Styela clava (leathery sea squirt): 120331612
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Entry
120331612 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like
KO
K10653
tripartite motif-containing protein 54
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120331612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120331612
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120331612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-B_box
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
Tox-ODYAM1
Prot_inhib_II
Sina_RING
PAH_ZNF598
T4_Rnl2_C
Zn_ribbon_FGT1_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
120331612
NCBI-ProteinID:
XP_039254644
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MEALRMLSKGPGVDYEAEVERLLSCPICLEVYSKPVVILPCQHNLCRKCANDVFQNRGTP
MGSGGRFRCPTCRYEVMLDRHGVYGLQRNLLVENIIDMYQSESKKPFRKVEVLMCEEHEE
EKLNIFCVTCQKPTCSMCKVFGQHQECTVFPVEKVYKDHKSEVSGAIAMLVAGNDRLQTI
ISKTEELTVKTEENSKTVQSDVCASFDKLYAVLEQRKQAMLSKVKALTQEKTEILQSMLK
QYGSQLESSSKLVEEALSLLEEPNAAQFLSVSRDLINRVTSTAKATDVRKPPADIHQMGM
FAVDFSNHAKYLSRINFPARGEDEEIGSEDYETTSDHASCDSEVTSSAASTTHSGDVFQA
KLLLPKADDAEEVVAAARVTRTDDDDVLSVTSRSDYTGSDRRESNVSFDDDKQLDQLDDE
VKAIAEKYLSGRASRARSQASTKSDSSAEARRRSYSEEESLWKNW
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttacgaatgctgtcgaaaggtccgggagtagattatgaagccgaagttgaa
aggcttctgagttgcccaatttgtcttgaagtttatagcaaacccgtcgttatcctacca
tgtcagcacaatctctgtagaaaatgtgcaaatgatgtttttcaaaacagagggacaccg
atgggatctggcggtcgatttagatgcccaacctgcagatatgaagttatgttggacaga
catggagtttatggattgcagcgcaatttacttgttgaaaatattatcgatatgtatcag
tcagaaagcaaaaagccattccgtaaagtcgaggttctcatgtgcgaagagcacgaggag
gagaaactgaacattttctgtgtgacgtgtcaaaaaccaacttgttctatgtgtaaagta
tttggacagcatcaagaatgcacagtcttccctgttgaaaaagtgtacaaagatcataag
tctgaagtcagtggagcgattgcgatgttggtggctggaaatgatcgtcttcaaacaata
atttccaaaacagaagaactgactgttaagacagaggaaaacagcaaaaccgtacaaagt
gatgtatgtgcatcttttgataagctttatgctgttctcgaacaaaggaaacaagctatg
ttaagcaaagtcaaagcattaacacaggaaaaaacagagattttgcaaagtatgctgaaa
caatacggcagtcaactcgaatcttcaagtaaacttgtcgaagaagctttgtcgttgttg
gaagaacctaacgctgctcaatttttatcagtcagtcgtgatttaatcaacagagtgact
tcgacagcaaaagccactgacgtgaggaaaccacctgcggacatacaccagatgggaatg
tttgcggtagatttttcaaaccatgcaaaatatttatcgcgtatcaattttccagctaga
ggagaggatgaagaaattggatcagaagattatgagacaaccagtgaccatgcgtcgtgt
gattcagaagttacgtcgtccgctgcgtcaaccactcactctggagatgtttttcaagca
aaacttctacttcctaaagcagacgacgctgaagaagtcgttgcagctgccagagttaca
cgcacggatgacgatgacgttttatcagtgacatcacgaagcgattataccggttcggat
cgaagggaatcaaatgtatcttttgatgatgataaacaattagaccaattggatgatgaa
gtaaaagctattgcagaaaagtatctttcaggacgtgcatccagagctagatcgcaagct
tcgacaaaatcggattcttccgctgaagcgagacgacgtagctacagcgaagaggaatcc
ttgtggaaaaactggtga
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