Styela clava (leathery sea squirt): 120331257
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Entry
120331257 CDS
T07291
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv00310
Lysine degradation
sclv00514
Other types of O-glycan biosynthesis
sclv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120331257
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120331257
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sclv01003
]
120331257
Enzymes [BR:
sclv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120331257
Glycosyltransferases [BR:
sclv01003
]
O-Glycan biosynthesis
O-linked Gal type
120331257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120331257
NCBI-ProteinID:
XP_039254261
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MLTYTFTIIFILCVGLVKIQRTTCMLEETSEYEDKARDRMFSAKNIISTRGEKTILVAIF
VRNKEHSLPYFLRGLEDLKYDKKLMWLWIISDHNRDNSTKQLETWVRVFNDQYAKIEFEK
PDFPMNYNGDLSDLHWTKDRYIRLLELKQFALIKARKMNVDFILYIDADNILMNPYTLNH
LTGKSQTIIAPMLNSNTDYSNFWGEVDKEGCHKDNDLYDKIRTRKETGTFDVALVHSTFL
INLKNEDSKKVRFLPIPSCYDHDFNDDMIFHYQCDLEDVHMYIDNSVFYGYLPEPQDGLE
DEIYNFMRMRMDAMTLPPVGVGISLRKSVHVPDKEIITSLPVDHVFVINLERNRNRRLRI
NKSFAMYKINYTLFDAVDGRKLNRSYIDSLGIKVPTGYKSPEFGNEMTVGEIGCFLSHYF
VWKKILDEKYESTIIFEDDVQFKPKFIQKFQNVMEKVRNENISWDLIYLERKPAGNEGEE
ETVILQNDSGPNLVQPVYSYWTIAYMISYDGAKKLIDAEPLGKIIAVDVFLAVMYGKQPL
NYINKYFPTKNLNALSFEPTIVKQTHYYSNDYHVSDTANSKFANEILQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttaacatatacatttactatcatattcattctgtgtgttggattagtgaagattcaa
cgaacgacatgtatgttggaagagacttcagaatacgaagataaagcaagggatagaatg
tttagtgctaagaacatcatatcaacgaggggtgaaaaaacaatacttgttgctatattc
gtacgaaataaagaacattcattgccatattttctacgaggacttgaagatttgaaatat
gataaaaaactgatgtggctgtggattatttctgaccataatcgagataactctacaaag
caactggaaacatgggtaagagttttcaatgatcaatacgcaaagattgagtttgagaaa
ccagatttcccaatgaattacaacggagatttgagtgacttacattggacaaaagatcga
tacattcgactgcttgagctgaagcaatttgcactaatcaaagcgagaaagatgaatgtc
gatttcattttatatattgatgctgataatattctaatgaatccatacactttgaaccac
ctcaccggaaaatcgcagacgatcattgcacctatgctgaattcaaatacggattactcc
aacttttggggcgaggtggacaaagaaggatgtcataaagataatgacttgtacgataaa
atcaggactcgtaaagaaaccgggacctttgatgttgcattagtacattcaacattcttg
ataaatttgaaaaatgaagattctaaaaaagttagatttttaccaattccatcatgttac
gaccacgattttaatgatgatatgatttttcattaccaatgtgatttggaagacgtacat
atgtacattgataattccgttttttatggttatttaccagagccacaagatggcttagaa
gatgaaatttataattttatgagaatgaggatggatgctatgacactgcctcctgtaggc
gttggaatatcgttaagaaaatctgtacacgttccggataaggagattattaccagtctt
ccagttgatcatgtgtttgtaattaatttggagagaaatcgcaatcgcagattacggatt
aataaaagctttgcaatgtataaaatcaattacacattatttgatgctgttgatggaaga
aaattaaatagaagttatatcgatagtcttggcatcaaagtacctacaggctataaaagc
ccggagtttggaaatgaaatgactgtaggtgaaattggttgctttttgagtcattatttc
gtttggaaaaagattttggatgagaaatacgaatcaaccatcatctttgaagacgatgtt
caattcaaaccaaaatttatccaaaaatttcagaatgttatggagaaagtacgaaatgag
aatatatcgtgggatttgatttatttggaaagaaaaccagcgggaaatgaaggcgaggaa
gaaacggtgatattacaaaatgacagtggtcctaacttggtgcaaccagtctattcctac
tggaccatagcgtacatgatatcttacgatggggcgaaaaagttgattgatgccgaaccg
ttgggtaaaattattgcagtggatgtgtttcttgctgtcatgtacggaaaacagccctta
aattatattaataaatatttcccaacaaaaaatctcaatgctctttcattcgagccaacc
atagtaaaacaaacacactactactccaatgattatcatgtcagcgataccgcaaattca
aaattcgccaatgaaatcctgcagtag
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