Styela clava (leathery sea squirt): 120331480
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Entry
120331480 CDS
T07291
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120331480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120331480
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120331480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
bHLH_IRO3
PAS_2
bHLH_NCOA
HAUS2
HisG_C
Motif
Other DBs
NCBI-GeneID:
120331480
NCBI-ProteinID:
XP_039254498
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MDPGKDQNMDDMSQADKERFARENHSEIERRRRNKMTAYITELSDMVPSCSALARKPDKL
TILRMAVSHMKQLRVGMAGGGLDSAYKPAFLTDQELKHLVLESADGFLFVASCETGQVIY
VSDTVTSVLSQAHSDWLGHSLYDLIHPQDVAKVQEQLNLNDTQNTGRMLDLKTGTVKKEG
QQSSVRMCNGSRRAFICRMRCGKVQVNTNGPRYQRARNTLGHTGDGEDMHTVTHVTGYIK
PWPPSGYTGADAQPDVLEDMAGQNSNGNTDYCLVAIARLQITSHPTFGDLNPTSDATEFV
SRHNFDNVYTFVDMRVTSILGYQPQDLLGKRPVDFYHPDDAEQAQESFKQVMLLRGQVFS
MVYRFRAQNGEYIWMRTSTFTFQNPYNNEVEYIVCTNSLMKQNQSQQQSAPTSLQEDQVQ
DQKGMPGGYGHVRSDQQYGNKPTQSPDVQSPTTTLNYPPQNIATASAQIPSQFSPTTVPI
AQPGWNPVGVGAADPVSSQYSQALLDRYQAPVAPQQQHGGMYTNASYQASPPIGGYVADG
RPTEAYPQSETMMSMLEQGPNAYNQEEFTELNMFTPFSQS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggaaaagatcaaaatatggatgatatgtcacaagctgacaaagagcggttt
gcaagagaaaatcattcagaaattgaaagacgtaggcgcaataaaatgaccgcatatatc
actgaactatcggacatggtacctagttgtagtgcattggcaagaaaaccagacaaactg
actatacttcgcatggcagtttctcatatgaagcagttgagggtgggaatggctggtggt
ggactggatagcgcatacaaaccagcatttttaaccgaccaagaattgaagcatctggtc
cttgagtctgcagatggctttctctttgttgcatcttgcgaaactggccaagtaatctat
gtgtctgatacggttacatcagttctcagtcaagctcattctgattggcttggccacagt
ttgtatgatctaattcatccacaggatgttgccaaagtgcaagagcaattgaatctcaac
gatacacagaataccggccgtatgcttgacttgaaaactggtactgtcaaaaaggaggga
caacaaagttcagtacgaatgtgcaacggatctcgtcgtgctttcatttgtcgcatgaga
tgtggcaaagtacaagttaataccaatggtccaagatatcagcgtgccagaaatactctc
ggccatactggcgatggtgaagatatgcatacagttacgcatgttactggttatataaaa
ccttggcctccatctggatatactggagccgatgcacagccagatgtgttggaagatatg
gctggtcagaactccaacggcaatacagactattgtctggttgcaattgcaagacttcag
ataacaagtcaccccacgttcggagatctcaatcctacaagcgatgcaactgaatttgtt
tcccgacacaattttgacaatgtatatacgtttgttgatatgcgagtgacaagcatactt
ggatatcaaccacaagacttgctcggaaagaggcctgtagatttctaccatcccgacgat
gcagaacaagctcaagaaagtttcaaacaggtgatgctgttacgtggacaggtattttca
atggtatatagattcagggctcaaaatggtgaatatatttggatgcgcaccagtacgttt
actttccaaaatccttacaacaatgaagttgagtatattgtctgtacgaattcgctaatg
aaacaaaatcagtcgcaacaacaaagcgctccaacttcactacaagaggaccaagttcag
gaccaaaaaggaatgccaggtggatatggacatgtaaggagtgatcagcaatatggaaac
aagcctacccaatctccagatgttcaatcacctacaacaactctcaattatccaccacaa
aatattgcaactgcttcagcacaaattccaagtcagtttagtcccacgactgtaccgata
gctcagccaggttggaatcccgtaggagtcggcgcagcggatcccgtcagttctcagtat
tctcaagcacttttggatcgataccaagcgccagttgcccctcaacaacaacatgggggg
atgtatacaaatgcatcatatcaagcatcacccccaattggtgggtatgttgcagatggt
cggccaacagaagcatatccacagtccgagaccatgatgtctatgctggaacaaggacca
aatgcttataaccaagaagaattcacagagttgaatatgttcacacctttctcgcaatcg
tag
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integrated database retrieval system
