDS
T07291
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120331050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclv03021
]
120331050
Enzymes [BR:
sclv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120331050
Transcription machinery [BR:
sclv03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
120331050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
120331050
NCBI-ProteinID:
XP_039254006
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MKKEDDNEDDYAELNKPVSDVKDKWKILPAFLKVKGLVKQHIDSFNYFINVEIKKIMQAN
DKVLSDADPNWYLKYLDIHVGKPDVEESFNVTRSISPHECRLRDLTYSAPITVDVEYTRG
QQRIIRKHLPIGRMPIMLQSSNCVLAGKNPVEFAKLNECPYDPGGYFVCKGVEKVILIQE
QLSKNRMICEKDRKGLVSCSVHSSTHEKKTRATILQKKGKFYLQQNALTEDTPVCIIFKA
MGVESDQAIMQLIGTDESIMSLFASSIEECHRLEVFTQLQATRYIGQKIRRNRGMWGAPR
RSRNDEARDWLATTLLAHVPVIDWNYHCKAVYLGLMIRRSILTQLGKIEVDDRDYYGNKR
MELAGGLVSLLFEDLFKRFNAELKKIADLTIPKPRAAQFDIVRHMRQDPITNGLVIAIST
GNWVVKRFKMERKGVTQVLTRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITVDVEEEPTARLVLNLGVEDIYMLSGEEIYSPLVYLVFL
NGNVLGVIRNHKKLVRTLRIMRRNGYLDDFISVCTNHAHRSVYISSDGGRLCRPYILVNK
GMPLVKSSHMEELQRGLRSFDDFLRDGLVEFLDVNEENDCNIAIVEKDIGFHTTHLEVEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIALNQRNRIDTLMYLLCYPQAPLVK
TRTIELINFEKLPAGQNAIIAVMSYSGYDIEDALVLNKASLDRGYGRCLVYRNQKCTLKR
YANQTFDRVMGPALDAETRKPIWKHEILDADGICKPGEKVESKQVLVNKSCPMQTSIIQS
GDPQQKQTSFQDVPSSYRGPIPSYIEKVMVSSNTEEAFLIKILLRQTRRPELGDKFSSRH
GQKGVTGLIVPQEDMPFNEFGICPDVIMNPHGYPSRMTVGKLIELLGSKAGAVEGKFHYG
TAFGGDKVEDLSKVLVDHGFNYAGKDCLTSGITGEHLEAYIYHGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDSFEVEVCG
ECGLLGYSGYCQFCKSSRAIAKIKMPYACKLLFQELTSMNIVPRLKLKPYNEE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaggatgataatgaagacgattatgcggagttgaataagccggtttctgat
gtaaaagacaaatggaaaatattaccggcgtttctcaaagtaaaaggcttggtgaagcaa
cacatcgattcgtttaattattttatcaacgtggagatcaagaaaataatgcaggcaaat
gacaaagtgctgagtgatgctgatccaaattggtatttaaaatatctcgatattcacgtt
ggaaaacctgacgtggaagaaagtttcaatgtcactcgttctatttcaccacacgagtgc
aggcttcgagatctcacatactcagctccaataactgttgatgttgaatacacaagaggg
cagcagagaattattcgtaaacacctccccattggaaggatgccaatcatgttacaaagt
tcaaattgtgttttagctggaaaaaatcctgttgagtttgcaaagctaaatgaatgtccg
tatgatccaggcggttattttgtttgcaaaggggttgaaaaggtcatattgattcaagaa
caactgtccaaaaaccgaatgatttgtgagaaagatcgaaagggtttggtgagttgttcc
gtgcacagttccactcacgaaaaaaagactcgagcgacaattttgcaaaagaaaggaaaa
ttttatttacaacagaatgcactgacagaagacactcctgtttgtattatttttaaagca
atgggtgttgaaagtgaccaagctataatgcaactcataggaaccgatgagtccatcatg
tctctatttgcatcctctattgaagaatgtcacagactcgaagtttttactcaacttcaa
gcgactcgttatattggtcaaaaaatccgtagaaatcgtggcatgtggggagcaccgaga
cgatcacgaaacgatgaagcgagagactggctggcaacaactttacttgctcatgtgcct
gttattgattggaattatcattgcaaggctgtctacctcggacttatgataagacgaagt
attctaacacagcttggaaaaattgaggtagatgacagagactattatgggaataaaaga
atggagttagcaggtggtctcgtgtcccttttgtttgaagacttgttcaagagatttaac
gcagaattgaaaaaaattgcagatcttacaattcccaaacctcgggctgctcaatttgat
atcgttcgtcatatgagacaagatcctatcaccaatggcctcgttattgcaatatcaact
ggcaactgggtggtgaagagatttaaaatggagagaaaaggtgtcacacaggttttgaca
agattatcgtacatatccgctcttggaatgatgacaagaatttcatcgcagttcgagaaa
acacgtaaagtaagcggtccacgatccctgcaaccttcacaatgggggatgctttgtcct
tctgacacacccgaaggtgaagcttgtggtttggtgaaaaatttggctctgatgactcat
attacagtagatgtagaggaagaaccgactgccagacttgttttaaatcttggtgttgaa
gatatatacatgctttcaggtgaagaaatttactctccactcgtttatctcgtctttttg
aatggaaatgttcttggagtcatcagaaatcataaaaaacttgtgagaacactcagaatt
atgaggaggaatggttacttggatgattttatatcagtttgtacgaaccatgcacatcgt
tctgtctatatttcatcagatggtggaagattatgcaggccttacatacttgtcaataaa
ggaatgccgctcgttaaatcttcgcatatggaggaattacagcgaggattgcgatctttt
gatgattttcttcgtgatggattggtggaatttcttgatgttaacgaagaaaacgattgt
aatattgctattgttgaaaaagatatcgggtttcatacaacgcaccttgaagtggagcca
tttactctgcttggtgtctgtgccggcttaattccttatccacatcacaaccaatctcca
agaaatacttatcaatgtgctatgggaaaacaagcgatgggtacaattgcattaaatcaa
agaaatcgaattgatacattaatgtacctgctttgttatccacaggcacctttggttaaa
actcgaacaatcgaactaatcaactttgaaaaattaccggccggacaaaatgcaatcatt
gcagtgatgagttacagtgggtacgacattgaagatgctttggtgttgaataaagcttca
ctcgatcgtgggtatggtagatgtcttgtttacagaaaccagaaatgtactttgaaaaga
tatgctaatcaaacatttgatcgtgttatgggaccggcattagatgcggaaactagaaaa
ccaatatggaaacatgaaattttagatgccgatggtatttgtaaaccaggagaaaaggtg
gaaagcaaacaggtcctcgtcaacaaatcctgtcctatgcaaaccagcatcattcaatcc
ggtgacccacaacagaaacaaacttcatttcaagacgttccttcttcatacagaggtccc
attccatcctacattgaaaaggtaatggtatcttccaacactgaagaggcatttctcatc
aaaattttgttgcgacaaacaagacgaccagaattgggtgataagtttagttcaaggcat
ggacagaaaggcgtaacagggttaattgtaccacaagaagacatgccatttaatgagttc
ggaatttgtcctgatgtaatcatgaatccgcatggttatccttctcgaatgactgttgga
aagttgattgaacttcttggaagtaaagctggtgcggttgaagggaagtttcattacggg
acggcatttggtggtgacaaagtcgaagatttatccaaagttttagttgatcatggattt
aattatgctgggaaagattgtcttacttctggaataacaggcgaacacttggaagcctat
atttatcacggaccagtttattatcaaaaactgaagcacatggtcctggataaaatgcat
gccagggccagaggaccaagagccgttcttacaagacaacccacagaagggagatctagg
gatggcggtttacgtttaggtgaaatggaacgtgattgtctcattggatacggggcgagc
atgcttctacttgaacgactcatgatttcgagtgattccttcgaggttgaggtttgcgga
gagtgtggattactcggatattctggatactgccaattctgtaaatcttccagggctatt
gcgaaaatcaaaatgccatatgcgtgtaaactgctttttcaagaacttacttcaatgaac
atagtccctcgtttgaaattaaagccttacaatgaagaatga
DBGET
integrated database retrieval system
