KEGG   Styela clava (leathery sea squirt): 120331441
Entry
120331441         CDS       T07291                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120331441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sclv03041]
    120331441
   04121 Ubiquitin system [BR:sclv04121]
    120331441
Spliceosome [BR:sclv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    120331441
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    120331441
Ubiquitin system [BR:sclv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120331441
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 120331441
NCBI-ProteinID: XP_039254458
LinkDB
Position
Unknown
AA seq 782 aa
MGSSKKHRKDHKHRKHKRSSPAYDDEERDESHSPEEKKRRRHDDVETEKSYSKQKKHKKK
HKKQSERDRDSESPQKLESERNGKSRQHHAEPTPTSANGEGDSLSIEETNKLRLKLGLKP
LDVGGSSGNATESKKEEFVHAPAEDLWEKKKQDDIREKLRAIKEKRNLNKKMGKIKTLGE
ENEDENDAVSWVERSRKMEKQKKVAEKREQEMAKMDAEFGIGGLIDNEFADVKKDSYTSR
DLQGITVKHSLEMFKEGRSEILTLEDKNILEEDKDDVLVGVNLVDTEKAKRNLDVKSKGS
GYKAYDEEEVDEMGFFKQKSMLSKYDEEIEGIKQEKFTIGNYGKVDTTWEQQKMMMKNEI
KAKGVSLALPQLKIASEYLTEEEMTKFKKRKKKVRKVRKRDLKPDDLQPLPGSSTSSDFG
SRSRNQRGNIPGWDEGIESAKVDDTSITSTTLMNSTKNVIFDEDDASNELQKALDKARRA
KQVKSNMVTEDVGASKVVEHLDLLNKVSFENPMANYSTTISLNSTDEFCRQLGTASDLNV
IKEVPMEETSMDDSVDMDVEDEEEEEEVTSGWNFVNDKAKVKPVTQAEPVDDRHAPIEAE
PLAVGGLAGALKLATRKGYLMEEKPKGSVTITSKNIDLLSANYSIEDKNAVDHLDKYAHE
KYSKDRSNRYDRGIVMDFEEKKNYKPKVTIEYVDEGGRLMNPKEAFRKLSHRFHGKGSGK
MKLEKRQKKKGEEDMMLKMSSTDTPLNTVAMMKEKLQSEASPYIVLSGAGKTLQAGGGGL
KK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgggatcatctaaaaagcataggaaagaccataaacatcgaaagcacaagcgttcaagt
cctgcatatgatgatgaagagagagatgagagccatagtccagaagaaaagaaaagaaga
cgacatgacgatgtagaaacagaaaaatcatattctaaacaaaaaaaacataagaaaaaa
cacaagaaacaaagtgaacgagatcgagattctgaatccccccaaaagttggaatctgaa
cgtaatggtaagtcaagacaacatcatgctgaacccactccaacatcagctaatggcgaa
ggtgactcactcagtattgaagaaacaaataagttgaggttaaaactgggactcaaacct
ctcgacgtcggtggatcttccggtaatgcaaccgaatcaaagaaagaagaatttgttcat
gctcctgctgaagatttgtgggaaaagaaaaaacaggatgatatcagagaaaaactacga
gccattaaagaaaaaagaaacttaaacaaaaaaatggggaaaatcaagactttgggagaa
gaaaatgaagatgaaaatgatgctgtgtcttgggtagaaagaagtagaaaaatggaaaaa
caaaaaaaggtggcggaaaaacgagaacaagaaatggctaaaatggatgcagaatttggt
attggtggtttaatagacaatgaatttgccgatgtaaagaaagactcatacacatctcgt
gatttgcaaggcattactgtaaaacattccttagaaatgtttaaagaaggaagatcagaa
attttaactctcgaagataaaaatatacttgaagaagataaggatgatgttcttgttggt
gtaaacttggttgatactgaaaaagcaaaacgaaatttggacgtgaagtccaaaggttct
ggatacaaagcttatgatgaggaagaggttgatgaaatgggattttttaaacaaaagtct
atgctctcgaaatatgatgaagaaattgaaggaattaagcaagagaaatttactatcggt
aattatggaaaagttgatacgacttgggaacaacaaaaaatgatgatgaaaaatgaaatt
aaagctaaaggagtcagcttagcgctccctcaactcaaaattgcatctgaatatttgact
gaagaggaaatgacaaagtttaaaaaacgaaaaaagaaagtgcgaaaagtaagaaaacgt
gatctaaaaccagatgatctacaacctctaccgggtagttcaacatcatctgattttggt
tctagaagtcgaaatcaacgaggaaatatacctggatgggatgaaggtattgaatctgca
aaagtggatgacacaagtataacatctacaactttaatgaattcgacgaaaaatgtcatt
tttgacgaggatgatgccagtaatgaacttcaaaaagcattggacaaagcaagacgggca
aaacaggttaaatcaaacatggttactgaggatgtcggtgccagtaaagtcgtcgaacat
ttagaccttttaaataaagtttcatttgaaaatccaatggccaattattctacaactata
tctttgaattcaactgatgaattttgtcgtcagctcggaactgcctcagatttgaatgtt
attaaagaagtgcctatggaagagacttccatggacgacagcgttgatatggacgtggaa
gatgaagaagaagaagaagaagttacgtcaggatggaattttgtgaacgataaagccaaa
gttaagccagttacacaggcagaacctgtcgacgatagacatgcacctattgaagccgag
cctcttgccgtaggcggcttagccggtgcactaaaacttgccacacgaaagggttacctg
atggaagaaaaaccaaaaggctcagtcacaataactagtaaaaatattgacctgctttct
gcaaactattccattgaagacaaaaatgcagttgatcatttggataaatacgctcacgaa
aaatactcgaaagaccgtagtaatcgctacgatcgtggaattgtaatggattttgaagaa
aagaaaaattataaacctaaagtaactatcgagtatgttgatgaaggaggtcgattaatg
aatccaaaagaagctttcagaaaattatctcacagattccacggtaaaggatcgggtaaa
atgaaactcgaaaaacgacaaaaaaagaaaggagaagaagatatgatgttgaaaatgagt
tcgactgatacaccacttaacacagtagcaatgatgaaagaaaaattacaaagcgaagca
agtccttatattgttctaagtggagctggtaaaacattgcaagctggtggtggagggctg
aagaaatga

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