Styela clava (leathery sea squirt): 120331858
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Entry
120331858 CDS
T07291
Name
(RefSeq) uncharacterized protein LOC120331858 isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sclv03041
]
120331858
Spliceosome [BR:
sclv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120331858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Motif
Other DBs
NCBI-GeneID:
120331858
NCBI-ProteinID:
XP_039254952
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MSYNYAAAYGTSYGQYAAAQPSSYSTQTPATSGYGHYGQQAASGYGTSGSATTASTTASS
VSSYAGYGSTAAATTTTAQSTYNFGGYGYNYGTDATSGYSASTATNAALQAFQVTKQSWY
SSPNASSGTAAAPAQQQQQQQQQQAVTSSQTASQQQYGQYIQQYQQQISAYQQYVGNTAG
STNQQQQQQQQQGLFKTPQALAAKPKTDTQQQSTGWGAYNQRQSPSAIATRTDTAKTGWG
VYQQQQQQQQQPGIASQQTSSLTNQQQKPAGLVYRSPMKYSTDTQYGSTQGYTANQAYKS
PAGNTTQAGYGTSSPSQGYGSSTQQQGYGTQQSQGYGNNQQSSYSSPSQGGYNANQGYKS
QSTGYQTGGNQGNQQTYSGNYNQGNNQGNYNRGYGQSPNNANGNVGMNNNMQGGQRGGPV
RPLLTQRSPMGGGGGNQSYGGNNQGPRDGPDIPPFPRAWHSQDGYEGPPRQDNWQQQRNF
GEQREQRWGRGGGNIGGGGGRFGNQQQQQQTPQPRGIYSNNSRNARGSSGSNRELWSPAN
KKSGTSMINKMDKDVKEVKKEFGEVIDKEKHSEIKTFLYAWLGARKLRPTYDIRQIGERP
NISFRCDLRVDKYNFVGVGKAANKKEAQTTAAWKFADYLVRMGEINNSELPNKNIKVPDD
KEGDIGDVKEEAVDDIPDEEIFVPKKDNNMTNRNRKGGRDRDRRNKRGNWGPAPRPLLGG
GGGGGEIRPLMALPVGPSWDGPMGPPPPHLMRMPHPGMMDFRPPMWDGPPMMGPPHHMGP
PHMHMRPGMPPPFMRNRQNDFWRRRDIEERMMDMSRGNDWAHPEDMFISQMIRNQQEAER
KRGGSGVPRPIMQPMEAMPGEWERVQQTRPVITSDDRHMMTKHAEIYPQEGELKNLHRIV
NTVEQALKLLSDKFVNEDHPKEEPKKEEPEKMEKDETKKEGEEEKKESQEAIEEKKETEG
ETSVENKEEKKDESEKKDEEEKKEGEEKKEEKRAKIKILKRPKKTPKQVDTRPRVLCGVN
RIGPLAKGLLITKDDHVELALLCGEIPTIKLLDRIMEHIDEKLFTVDEDFKLNVIKMEEE
AGFLIKSVEDTPVEVMVTLTAMALRKPAKKEAETKKESKKDDEENDNKEEKETTTAEEPD
PEGMLPKAKMLEALACLRHTQWFQAKACSIQSCVILTRILRDLQRRDEMWSHIAEWPLEV
LIYSCLSSSEEQMSPGDACRRFFEVLAGGLLLPGMPGVADPCEKASLQRDVLDCLTVQHR
EEITTVSQKYLRQIAFREIHFILGMEKLSPSFKMDNHSNHQNKYGNKNQSTDVKQDAEVE
KERPADANNARKRRFEHNGNDSVAESPKRSLTDEEDTDTQQNLAELSISDEASENRTSGG
DQTETDKDQTPAEEDSKQPSKEEEEDVMETAEDSGERELTKEEEDALLEEENMDT
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaattatgccgctgcatatgggacctcctatggtcaatatgctgctgcgcaa
ccatcatcttacagcactcaaacgccagcaacatctggatatggacattatggtcaacaa
gctgcttcaggatatggaacatcaggatccgcaacgactgcttctacaacagcttcaagt
gtgagctcatatgctggatatggctccactgctgctgctactacaacgacagctcaaagt
acttataactttgggggttacggttacaattatggaactgatgcaacttctggttatagt
gcttcaactgccactaatgcagctttgcaggctttccaggtaaccaagcaatcttggtat
agtagtcccaatgcatcaagtggtacggctgcagctcctgcacaacaacaacaacaacaa
cagcagcagcaagccgtaacatcgtcacaaacagcaagtcagcaacaatatggacagtac
attcaacaataccaacagcaaatttcagcttaccagcaatatgtgggaaatacagcagga
tcaactaatcaacaacaacaacagcagcaacaacaaggactattcaaaactccccaagct
cttgccgctaaacctaaaactgacactcagcagcagtctactggttggggggcatacaac
caacgtcagtctccttcagcaattgctaccaggactgacactgcaaaaacaggttggggt
gtttatcaacaacaacaacagcaacaacaacaaccaggcatagcaagtcaacaaacatct
tctctgaccaatcaacaacaaaaaccagctggactagtttacagaagtccaatgaaatat
tcgactgacacacagtatggatcgactcagggctacactgccaatcaagcttataaatca
ccagccggaaacacgacacaggctggatatggcactagtagtcccagccaaggttatggc
agttctactcaacaacaaggatatggaacccagcaatcccaaggttacggaaataatcag
cagtcatcatattcaagtcccagtcaaggaggttacaatgcaaaccaaggatacaaaagc
caatcaactggttaccagactggtggaaaccaaggaaaccaacaaacatacagtggtaat
tacaatcaaggcaacaatcaaggaaattataacagaggatatggacaaagcccgaataat
gcaaatggtaatgttgggatgaataacaacatgcaaggtgggcagagagggggcccagtt
agacccctgttgacccaacgcagcccaatgggaggagggggtggaaaccaaagttatggt
ggtaacaaccaaggtcctcgagatggaccagatattccaccgtttccaagagcgtggcat
tctcaggatggatatgagggtccaccaaggcaggataactggcaacagcagcgaaacttt
ggcgaacaacgagaacagcgttggggaagaggagggggaaatattggcggtgggggagga
agatttggaaatcagcaacaacaacaacaaacaccgcaacccagaggaatttatagtaat
aactcgaggaatgcaagaggttcctcaggatcaaacagagaactatggagcccagcaaac
aagaagagtggaacgtcaatgattaataaaatggacaaagatgtgaaagaagtcaagaaa
gagttcggagaagtaatcgacaaggaaaagcattcagaaatcaagaccttcttgtatgca
tggcttggtgctcggaaactgaggccgacttatgacatcagacagattggtgaaagacca
aatatctccttcagatgtgatcttagagttgataagtacaattttgtcggtgttggaaaa
gcagcaaacaaaaaagaagcgcagacgacagcagcctggaaatttgcagactatcttgtt
agaatgggagaaatcaacaattctgagcttcccaacaaaaatataaaagtacctgatgac
aaggagggagatataggagacgtaaaagaagaagccgttgatgatattcctgatgaggaa
attttcgtacctaagaaggacaacaacatgactaatagaaatagaaaaggcggtcgtgac
agagatcgtagaaataagcgtggaaactggggaccggctccaagaccactcttaggaggg
ggtggcggtggtggagaaattcgtcctctcatggcattaccagtaggaccttcgtgggat
ggaccaatgggacctcctcctccacatctgatgagaatgcctcacccaggaatgatggat
ttcaggccaccaatgtgggatgggccacccatgatggggccaccacatcacatgggacca
ccacacatgcatatgagaccgggcatgcctccacctttcatgagaaacagacaaaatgat
ttctggcgtagaagagatatcgaagaaagaatgatggatatgagcagaggaaatgactgg
gctcacccagaagatatgttcattagtcaaatgataagaaaccaacaagaagctgaaaga
aaacgaggaggttccggagtccctcgtcccatcatgcaacctatggaagctatgcctgga
gaatgggagcgtgttcaacagactcgtcctgttatcacatcggacgatcgtcacatgatg
acgaaacatgcagagatttatccacaagagggagaattgaaaaatcttcacagaattgtc
aacactgtcgaacaagctctcaaacttttgtcagataaattcgtcaacgaagatcatcct
aaggaagaacctaaaaaagaagaaccagaaaaaatggaaaaagatgaaacaaagaaggag
ggagaggaagaaaagaaagaatctcaagaagcgatcgaggaaaagaaagaaacagaggga
gaaactagtgtggaaaataaagaagagaaaaaagatgagagcgagaagaaagatgaagag
gaaaagaaggaaggagaagaaaagaaagaagaaaaaagagcaaaaattaaaatactcaaa
agaccaaagaagacgcccaagcaggttgacactcgtccgagagttctctgtggagtcaac
aggattggacctttggctaaaggacttctcatcaccaaagatgatcacgttgaactagct
cttctctgcggagaaataccgactattaaattgttggacaggattatggaacacattgat
gaaaaattattcactgttgatgaagatttcaaattaaacgttataaaaatggaggaggaa
gccggatttttaatcaagagtgtggaagatacacctgtcgaggttatggtcactctcact
gctatggctcttcgaaaacctgctaaaaaggaagcagaaacgaaaaaagaaagcaaaaaa
gatgatgaggaaaatgataataaagaagaaaaagaaaccacgactgcagaagagccagat
cctgagggaatgctgcccaaggctaaaatgttggaagccctcgcctgtcttcgtcacact
cagtggtttcaggcaaaagcttgctccattcagtcctgcgtcatcttaacaagaattctg
agggatttgcaaagaagagatgaaatgtggagtcacatcgctgaatggccattggaggtc
ctgatatacagttgtctcagtagttctgaagagcaaatgagtcctggtgatgcttgtagg
agattttttgaagtacttgctggaggtttattgttaccaggtatgccaggagtagcagat
ccatgtgaaaaagcctctcttcagcgtgatgttctcgattgtcttactgtgcaacacaga
gaagaaattacgactgtttctcagaaatatttgagacagattgctttcagagagattcat
tttattcttggaatggaaaagctctcaccctcatttaaaatggacaatcattctaatcat
cagaacaagtatggcaacaagaatcaatcaacagatgttaaacaggatgctgaagtcgaa
aaagaacgaccggcagatgccaataatgcaagaaaacgtaggtttgaacataatggcaat
gatagtgttgcagaaagtccgaaacgttctttgacagatgaagaagacacggacacacag
cagaacttggccgaattgtcaatttcagacgaagcatctgaaaatcgaacaagcggtggc
gatcaaacagaaacagacaaagaccagacaccagcggaagaagactcgaaacaaccgagt
aaagaagaagaagaggatgttatggaaactgctgaagattctggtgaaagagagttgact
aaagaagaggaagatgcattgttagaagaggagaacatggatacataa
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