Styela clava (leathery sea squirt): 120332159
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Entry
120332159 CDS
T07291
Name
(RefSeq) ATP-dependent DNA helicase Q5-like
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120332159
Enzymes [BR:
sclv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
120332159
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
120332159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
120332159
NCBI-ProteinID:
XP_039255285
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MATGYKKQTPGQRKHIPCILNTLMNIFKHKQFRSDLQRNAIETICKGNQDAFVSMPTGAG
KSLCFQLPAIYLGGVTIVISPLIALMQDQLEHMRKLKIPAETLNSKQTQADRKKTMADLM
SDSPKTRLLYITPEQANTTTFLDIIKHLKLEKQLSLFVIDEAHCVSHWGHDFRPDYMKLG
SLRSKLGDVPFIALTATASPKVEKDIISSLQLRKPLATFKSGVFRPNLFYSLKYKDILKD
PYLDLKTLALKAMGPKSFDGTHEGCGIVYCHKRDDCTLVAGQLLRRGLMARAYHAGLKDK
DRTQVQEDWMNGKISIIVATISFGMGVDKANVRFVAHWTMPKSMANYYQESGRAGRDNKT
AYCCLYYSRNDRDLMSFLMRNEVQRKKNKLGESAYKRYSATVTGHFQSMVKYCENINCRH
ESISLFFGNKAPECNSMCDHCHDLKAFKKHHDDFQKTQLSSVGRTRMGEKTEKIACPTGN
FDPDLYAGGKKGFGFDRTVEDDWGEGGSGGGSNDITSKDWSEFFKEQFSMRKSATQTKTQ
RKRSKESDEDWPDDCPLIKPESNRLPKCTWKIRKGCYDRLHVTLTSNYEATQGKSDASDW
ESHCAAADLEFEIFSTAKNLMIYRAHVVRKVNEIRKMTTEKKLHDQFEKSKNGDSKSRSK
QSFDSEKEDFQQSTTLKRKRASHMYSLCGVDNPTGDAFQTAANLLKDNKMNQEENSTLEK
SAKCEPPLKKTAITFDDKVQCKSIERYIKPNTSYKKSSKKLTKSNQNKCDTVKIAEAQQN
VAKDESEPPSKKRLSSSEKPTQTQKTAILKTCDKKSDVSNNEKKFSIRDWFNSSSAKKHE
VSNKSETKEIVDLTLSDSDDSAEEERLFGRSTPSPVSPINIKMEKPDKLKTREIEKMSDS
SSEDESDDGPVIVSAYNRYQTGPLIDLSDSEDEIEKSQSEETDNLFTGITSLDKMSSASN
EDRTPERDTPSFLKCSDSKDLENNKSKSDKTIFEQILSGDDKDLQFSTSFVSKSEDSSSD
PIDSSNVTQPLSQQRRTFSEKSEHIINFTSENVSQISPCSFVSTSDDLTTPFVRPVSGDE
PKATIVTTSVNDKLKIHPFHDQLTPKVESEVNNDSHPHSLHTQQDDSKKFNFKRELNNNT
ERVAIKSESPVSDTTINKPSDAKTRFNLTVSLECGQQNQETAVASFRKASKEILKIVDGL
PALKAICETSSTNVFQDVGNRNDSSPLLKVLEQPEPREDMSFHDKDDRLLYNLPMKQLDS
KVDEQSKPKNVPEIKNDKRLKEISDIVIRYLSPFYKRGFIKNKDLFKSFAKKLTNLMLTE
ASMVEKDEKKIARDIVDNFFKHCTKLKSENDLVRLENIFKNFMKSYG
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggatataaaaaacaaacaccaggacaaagaaaacatattccatgtattctg
aatacattaatgaatattttcaaacacaaacaatttagaagcgacttacagaggaatgcg
attgaaacaatttgtaaaggaaatcaagatgcatttgtttccatgccaacaggagcaggg
aagtcgttatgttttcagttacctgctatttatctgggtggagtcaccatagtaatatca
cctttgattgctctaatgcaagatcaactggaacatatgaggaagttgaaaattccagcg
gaaacgctcaattctaaacaaactcaggctgataggaaaaaaacaatggctgacctaatg
agtgattccccaaaaacccgcttgctttatataacacctgagcaagcaaatacaacaaca
tttcttgatattataaagcatttgaaacttgaaaaacaattatcattattcgtgattgat
gaagctcattgtgtatcccattggggtcatgacttcagaccagattatatgaagcttgga
tcacttagatcaaaactaggagatgttccttttattgcattgactgcaactgcttctcca
aaagttgaaaaagatatcataagttcactgcagttgcggaaacctcttgctacttttaaa
agtggagtgttcagaccaaatttattttattcgctaaaatataaagacattctgaaagat
ccatatttggatttgaagactttagcactcaaggcaatgggaccaaaatcttttgatgga
actcatgaaggatgtggaattgtgtattgtcataaaagagatgattgtacattagttgct
gggcaactcctacgcagaggactcatggctagagcgtatcacgcaggtcttaaagacaaa
gatagaacacaagtacaagaagattggatgaatggaaaaatatcaatcattgttgcaact
attagttttggaatgggtgttgacaaagctaatgttagatttgttgcacactggacaatg
ccaaaatcaatggcaaattattatcaagaatcaggtagagcaggaagagataataaaact
gcatattgttgtttgtactattccagaaatgatcgagatctgatgtcttttctgatgcga
aatgaagtccagagaaaaaaaaataagttaggagaatcagcatacaaaagatactctgct
actgtgacaggacatttccaatcgatggttaaatattgtgaaaatatcaattgtcgccat
gaatcgatttcactattctttggcaataaagcacctgaatgtaattctatgtgtgatcat
tgtcatgatttgaaagcattcaagaaacatcatgatgattttcaaaagacacaattatcc
agtgttggtcgtactcgcatgggagaaaaaactgaaaaaatcgcatgtcctacaggaaat
tttgatccagatttgtatgcaggaggaaagaaaggatttggctttgatagaacagtagaa
gatgactggggagaaggaggttctggaggtggcagtaatgatattacttcaaaggattgg
tctgaatttttcaaagaacagttttccatgagaaagagcgctacacaaaccaaaactcaa
aggaaacgttccaaagaatctgatgaagactggcctgatgattgtccactgattaaacca
gaaagcaacagacttccgaaatgtacctggaagattaggaaaggatgttacgacagactt
cacgttactttgacgagtaattacgaagcaactcaaggaaagtcagatgcaagtgattgg
gaatctcattgtgctgcagcagatctggaatttgaaatattttcaaccgctaaaaatttg
atgatttatcgagctcatgttgtgagaaaagtaaatgaaattagaaagatgacaacagaa
aagaaattacacgatcaatttgaaaagtctaaaaacggtgattccaagtccagatcaaaa
cagtcttttgactctgaaaaggaagatttccagcaatcaactactctaaaacgtaaaaga
gcaagtcatatgtattctctctgtggtgtggataacccaacaggagatgcttttcaaact
gctgctaatttgctaaaggataacaagatgaatcaggaagaaaattctacattagaaaaa
tctgctaaatgtgaaccaccattgaagaaaacagctatcacttttgatgataaggtgcaa
tgcaaatccatcgagagatatatcaagcccaatacatcgtacaaaaaatcttcaaaaaaa
ctaactaaatcgaaccaaaataagtgtgatactgtgaaaatagcagaagctcaacaaaat
gttgctaaagatgagtcagaaccgccttctaagaaacgtttgtcatcttctgaaaagcca
actcaaacacagaaaacagcaattttaaaaacatgtgataaaaaatcagatgtaagcaac
aatgagaaaaaattcagcatcagagattggttcaacagttcttcagctaaaaaacacgaa
gtctctaataaatcagaaacgaaggaaattgtagatcttacactttctgattcagatgac
tcagctgaagaggaacgattatttggaagatccactccaagtcctgtgagtcccattaat
ataaaaatggaaaaacctgataaattgaaaacacgagaaattgaaaaaatgagtgatagt
agctctgaagatgagagtgatgatggccctgttattgtgtcagcgtacaatcggtaccaa
actgggcctctgatcgatttgtcagactctgaagatgaaattgaaaaatctcagtcagaa
gaaacagataatttatttactggaattacatcactggataaaatgtcttctgcctctaat
gaggataggacacctgaaagggatacaccttcatttctgaagtgttctgatagtaaggat
cttgaaaacaataaaagtaaaagtgataagactatatttgaacagattttaagtggtgat
gataaagatttgcagtttagcacatcgtttgtgtccaaatctgaggattcttcaagtgat
ccgattgattcatcaaatgtcacgcaacctctttctcaacaacggaggacgttcagtgaa
aaatctgagcacattatcaatttcacctcagaaaatgtgagccaaatatcgccatgcagc
tttgtttctacctctgatgatctaacaaccccatttgtgaggccagtttctggtgatgag
cctaaagcgacaatagttactacatctgtgaatgataaattgaaaatacatccctttcat
gaccagttgacaccgaaggttgaatcagaagtaaacaatgattcacatcctcattccctt
cacacacagcaagatgattcaaaaaagttcaattttaaaagagaactgaataataacaca
gaaagagttgcaataaaaagcgaatctccagtttctgacactaccattaataagccctct
gatgccaaaactaggttcaatctgacagttagtcttgaatgcggacaacaaaatcaagaa
actgctgttgcgtcatttcgtaaagcaagtaaagaaattctcaaaatcgttgatgggtta
cccgccttaaaagcaatctgtgaaacatcatcaacgaatgtttttcaagatgttggtaac
agaaacgattcatcgcctttgcttaaagtgcttgagcaacctgaaccacgcgaagacatg
tcgttccatgacaaagatgatcgcttattatataatttaccaatgaagcagttagacagc
aaggttgatgagcagagcaaacctaagaatgttccagaaataaagaatgacaaaagattg
aaagaaatttctgatattgtcatcagatatctttcacctttttataagagagggttcatc
aaaaataaagatttgtttaaaagttttgcaaagaaattaacaaatttaatgttgacggaa
gcctcaatggttgaaaaagatgaaaaaaaaatcgcaagagatattgttgacaactttttc
aagcattgcacgaagcttaaatctgaaaatgatttggtcagattggaaaacattttcaaa
aatttcatgaagagttatggataa
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