Styela clava (leathery sea squirt): 120331440
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Entry
120331440 CDS
T07291
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120331440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sclv04131
]
120331440
Membrane trafficking [BR:
sclv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120331440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_VPS8_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_WDR5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
zf_RING_Vps8
Beta-prop_THOC3
Beta-prop_HPS5
zf-RING_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
120331440
NCBI-ProteinID:
XP_039254456
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MDKLETSNGNILEDLEELDPTEFDIPDVEEPSLESILKEAESETEDNVSLLDNITNGFSP
ASTGTPEKNISNGYLKKSEMASLSVLKSLETTSIKSGDSQASSVKKKDAPQFHGPVLAFY
RMQALSNHIMSSADRINAGKPTSLAVSQLIAIGTAHGIALVFDNDQKLVHVLGSVSVGSK
YGSVTALAFNMDSDRLLVGYARGQILMYDVKSGKLLRTITDAHPPGSSVLHVKFTDDPTL
AVCNDSGGSVFELNFRRVMGVRSCESRCLFSGSRGEVCTIEPLHILKTIADHPLRDRHLL
AMGTLTKVLVVSLRPQIKVLFSHQLNRNMTNIPLISWRLSVFVESNTRSIDPVLLFARGD
VIYFFQVKNENWDNILFSHIRTMNTTYTLINVAWLNTKTILCLDSTERLHVVDEATQAEL
ETILLENVNLVYSSATFKSIATGGNVSKALAAIGEQTCYHSMISYNGTVLLLGDLCVYAT
KVRQWNDRIRTSLGWPNGHQRALELALTFYNGTAKSVLGLPVDQEKRRQLVSEMILDILI
EYVDLSMTKLCPDNGKLEVLIAFFKDVVPVCVDHCLHINRIDVLCDRIYERFKADCIAHT
VFLECLEPYILDDRLKTISPIVMQDFVKHYEAKNMLSNVEACLLHLDVASLDLHQVLSLC
WSHGLYDAILSINNRVMSDYVGPLVEMISMLTSAMAIGKQLSDNMTKLGSKLLVYVSSCF
AGVQYPSGMLDPESSMAVKKQIYGCLTTPKLNVFTEEYPVLAILLKFSTQEMLNVLSLSF
SEPEFQGQKGCGRVQQLVDILLRIMVETPGFTPDQIGTLFVFLARQVARRQDDQQLRVNR
MLIQQIVEYLTSPLSSQEESSKHEERQQALVELLQSEVIGNEEDSVHLMKLVERAGFYHA
LRLLYDRNRRFDLIFETYLKDPAKKEHAFRYIRDTLQDKTVDEGEKDLLVEKVSQNIKEL
IKIDSDQTANLVTTVLHGSLQTVAAKLKDQPQMLYFFLKGLFNPSTSHFHDADNASLNGD
LSIEPEGPNPYTSDPEMVQVYLSLMCQFDRNKVLQFLKSLESNRPSNSIEIVRRYHVDEA
TAYLLEENDDCSAAFMILHKVAKDKLQKFVERCENDIENSVSLDTEKLMAESKSIFESVI
GLCQRSSSKLSEEQMEKLWFPLLDTVVSPRREITSDTTITLGNSNSELEKILKELAQHVL
TSMMSHMSLPALLQKIIQDPAYDTGNFGEIKEILLGMLETYQYEKTLLDTTLNLLSRDRH
ESLSSLKKFVVHGIAPRSQYCAACRESILGFGTGDKGDSNIVIFGSGTVYHESCLKFDPA
ISPVVQNQPPSPYESPGRSRRSSNQTSLMNAMKPQEKRVVKERRNYVDRKRQINNVSKIF
LSAKGGKESSQTQGQRIFRREGSLFAVPVPQNSRNDSSKVDDAKTYSSKIRTLSLKSGEL
QPQDFKLSVAAPARFF
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcttgaaactagtaatgggaatattcttgaagatttagaagagcttgatcca
acagagtttgacattcctgatgttgaagaaccttccttagaaagtattttgaaagaggct
gaaagtgagactgaagataatgtgtcgttgttggataatatcaccaatggtttttcgccc
gcatctacaggaactccagagaaaaacatatcaaatggttatcttaagaaaagtgagatg
gcatccctgagtgttctgaaatcattagaaacaacatcaatcaaaagtggagacagtcaa
gcttcaagtgtaaagaaaaaagatgctccacaattccatggacctgttcttgcattttac
cgaatgcaagctctgtcaaatcatatcatgtcatctgctgatagaatcaatgctggaaag
ccaacatcattggcagtttctcagttgatagccattggaactgctcatggaattgcttta
gtatttgataatgatcagaagttagttcatgttttgggtagcgtcagtgttggtagcaag
tatggttctgtgactgcattggcattcaatatggatagtgatagactactagtcggatat
gcaagaggacagattctcatgtacgatgtaaaatcagggaaattactccgaacaataaca
gatgctcatcccccaggatcttctgttttacacgttaagtttactgacgatcctacatta
gcagtttgtaatgacagtggtggatcagtgtttgaattgaatttcaggagggttatgggt
gtgaggtcttgtgagtcaaggtgtttgttttctggcagtcgaggtgaagtatgcaccatc
gaacctctccatattctaaaaacaattgctgatcatccattgagagacagacatttgttg
gcaatgggaactttgacaaaggttcttgttgtgtcattgaggccccaaatcaaagttctt
ttcagccatcaactgaatagaaatatgacaaacatacctcttatcagttggcgattgtct
gttttcgttgaatctaacacaaggtctattgatccggtgttattatttgcaaggggagat
gtcatttactttttccaggtgaaaaatgaaaattgggacaatatactattttctcacatc
aggactatgaacacaacttatactctcattaacgttgcatggttgaatacgaagaccatt
ttgtgtctcgactcaacagagagattgcatgttgtggatgaagcaacacaagctgaactt
gaaacaattttattggaaaacgtcaacttggtatacagcagtgctaccttcaaatcgatc
gctacaggaggaaatgtcagcaaggcactggctgctattggtgaacagacatgttatcat
tcaatgatttcttataacggtacagtattactgctgggtgacttgtgcgtgtatgcaacc
aaagttcgacaatggaacgatagaattcgtacatcactcggttggccaaatggacatcag
agagctttggaacttgcattgacgttttataatggaactgccaaatctgttctaggtcta
cctgtagatcaagaaaaaagaagacaacttgtctccgaaatgattcttgatatcttaatt
gaatatgtggatctttcaatgacaaaactatgtcctgataatggaaagttagaggtattg
attgcctttttcaaggatgttgttccagtttgtgttgatcattgtcttcatattaacaga
attgatgttttgtgtgacagaatatatgaaaggttcaaggcagactgcattgctcacact
gtgtttcttgaatgtctcgaaccatatattcttgatgatcgactaaaaactatcagtccg
atagtaatgcaagatttcgtgaaacattacgaagcaaaaaatatgttatcaaatgttgaa
gcttgtcttttacatctggatgtagcaagtttagatctacatcaggttctaagtctttgt
tggtcccatggactttatgatgcaatactaagtataaacaacagagttatgtctgactat
gttggtcctcttgtcgaaatgataagtatgttaacaagtgcaatggcaattggaaagcaa
ttgagcgataacatgacaaaactagggagcaaactattggtttatgtaagtagttgtttt
gctggtgtgcaatatccaagtggaatgctggatccagaatcatcaatggctgtcaaaaag
cagatatatggatgcctgacaacaccaaaactaaacgttttcacagaagaatatccagtt
cttgctatcttgttgaaattttctactcaagaaatgctgaatgttctttctttgtccttt
tctgagcctgagtttcaaggtcaaaaaggatgtggcagagttcaacaacttgttgatata
ttgctgagaataatggtggaaacacctgggtttactcctgatcaaattggaactcttttc
gtttttcttgcgagacaagttgcaagacgtcaggatgatcagcaattgagagtaaacaga
atgttgatacaacaaattgttgaatatttaacatctcctttgtcatcacaagaagaaagt
tccaaacatgaagaaagacagcaagctcttgtcgagttgttacagagtgaagttattgga
aatgaagaagacagtgttcacttaatgaaattagtagaaagagctggtttctatcatgca
ctaagattattgtatgataggaatcgaaggttcgacctaatttttgaaacttacctcaaa
gaccctgcaaaaaaggaacatgcatttcgatacatccgagatacattacaagataaaact
gtcgatgaaggagaaaaagatttattagtggaaaaagtttcacaaaatataaaggaattg
atcaaaatcgacagtgatcaaactgcaaatcttgtaacaacagtacttcatggatcacta
caaactgtcgcggctaaattgaaggatcaacctcagatgctttatttcttcttgaaagga
ctttttaatccttcaacatcacattttcatgatgccgataatgcaagtttaaacggtgat
ttatctatagagccagaaggtccaaatccttatacatctgaccctgaaatggttcaagtt
tatctttctctcatgtgccaattcgatagaaacaaagttctgcaatttttgaaatctttg
gaatcgaaccgaccttctaattctatagagattgttcgaagatatcatgttgatgaagcg
actgcatatttacttgaagaaaatgatgattgttctgcagcgttcatgattcttcacaaa
gttgcaaaagataaattacaaaaatttgtcgaaagatgtgaaaacgatattgaaaactcc
gtcagccttgatacagaaaaactgatggctgaatcaaaatcaatatttgaaagtgttatt
ggattatgtcaaagaagttcatctaaactttcagaagaacaaatggagaaactctggttc
ccgttactggataccgtagtaagtcctcgtcgtgaaattacttctgatacaacaatcact
cttgggaattcaaattcagaattggaaaagattttgaaagagttagctcagcatgtactc
accagtatgatgagccatatgtcattgccagctcttttgcaaaagattatacaggaccct
gcctatgacactggaaattttggtgaaatcaaagaaattcttcttggaatgttggaaact
tatcaatacgaaaaaactttacttgatacaactttgaatttgttatctcgtgatcgacat
gaatctctctcttcattgaagaaatttgttgttcatggaattgctccaagatctcaatat
tgtgctgcatgtcgggaaagtatacttggatttggtacaggagataaaggagacagcaat
attgtcatttttgggtctggtacagtttaccatgaatcctgtcttaaattcgatcctgca
atatcgccagttgttcaaaatcagccacccagtccatatgaatctcctggaagaagcaga
cgctcatcaaaccaaacatctttgatgaatgcaatgaaaccccaggaaaaacgagtcgtc
aaagaacgccgcaattacgtcgatcgcaaaagacaaattaataacgtttctaagattttc
ttgagtgctaaaggtggaaaagaaagcagtcaaactcaagggcaaagaatattccgaagg
gaaggctcattgtttgctgttcctgtgccacagaattcaaggaatgacagtagtaaggtg
gatgatgcaaagacatattcttcaaaaatacgaacactttctttaaaatctggggaactt
caaccacaagattttaaattatctgtagcagctcctgcaagatttttctga
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integrated database retrieval system
