Styela clava (leathery sea squirt): 120331960 Help Entry 120331960         CDS       T07291                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism sclv  Styela clava (leathery sea squirt) Brite KEGG Orthology (KO) [BR:sclv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:sclv03000]     120331960    04121 Ubiquitin system [BR:sclv04121]     120331960 Transcription factors [BR:sclv03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     120331960 Ubiquitin system [BR:sclv04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     120331960 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf_CCCH_4 zf-CCCH_4 PaaA_PaaC zf-RING_UBOX Vesi_VP2 Prok-RING_4 zf-RING_2 Motif Other DBs NCBI-GeneID:  120331960 NCBI-ProteinID:  XP_039255077 LinkDB All DBs Position Unknown AA seq 1256 aa AA seqDB search MPLHPFQWTDFLTCANCNKEFSIEPKRFPITLLCSHSICQECVGQVQVKGCPQELNSSPP DLSTLGVNFALLQLVIYQNNLGRSASYRPKDPEKLLSKLGADYSSYTKCCHLVEGLAIHL QDIKNGILPNESDLTKPMLRKLVTLVQSQLALEEGRLKMLRSCRAIGERASTELILAHQN PATLSGNLWTAVRARGCQFLGPAMQEEALKLILLALEDGSELSRKVLVMFVVQKLQQQFS QASKTSIGHVVQLLYRASCFVVKKRDGDSSLMKLKEIYRTYPALRREHDAQVVQIAREAG LRIAPDQWSALLYGDQGHKSHMQSVIDRLQSGESLQRCIQDLDNAIKSSDSTNLKSLIPH FEILAKISAESTLSPQDLHNNDWNFLISCLQSVNFIIKELIIFSKSHKPHDLWHDEESPS QTAKFKTSFCRDIKSKGRCPRGSSCTFAHSEEELHHHRNKRKKASLGYPARDKRQPNAAS PASNADVQQRILDVDHRQAGIRATPPIAPVQPRQGEPVPGNHVYSYPQQSGYQQHLPVQQ PPMMQQRPISPQMHVPIAPQHFRPPPSYYGYDPYRQQQHAGVEGNYNQTYNQYSYGPPPN QQYSHIPTGKPIPIENSMPQHLQPRNEQPPVKSGNMYEQNLPHFTVTLSFQSKPNADPMS ASQQVVVAQQQQMGRPSSVNVSQSMTENMTLSRPVDTFTSQSIPSRQQDTMTRTQFMRQR AMATPGIINNRLVDPSPPPYPMQTNTVPKNMGSSGFYPIQPQHAPTNEPIDRSQMYRVQS PVYQSSPMQVRDPRVAVVAPQQIIQQPPPSATPTHIYDPGMNMVFSNNFQQQEVIAQTVP CPSPFMMTQSPVNQPSNTPVLIPVVPVTQYQVIDQQMVHVPSQMIPVTLPYVPTVVHFED ITYAREKQISLCDDIASELSIPKSIDDATVAQLERRKEQILDKLLHNQSQQKDDVCPPPD VMPSTDAERFYDVWNCQSYSPLFNLQTAVTVLPENLQCEDYSSNVVDVIAEIDTRTKQVT MRGTDIINPSHARNERTLDDTKMHRLMLEKNDDMKNAESSSESSQPLKALIYYSSGPPDK EGHAVVVNNDDDEMIPFSDRPTVSKYGPIARSVRTRPSNTDSVQVNANADVSTHSVAASN DVPNQKQSAAIKRSVYSSFENMHAVSYFPASYPRSRESFSTQNLKNHPCIPAAATGAVPS RCISITQAASNSKLLHREETALQQNKPPNPTEDLQLAMELQQIELGIHQKKQQHYQ NT seq 3771 nt NT seq  +upstreamnt  +downstreamnt atgcctcttcacccatttcagtggacagattttcttacgtgtgcaaattgcaataaggaa ttttctattgaaccgaaacgtttccccataacattgctgtgcagtcattcaatatgccaa gaatgtgttggtcaggtacaagttaaaggttgtcctcaggaattgaattcatcaccccct gacctttcaactcttggagtgaactttgcccttcttcaacttgtgatctatcagaataat ttgggtcgaagtgctagttatagacccaaagatccagaaaagcttttatcaaaacttggt gcagactattcaagctatacaaaatgttgccacctggtagaaggtcttgccatacatctg caagatataaaaaatgggattctaccaaatgaaagtgacttaacgaaaccaatgctgaga aaattggttacacttgtacaatctcaacttgcattggaagaaggaagattaaaaatgttg agatcttgtcgtgcaattggggaacgagcatcaactgaactaattcttgctcatcagaat ccagctacgttatcgggaaatttatggacggcagtaagagcaaggggatgccagtttcta gggcctgcaatgcaagaggaagctttaaaactgatacttctagcattagaagatggatca gaattatctagaaaagttcttgttatgtttgttgttcaaaaattacagcaacaattctct caagcatccaaaacaagtattggacatgtcgtacagttgctctacagagcttcttgtttt gtggtgaaaaagagagatggggattcctcactaatgaaattaaaagaaatttatcgaact tatcctgcgctaagaagagaacatgatgcacaggttgttcaaatagcgagagaagctggt cttcgaattgcccccgatcaatggagtgcattattatatggagatcaaggacataaatca cacatgcagtctgtaatagatagattacaaagtggagaatccttacaacgatgcattcag gatttagataatgcaatcaagtcgagtgattctacaaatttaaagagtctgataccgcat tttgaaatattggcaaaaatatctgcggaaagtacgctgtctccacaagaccttcataat aacgattggaattttctcatcagttgcttgcagtctgttaatttcattataaaggaattg atcatattttcaaagagtcataaaccacatgatttatggcatgatgaggaatcgccgagt cagactgccaaattcaaaacatcattctgtagagatatcaaaagtaaagggagatgtcca agaggttcttcttgcacatttgctcattctgaagaagaattgcatcatcaccgtaacaaa agaaagaaggccagtcttggatatccagctagagacaagaggcaaccaaacgctgcatca cctgctagcaatgctgatgtgcaacaacggattctagacgttgatcatagacaagcagga attcgagccactcctcctattgcaccagtacaaccaagacaaggagagcctgtacctgga aatcatgtctactcgtatccacaacaaagtggttatcaacaacatttacctgttcaacag ccacccatgatgcaacagcgaccaatctctccacaaatgcatgtcccaatagctccccag cactttcgaccgcctccatcgtattatggatatgatccttatcgtcaacaacaacacgca ggggttgaaggcaactacaatcagacttataatcagtattcatacggacctcctcccaac cagcagtattcacatataccaacaggaaagccaattccgattgagaattccatgccgcaa catttacaaccacgaaacgaacaaccgcctgtaaaatccgggaacatgtatgaacagaat ttaccacactttactgttactttgtcgtttcaatcgaaaccaaatgccgacccgatgtca gctagtcagcaagttgtggttgcgcaacaacagcaaatggggagaccgtcgtctgtcaat gtcagtcaatccatgacagaaaatatgactttgtcaaggccagtcgacacatttacttca caatcaataccaagtaggcaacaagacacaatgactcgcacacaatttatgagacaaagg gcaatggctacgccaggaatcatcaacaatcgccttgttgatccatcgccaccgccatat cccatgcaaactaacactgttccgaaaaacatgggttcatctgggttctatccgatacag ccgcagcatgcacctacaaatgaaccgatagatcgctcacagatgtatcgcgtacaaagt cctgtttaccaatcttcgcccatgcaagttcgagatcctagagttgcagtggtcgcacca caacagattattcagcaacccccgccttcagctacccccactcatatatatgatccagga atgaacatggtgttttccaataactttcaacaacaagaagtcatagctcaaactgtgcca tgtccaagtccattcatgatgacacagtctcctgtaaatcagccatcaaatacacctgtg ttgattcctgtagttccagtcacacaatatcaagtcatcgatcaacaaatggttcatgtt ccatcccagatgataccagtgacgctgccttatgtgcccacagtggttcatttcgaagat ataacgtatgcaagagagaagcaaatatctctttgtgatgacatcgcttctgaattatct atcccgaagtccattgacgatgctactgttgctcagctagaaagaagaaaagaacaaatt ttagataaattactccacaatcaatctcaacaaaaggatgatgtttgtccaccaccggat gtcatgcctagtacagatgcagaaaggttttatgatgtttggaactgccaaagttattca ccactattcaatttacagactgctgttacagtcttgccagaaaacttgcaatgtgaagat tattcatctaatgttgttgatgttattgctgaaatagatacaagaactaaacaggtcaca atgcggggtacagacattataaatccatctcatgctcgtaatgaaagaacattggatgac acaaagatgcatagacttatgttggaaaaaaatgatgacatgaagaatgctgaatcttct tcggaatccagtcaacctttgaaagctttgatttattattcaagtggaccaccggataag gaaggccatgctgtagttgttaataatgatgatgatgaaatgataccgttcagtgatcgt cctactgtatcaaaatatggacctattgcaagatctgtacgaacgagaccaagtaataca gattcggttcaggtgaatgccaatgctgatgtaagtacacattctgtagctgcatcaaat gatgttccgaatcaaaagcaaagtgcagcaattaagaggagtgtctactcttcattcgag aacatgcatgctgtttcatatttccctgcttcgtatccaagaagtcgtgagtcattttcg acacaaaacttgaaaaatcatccttgtatacccgctgctgccacaggagcagtgccaagt agatgcatatctattacccaggcggcttctaattcaaaacttctccatcgggaggaaact gcgttacagcagaataaaccaccaaatccaactgaagaccttcaacttgcgatggagttg caacaaatcgaacttggaattcatcagaaaaaacaacaacattaccagtaa

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