Styela clava (leathery sea squirt): 120332081
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Entry
120332081 CDS
T07291
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120332081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120332081
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120332081
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Det1
7TM_GPCR_Sri
Motif
Other DBs
NCBI-GeneID:
120332081
NCBI-ProteinID:
XP_039255218
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MQVPDASDRKRRKVDGVERKLDIVRRRIRNQNVFHRIQQREIHKLKPGTPWHVTRDFYKN
IFPNFTVVNVEKPPCFLRKFSPDGRHFLAFSADQTSVEIFEFKGCDAAENLLSSVSSDVM
HEKSSRLQNPAIKAFYDRVKEQLFATFFKRKHLVPVATEGQHLNRECSLFTEDSRYVIVS
AACHTRQEPRPAFSDIYTNNESISPNPRSPLENYTLHVVNIKTGVLCFSREFNCDKIFPS
HNQGLYLYRNTLAILSVQHQTIYIFQVTNDGELIETNTIGRFCFDDDQFVLSNLRDPAAE
EALRMPYAEKPINSLKHRILVHLYKQAEKQGREHVRRFHQHFEFLCSLRMWKMQLLDENH
LLIKYASEDVVSSRVQEPGAQPSFFVTYNIPDAKVLAVYENTSCDLLSIFERHPDLFRPP
GSPADTGNPGQPGGAWQQQAAAAANVHTLKIQKRFKETIINAKYGGHTEAIKRLLAQLPV
PAQSHNCSPYLDLSLFSYDDKWISSLERPKSCGDHPIRFYARDSGILKFRIYAGKGGSHP
ATSSRRLVAFTFHPFEPFAISVQRTSTDYVVNFHFRHARGADG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttccagatgcgtctgacagaaagaggagaaaagtagatggcgttgaacggaaa
ttagatattgttcgcagacgtataagaaatcagaatgtttttcacagaatccagcaacgt
gaaatacacaagttaaagcctggaactccatggcatgtgacgagagatttttacaaaaat
atatttccaaattttactgtagtaaatgttgagaagccaccatgttttctaagaaagttt
tcaccagatggacgacattttcttgcattttcagctgatcaaacatcagtggaaatattt
gaattcaaaggctgtgatgctgcagaaaatcttctttcatcagtatccagtgatgtcatg
catgaaaaatcaagtcgtttacaaaatccagcaataaaagctttttatgacagagtgaaa
gagcaattatttgcaacgtttttcaagcgaaaacatttagtacccgtggcaacagaaggt
caacatttaaatagagaatgcagtttgtttacggaagattctcgttacgttattgtatct
gccgcatgtcacacaagacaggagccaagaccagccttttcagatatttatacaaacaat
gagagtattagtcctaacccacgttcaccactggaaaattatactctgcatgtagtaaac
ataaagactggagttttatgcttcagtcgggaattcaactgtgacaaaatatttccttct
cacaaccaaggactttatctgtatcgaaacactcttgctatactttcagttcagcatcag
actatatacatatttcaggtaacaaatgatggtgagttgatagaaacaaatacaattgga
cgattttgctttgatgatgatcagtttgttttatcaaacttgcgagatccagcagcagaa
gaagcactgagaatgccttatgcggagaaacccatcaattcattaaagcacaggattctt
gtgcatttatacaagcaagcagaaaagcaagggagagaacatgttcgtcgttttcatcaa
cattttgaatttttatgttctctcaggatgtggaaaatgcagttgctagatgagaaccat
cttttaattaagtatgcaagtgaagatgttgtgagttcacgagtacaagaacctggagct
cagccatcattttttgttacatataatatacccgatgccaaggtacttgcagtatacgaa
aatacgtcatgtgatcttttatccatctttgaacgtcatcctgatttattcaggcctcca
ggatctccagcagacactggtaaccctggacaaccaggcggtgcttggcaacaacaagca
gcagccgcagctaatgtacacacactcaaaatacaaaagagattcaaagaaacaatcata
aatgcaaaatatggtggtcatacagaagcaatcaaaagacttcttgcacaactaccagta
ccagcgcagtcacataattgtagtccgtatttggacctttctttgtttagttatgatgac
aaatggatatcatcactcgaacgtcctaaaagctgtggagatcatcccataaggttttac
gctcgagattcgggaatactgaagttccgcatttatgcaggtaaaggaggatctcatccc
gccacgtcatcaagaagattagtagctttcacttttcatccattcgaaccttttgcaatt
tcagtgcaaagaacgagtaccgattatgtagttaattttcatttccgacatgcaaggggt
gcagatggatga
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