Styela clava (leathery sea squirt): 120331706
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Entry
120331706 CDS
T07291
Name
(RefSeq) putative transcription factor p65 homolog
KO
K09254
c-Rel proto-oncogene protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120331706
Transcription factors [BR:
sclv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120331706
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
120331706
NCBI-ProteinID:
XP_039254774
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MNTQYTNMVMSHRPQIVITEQPKQRGMRFRYECEGRSAGSIPGVNTNSDRKTWPTIQVIN
YTGEVVIRVSLVSKDTPPRPHPHSLVGKDCSNGICQVRVNPETQMTACFSNLGIQCVKRK
EVSGALQERQKLGVDPFNTFKDSDPQAVDIDLNIVRLCFEAFISQGNQHLVLDPVLSKPI
FDKKATCSALLRICRVDKSFGSCKGGDEVYLLCDKVQKDDISICFFEVETGWESYGEFSP
TDVHRQVAIVFRTPPYKNQQIREATKVFFQLKRSSDGETSDSKDFTYLPLQHEQPHINRN
HPQRRVDQSLIRTNQILQDHIHRKAETHSREPYLSAIGGPQPGKRARPSFPDPPSRMMPD
AFPAVLDKFLKDSKYMPAPYPSSSRSMFSPSSPAPVYPSTDNRYSHVQMQPLVYNPNTIF
GHPTSSANPQQTYTPLVVPQLEPAVTQMGQPDPNEMSRLNTGLLSSQRIREGQNEFISQP
DLGMGTPSQRGIGEFEEINATIGFDLGIESLGSLRDVSLNVDDELGAEMKQMSIEENISL
TDLVKPEPTQDVPFPNPNPPTTTLAQYPQQAPPIFDIQAPSPLQFQAPPPPYHRPSEQSQ
ERPQVVHNQLTSAYEIEQSIPSFDLNDPQGQFSLDASQNDIEDMMKNNPN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaatactcaatacacaaatatggtgatgtctcatcgaccacaaatcgtgatcacagag
caacctaaacaacgaggaatgaggtttaggtatgagtgtgaaggaagatcagcaggtagt
atacctggagtcaacacaaattcagacagaaaaacatggccaacaattcaggtaataaac
tacacaggagaagttgtgatcagggtttcattagtatcaaaagatacaccgccacgacct
catccacacagtttggttggaaaggattgctcaaatgggatttgtcaagttcgtgttaat
ccagaaactcaaatgactgcttgtttttcaaatctcgggatacaatgtgttaaacgtaaa
gaagtatcaggggcattacaagaacgacaaaaacttggtgtagacccattcaacacattc
aaagacagcgacccacaagcagtagacattgatttaaacattgttcgactgtgttttgaa
gcattcatcagtcaaggaaatcagcatttagtattagatcctgtattgtcaaaacccatt
tttgataaaaaagcaacttgctcagcgttgctgagaatctgcagagtagacaaaagtttc
ggaagttgtaaaggcggagatgaagtttatttgttgtgcgataaagttcaaaaagatgat
atttctatttgtttctttgaagtcgagacaggctgggaatcgtacggtgaattcagtcct
acagacgtccaccggcaggttgcaatcgtttttcgtactccgccatataagaatcagcaa
attcgcgaagcaacaaaggtgttttttcaactcaaacgttcgtcagatggtgaaacaagt
gattcaaaagatttcacatatttaccgttacagcatgaacaaccccatattaaccgaaat
catccacagagaagagttgatcagtcactaattcgaacaaaccaaattctgcaagaccac
atccatagaaaagcggaaacacattctcgagagccatatctatcggccataggaggacct
caaccaggtaaacgcgcacgacccagttttcccgatccaccttcaaggatgatgccagat
gcgtttcctgcagtgctggacaaattcttgaaagattctaagtacatgcctgcaccatat
ccatctagtagccgatctatgttttcacccagtagtcctgcccctgtctacccgtcaacg
gacaatcgttacagccatgtccaaatgcagccgttagtgtataatcccaacaccatattt
ggtcatccaacatcatctgccaacccacagcaaacctatacgccgcttgtcgtgccgcag
cttgaaccagcggttacccaaatgggacaacccgatcctaacgaaatgtcaagactaaat
acaggtttactatcatcacagagaataagagaaggtcagaatgaattcataagtcaacct
gatcttgggatgggtactccatctcagagaggaattggggaatttgaagaaattaatgcc
accattggttttgatttgggcattgaatctttggggagtttgagagacgtcagccttaat
gttgatgatgaattaggtgcggaaatgaagcagatgagtatagaagaaaatatttctctc
actgacttggtgaaaccagaaccaacacaagacgtgccttttcctaacccaaaccctcct
acaacgacacttgctcaatacccgcagcaggcgcccccaattttcgatattcaggctcca
tcaccactacagttccaagcacctccacccccttaccacagaccctctgaacagagtcaa
gaaagaccccaagttgtccacaatcaattgacatcggcttatgaaattgagcaaagcata
ccttctttcgacttgaatgacccacaaggacagttttcattggacgcatctcaaaatgac
atcgaggacatgatgaagaacaatcctaactaa
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