Styela clava (leathery sea squirt): 120331450
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Entry
120331450 CDS
T07291
Name
(RefSeq) nibrin-like
KO
K10867
nibrin
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120331450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sclv03032
]
120331450
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120331450
DNA replication proteins [BR:
sclv03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
120331450
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
120331450
BRCA1-C complex
120331450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
BRCT
PTCB-BRCT
RTT107_BRCT_5
Nbs1_C
Yop-YscD_cpl
Amidase_6
Motif
Other DBs
NCBI-GeneID:
120331450
NCBI-ProteinID:
XP_039254468
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MWCLVTSSDSSQYLLPCNKDIIVGRKDADIVITGDSSVSRKHGMLRITHPPSNLKNPEAI
PTITVTDSSKFGTFITRPGTEKIKVNKTAILNPGDFIQFGAQQSIFELQHIPLVVTSSSL
ENDVKQRLKASILQIGGHFVDSWHHGVTHIVVEKIKLSIKVTQALVYGCHIVEPNYIWKI
SELLSKTKVTLPSAEQYLPELGEPNLSAEFCSFKVNKQRRSVFSGRTFIYLCKKQLKRLE
HTVLGGGGKNVLLNDSSVDDDFLSSSSTSVVHCDINTDSIIASNAEYEHIQDVLIENEQR
FIQEHEIGLAVLYCDAAVYCNPSFDLNSQNTFTQARMAETEPNATESRPFQSDESSIDTV
ERKRLRSVDNEATTSEKVSPEDNNLAKKFKVDDAPINIDRPFAQENDIISDNISHSCLDD
DNLWSQNLDSASFRPDKSVLDDEEISKRNKINTEIELSKFESVQNLPVHGEKPQKQSDSV
QPDINENRNTYSSVTEIHSLEVNMDKQSHKSLHSDQMKPDNHIQKMIKKEPNLTEHPPPN
NKITSSGYDPSFPTNLSITDIVPLIVKKKLKVTDENLPIIGVKNFKTFRKIWPTYMIKKV
PDRQKVTESSPRFPSRIIGGSDFFVNESRNDRSNDIGKWLGCESQNFDPFNKTPRV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtttagtcacatcctctgatagttcccaatatcttctgccatgtaacaaagac
attattgttggtcgaaaagatgctgacatagttataacaggggactcgtctgtaagtcga
aagcatggtatgcttaggattacacatcctccatcaaatttaaaaaacccagaagccatt
ccaacaatcactgtcacagactcttcaaagtttggaacttttatcacacgacctgggact
gaaaaaataaaagtgaacaaaactgcgatactaaaccctggagacttcattcaatttggt
gcgcagcaaagtatctttgagttgcaacacattccccttgtggtaacttcctcttcactt
gagaatgatgtgaaacagagactgaaagcctcaatattgcaaataggtggacactttgtg
gatagctggcatcatggggttacccacatagttgtggaaaagatcaaattgagcatcaaa
gtcactcaagcattggtatatgggtgccacattgttgaacccaattatatttggaaaata
tcagaattgttgagtaaaactaaagttactcttccatctgctgagcaatacttgccagaa
ctgggtgaacccaatctatctgcagaattttgctccttcaaagtgaataaacaaagaaga
agtgtttttagtggccgtacttttatttatctctgtaaaaagcagctcaaacgcttagaa
catacggtacttggtggtggaggtaaaaatgtactcttaaatgactcatcagttgatgat
gatttcctctcaagttcatcgacatcagttgtacactgcgatataaatactgatagcata
attgcaagcaatgctgaatatgaacatattcaggatgtattgattgaaaatgagcagaga
ttcatacaggaacatgaaattggtcttgctgttctttattgtgatgctgctgtgtattgc
aatccttcatttgatctcaactcacaaaacacgtttactcaagcacgtatggcagaaaca
gaaccaaacgctactgaaagtcggccctttcaatcagatgaatccagcattgatacagtt
gaaagaaaaaggctaaggagtgttgacaatgaggcaacaacatccgaaaaagtatcacca
gaggacaacaatttggcaaagaaattcaaagtcgatgatgctccaataaatattgataga
cctttcgcccaagaaaacgacatcatttcagataatatttcacatagttgcctggatgac
gacaatttatggagtcagaatttggacagtgcttcttttcgaccagataaatcagtttta
gacgatgaagaaattagtaaaagaaataaaattaatactgaaattgagttgagtaaattt
gaatctgttcaaaatttgcctgtccatggtgaaaaacctcaaaaacagtcagactctgtc
caaccagacatcaacgaaaaccgtaatacctactcatcagtcacagagattcattcactt
gaagtaaatatggataaacaatctcacaaatcattacattcggaccaaatgaaacctgac
aatcatattcagaagatgataaagaaggagccaaatttaacagaacaccctcctcctaac
aataaaataaccagcagtgggtatgatccatcttttccaactaacttatccatcacagat
atagttcctctaattgtcaaaaagaaactgaaagttactgatgaaaatttgccaattatt
ggtgtaaaaaatttcaagacatttaggaagatatggccaacttacatgatcaaaaaagtg
cccgatagacagaaggttacagaatcaagtcctagatttccatctcgtataattggggga
agtgatttttttgtcaatgaaagcaggaatgatagatctaatgatattggaaaatggctt
ggttgtgaatcacaaaattttgacccattcaacaaaacaccaagggtatga
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