Styela clava (leathery sea squirt): 120331661
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Entry
120331661 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 2-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120331661
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120331661
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
U-box type E3
120331661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
U-box
zf-CCHC
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120331661
NCBI-ProteinID:
XP_039254719
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MSAIHYKFSSSNDYKNVTFDGINISLQDCKKAIMLKEKLKMTEVDLLITNAQSLQDYKDE
SALIPKNTALLVRRIPLGAVPDKTKVYVVKKNETAASSKSDSHYMSLEELRKTEDLVSAN
ASEQDKIKAMMDQSTNEYDPSKYLRPPKYGSYQRYNDHSSLTSYVKCYKCNQSGHYASQC
RIKPAAERPKPFRPATGIPRSHMIQVNKETRGAMLTADGQYVVPVIDKKGYDVGKKEKPP
FLPEVVNEKEDDEDEPVPDELICLLCKEIMHDAVVIPCCGNSYCDECIRNALLESDDHEC
PTCHRKNISPDSLIANKFLRQAVNKFRNETGISRKKNAPVWPRPAAVETKPVPTPQPTKV
VAYGPPKAKIQYGQSKPSTGGAYVVKARTGQVYNAMGYSVKKAPANMMQPSTPVVTTAAT
TMPVKSETETPEDVVKQEQVDVTNSPATPDQPHTTNVTPQSDGYTVNSTPDSEERPEDTT
VVQPLPPGVSPESIVPQRSAVRTLEIQDDLSIVNSSRFKFTEKRRKSCPYSTRVASPATV
AGITPLMSVKTERPKINAVNMMIERPHEDSPPPPPPLPPPTSRQPEIDPALIENMKHLPP
PSIPVSEQQPVPEPPVPRPPPSLLDDMPPMETAKLPIPSSQGINITLRNAPSVELRPELN
PAILDPPLNMPPPKRPGQQLALPPMIQGPPGSFPPRIPGPMTLPPPGMPPMSLAMSVPPP
AGPLGGHLHRMLPPPVLRTSGPPPNVPTSIPPPGMTRPPGNMSIPPPMLPPGVRLPFPPP
PGVPPPGIPPPGFVKQSPLGQAGIDSQGLPPPPGTGTPPSIPTSVAPNNRSRERHRGSSR
SKHHVREERSSKSRKSKLAMMSDEFTKDLQKQRDKVPRKRRTRRGRSESRSRSGSYSSST
SYTSSSSRSSSRSSYSSTASSSYSSSGSYTDSRSRSRTPTRRHQRRTKQRRGKKSESRSY
SRTPSRSPTPDKKKRGRKQAVKHRKSSRSPGKRGSGSRRRNHSRSRSTSQSSQRHVPSSR
HRSDRERRRRSRSKSQSKDSHKTDGRVQNESEAVIPGMPPQSVLDYERDIALYDYYKQKY
EQDWLRSRVLPPSPFKRFINYDPTKFPPPVVHSQPQPVLREIAPHSSLIPIQQAPPLMMY
QRQPPPPGDATPTEEDAGMLVYRDRTPERYHVRPGPPAPWDPPAFEGDLAERERLLREEE
YYRRMQGQLVRQEPWPPNHRGPPGPAHHFDPNAPRARMDPRAGDRGRYHDERRRRGRTPP
MERGGRDRDGRPYDREDERYSRRRRPEIEETARSGSQRGSRDRDRDRERTSDTSKRSSNA
RKEGRSSRRDEASSRSSRKEEETRSRKRTRDHDKQQEKKPVIVILEVKKEAEEARELKHQ
GDRNIEPVPPGEGDGTPVRDEALVEFRNESIKIKVFNDKAKPRSEKSRNRDKGFSRDQED
GKHRRKRDERIISDKRDSQRQRRPREQKISGGERKMTATNREEGDKRTQSPLPGVEDRTP
ETKTTSEPAIERSPTPTLDENISPVLIEGADDPVLDDLMETTTPQPELMPESVDNASNEN
PELTENENKSHAMNEIPEIIQEKLEEELPQQPERKKSKRVKGSRNVSKTKHRKKPSPRES
NKQKDEERSQVVEYDGSGPTPTGDELVQITIPKSKWESDDESGSQRNDKVKALTKVSPKP
DKKNAKSRKIRLKKPGKSSNTEAIKEDKQKNNNQDEENENLKKNSASTVQSKKSTPSPAI
SDSRRVVVSNEPSADIHSSSKQSRLLRPSISNIDEASFEPDYSGNESEKALSNYAPSDID
ASDHEENKKAPREKRLSTSITEEPNPRRKETSSKRGKHSSEVSRKAKEEKYEDEFADSLP
EGSEGDYEKMKKKRKHKKKKKHKKHHRQQSQDTEDDISIRDDYDDENLFQTDSDEEKFER
MRQEEERRKIETAQRQVIYQDERYSSRRENGKSKKEQRSVERSERDQRRHHKHEDKQVSD
RKRRYEDIDEYFSEEEDRRSKKKYQGSSETMKRKDKRRRVSDRSERYYAEDDYMNEDEYY
QSPEPEERRKHKPKKQKFKKTKKEPLKEVRTVASRIQRSR
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgatccactataagttctcaagcagcaatgattacaagaatgttacgttcgat
ggaatcaacatttcactccaagattgtaagaaagcaataatgttaaaagaaaaattgaag
atgacggaagttgatttgctaattacgaatgctcagtccttacaagattataaagatgag
tcagcgttgataccaaagaacactgcattgctcgttagaagaattccattaggtgctgta
cctgacaaaacaaaggtttatgttgtgaagaagaatgagactgctgcatcttctaaatcc
gattcacactacatgtctcttgaagaattacgaaagacagaggacctggtatctgcaaat
gcatcagaacaagacaaaatcaaggctatgatggatcagtcaactaatgaatatgaccca
tcaaaatatttgagaccacctaagtatggaagttatcaacgatataatgatcattcttct
ctcacctcgtatgtgaaatgctacaaatgtaatcaatctggccattatgctagtcaatgt
cggataaaaccggcagccgaacgacctaagccatttcgtcctgccactggaataccaaga
agtcacatgattcaggttaacaaggagacaaggggtgctatgttgacagcggatggtcaa
tatgtggttcctgttattgacaagaaagggtacgatgttggcaagaaagagaaaccccca
tttttacccgaggttgtgaatgaaaaagaagatgatgaagatgaaccagtacctgatgaa
ttaatttgtcttctgtgtaaagaaataatgcatgatgctgtggtgataccatgttgtggc
aacagctattgtgatgaatgtattcggaatgcattattggaatctgatgatcatgaatgt
ccaacctgccataggaagaatatatcaccggactctttgattgcaaataaatttctaaga
caggctgttaacaaattcagaaatgagactggcatatcgagaaagaaaaatgctcctgtt
tggccaagacctgccgctgtcgagacaaagcctgttcccacgcctcaaccaaccaaggtg
gtggcatatggtccaccaaaagcaaagatacaatatggccagtcaaagccatcaacgggg
ggagcttatgttgtgaaagctcgcactggtcaggtgtacaatgcaatgggatattctgtt
aaaaaagcaccagcaaatatgatgcaaccatctaccccagttgtaactactgccgctact
actatgcctgttaagtcagaaacagaaactcctgaagatgtagtgaaacaggagcaagta
gatgttacaaattccccagctactccagaccaaccgcatacaacgaatgtgacacctcaa
agtgatgggtatactgtgaattcgactcctgattctgaagaaaggcccgaagatacaaca
gttgttcagcctttaccaccaggtgtatcaccagagtctattgtaccgcaacgcagtgca
gttagaacattggaaattcaagatgatttgagtattgtgaacagttcaaggttcaagttc
acagagaaaagacggaaaagttgcccttatagtacaagagtagcatcacctgctactgtt
gcaggaattacacccttgatgtcagtcaaaacagagcggccgaagattaatgcagtgaac
atgatgattgagcgaccgcatgaggattctccacctcctccgccaccactgccacctcct
acatctagacaacctgagattgatccagctctcatagagaacatgaagcatctaccacca
ccgtctatacctgtttcagaacaacaaccagtaccagaaccccctgttcctcgcccccca
ccttctttgttagatgatatgcctcctatggaaactgccaaacttcctataccttcatca
caaggtattaatattacccttagaaatgccccatctgtggaattgagacctgaattaaat
cctgctatactggatccgcctttaaacatgccccctccaaaacgtcctggacagcagctt
gccctgccgcctatgattcaaggacctccaggcagctttccaccacgtatacctggaccc
atgacactcccaccacctggtatgccacccatgtctttggcaatgagtgtaccgccacct
gctggccctttgggtggtcatttgcatcgtatgcttcctcctcctgtgctacgtacttcc
ggtccaccgcccaatgttcctacttcgattccgcctcctggcatgacaagacctccagga
aacatgtcgattccgccccctatgttaccaccgggtgttcgattgccttttccacctcca
cctggagttcctccaccaggcatcccacccccaggttttgttaaacaatctcctcttgga
caagcagggatagatagccaaggattaccaccaccgcctggcactggcacgccaccgtct
atacctacttcagttgcaccaaataaccgttctagagaaagacatcgtgggtcttctcga
tcgaaacatcatgtgagagaagaaagatcatcaaaatctagaaaatccaagcttgctatg
atgtctgatgaatttactaaagatttacaaaagcaaagagataaagttccgaggaagcgt
cgaaccaggcgagggagatcagaatccaggtcaagatcaggaagctattcatcatcaaca
tcctacacttcatcatcatcaagatcttcatccagatctagttattcatcaactgcttct
tcgtcttattcatcttctggatcttacactgattcaagaagtcgatcacgcacaccgaca
cgtcgacatcaaagacgaacgaaacaaagaagaggcaaaaaatcagaatcacgttcgtac
tcaagaactccaagccgatccccaacccctgataaaaagaagagaggcagaaaacaggct
gtaaaacatcgcaaatcttcaaggtcgcctggaaaacgaggcagtggatctaggcgtaga
aaccattcaagatcccgttctaccagtcagtcttcacagcgtcatgtaccatccagcaga
cacagaagcgatcgagagaggcgcagaagatctcgttctaaatcacagagtaaagacagt
cacaaaactgacggaagagttcagaatgagtctgaggcagttataccaggaatgccacct
cagtcggtacttgactatgaaagagatattgctctgtatgattattacaagcagaagtat
gaacaagactggttgagaagtagagttcttccaccatcaccattcaaacgattcatcaac
tatgatccaacaaaatttccaccacctgttgttcactctcagcctcaacctgttttacgt
gagattgctcctcactcgagtcttattccaatccaacaagctcctccactcatgatgtac
cagcgacaaccaccccctcctggtgatgcaacccccactgaagaagatgcaggaatgttg
gtataccgtgacagaacccctgagcgttatcatgttcgaccaggtccccctgcaccttgg
gatccacctgcttttgagggagatttggctgaacgagagagacttcttagagaagaagaa
tactatagaagaatgcagggacaactcgtgagacaagaaccatggccaccgaaccacaga
gggccaccgggtcctgctcatcattttgatccgaatgctcctcgagctagaatggaccca
agagctggagatagaggcagatatcatgatgaacgacgtagaagaggaagaaccccacca
atggaaagagggggacgtgatcgtgacgggagaccttatgatagggaagatgagcgttat
tctcgtcgcagaagaccagaaattgaagaaaccgccagaagtgggtcacaaagaggttca
agagatcgtgaccgggatagagagagaacatcagatacttcgaagcgatctagcaatgca
cgtaaagaaggtcgttcatctagaagagatgaagcttctagtcgatcttcgcgaaaagaa
gaagaaacaagatcaaggaagagaaccagagaccatgataagcaacaagagaagaaacca
gtaatcgtgattctagaagtaaaaaaagaagcagaggaggccagagaactgaaacaccaa
ggggacagaaacatagagccagttcctcctggtgaaggagatggaacaccagtccgagat
gaagctcttgttgaattcaggaacgaaagcataaaaatcaaagtattcaacgacaaagcg
aaaccaagatcagaaaaatcaaggaatcgggataaaggtttctcgagagatcaagaagat
ggaaaacacaggcgtaagagagatgagagaattatttcagacaagagagactctcaacgt
caaagaagacctagagagcaaaaaatctcaggaggtgaaagaaaaatgactgcaaccaac
agggaagaaggggataaaagaacccagagtccattacctggggtagaagatagaactcca
gaaacgaaaacaacttccgaaccagctattgaaagatcacccaccccgacccttgacgag
aatatttcaccagttcttattgaaggtgcagatgaccctgttttagatgatttgatggaa
actactactccacagccagaattgatgcctgaatcagttgataacgcttctaatgaaaat
ccagaattgactgaaaatgaaaacaagtcgcacgcaatgaatgaaattccagaaatcatt
caagagaaacttgaagaggaactgccccaacaaccagagcgtaagaaaagtaaaagagtg
aaagggtcacgcaatgtttctaaaacaaaacatagaaagaaaccgtcacccagggagagt
aataaacagaaggatgaagaacgatcccaagttgtggaatatgatggctcaggtccgaca
ccaacaggagatgaattggtgcagattacaattccaaagtccaagtgggagtcagatgat
gaatcggggtcgcagcgaaatgacaaggtaaaagctttaactaaggtttctccaaaacct
gataaaaagaatgcaaaatctaggaaaattcgcctcaagaaacctggaaaatcaagtaac
acagaagctattaaggaagacaaacaaaaaaataataatcaggatgaagaaaatgaaaat
ttgaaaaagaattcagcttcaactgtgcaatcaaagaagtcgacgccatctccagcgatt
agtgacagccgaagagtggttgtatcgaatgaaccatctgctgatattcacagttcatca
aaacaatcacgattgttacggccgtcgatttctaacattgatgaagcctcattcgaacca
gattacagtggcaacgaaagtgaaaaagcattatccaattatgcaccttccgatattgat
gctagtgaccatgaagagaacaaaaaagccccaagagaaaaaagactttcaacctctata
actgaagaacctaaccctcgccgaaaagaaacatcttctaaaagaggaaaacatagtagc
gaagtgtctcggaaagcaaaggaggaaaaatatgaggatgaatttgcggattctttgcca
gaaggaagtgaaggtgattatgagaaaatgaagaagaaaaggaaacacaagaaaaagaaa
aagcataagaaacatcacagacaacaaagtcaagatactgaggatgatatttcaataagg
gatgattatgatgacgagaatttatttcaaactgattctgacgaagaaaagttcgagaga
atgaggcaggaagaagaacgtagaaaaattgagacagcacagagacaagtcatctatcaa
gatgaaagatatagtagcagaagggaaaatggaaagtctaagaaagagcagagatcagtg
gagaggtctgaaagagaccaaagaagacatcataagcacgaagataaacaagttagcgat
aggaaacgaagatatgaagacattgatgaatatttcagcgaagaagaagatagacgatcg
aagaaaaaatatcaggggtcatctgagactatgaaaagaaaagataagaggcgacgagta
tctgacagaagtgaaagatattacgcggaagatgattatatgaatgaagacgaatactat
caatcaccagaaccggaggaaagaaggaaacacaaaccaaaaaaacagaaatttaaaaaa
actaaaaaagaaccacttaaggaagtaagaacagttgcatcgagaatacaacgttccaga
taa
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integrated database retrieval system
