Styela clava (leathery sea squirt): 120331104
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Entry
120331104 CDS
T07291
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120331104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120331104
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sclv04147
]
120331104
Membrane trafficking [BR:
sclv04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
120331104
Exosome [BR:
sclv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120331104
Exosomal proteins of colorectal cancer cells
120331104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF7366
DUF218
DMAP1
TssO
BBL5
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
120331104
NCBI-ProteinID:
XP_039254070
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MDRWSWDSSHDSSQILTRQNGIKLYDGDDGTSFEDGILQLTPTKIIWTDSRNQNCNLLLS
LSLIVQVEKTSGGIGKAPKLVLHLSRPDANKPPGPVAHSRNNFIRIGFKNHGDSEFYSAM
MNALKNREWEKRPQQTSTQGGARPQNQGGRIKGGGIVGIERKIEQRHKEAEKNISVAFQD
LTKLMDKAKEMVQLSQAISSKIKDKQGDISEDETIKFKSYLLSLGIPNPVTKETHGTGTH
YHMQLARELSDSLVPELRKRDGIILLSDAYCMINRARGLEMLSPDDMINACKMFESMKLP
VRMKTYDSGVSVIQLETHSEEKSVTQTVALVTDSESLTAQQLANLIEISVFLAKERLILA
EKLGKLCRDDSVEGLRFFVNRFV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctggagctgggatagtagccatgactccagtcagatactgacacgtcaaaac
ggaataaaactttacgacggagatgacggtacttccttcgaggatgggattctacaactg
acaccgacaaaaataatatggacagattcgcgaaaccaaaactgcaatttactgctgagt
ttatcgctgattgtccaagttgaaaaaacatctggggggatagggaaagcccctaaactt
gtacttcatctttccagacccgatgcgaacaaaccaccaggtcctgttgcccatagtcgg
aataatttcataagaatcggctttaaaaaccatggtgattcagaattttattccgcaatg
atgaacgcattaaaaaatagagaatgggaaaaacgaccgcaacaaacttcaacacaaggg
ggagctagaccacaaaatcaagggggtcgaataaaaggaggtggaattgtcggaatcgaa
agaaaaatagagcaaagacataaagaagccgagaaaaatatttctgtcgcgtttcaagat
ttaacgaagctaatggacaaagcgaaagaaatggtccaactttcacaagcgatttcatca
aaaataaaagacaaacaaggagacatttctgaggacgaaacgatcaaatttaaatcatat
ttattgagtctcggaatcccaaatcctgttaccaaggaaacacacggaacggggacgcat
tatcacatgcaacttgcacgagagttgagcgattctctcgtaccagagctgagaaaacga
gatgggattattttactatcggacgcatattgtatgattaatcgagcacgcggactggaa
atgctttctccggatgatatgatcaatgcttgtaagatgttcgagagtatgaaactaccg
gttcgaatgaaaacgtacgatagcggagtttctgtgatacaacttgaaactcacagcgag
gagaaatctgtgacgcaaaccgtagcgttagttacagatagtgagtcgttgactgcacaa
caattggcaaatttgattgaaatttccgtttttctagcgaaagaacgactgattttagcg
gaaaagttgggaaaactttgtcgggatgacagcgttgagggtttgaggttttttgtgaat
cgatttgtgtga
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