Styela clava (leathery sea squirt): 120332270
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Entry
120332270 CDS
T07291
Name
(RefSeq) tonsoku-like protein
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120332270
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120332270
Transcription factors [BR:
sclv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
120332270
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120332270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
TPR_12
Ank_3
Ank_5
TPR_1
Ank_KRIT1
LRR_6
TPR_8
TPR_10
LRR_TMOD-LMOD
TPR_2
Par3_HAL_N_term
Motif
Other DBs
NCBI-GeneID:
120332270
NCBI-ProteinID:
XP_039255412
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MEKDPVKQIRKYQKQRVKCQEKGNLKEEAEILNVLGELHTELGDHEESLTLHKEELGLCR
VSEDKIGQAVAHRKIGECFAALENYTKALQHQHRHLELAKVAENLPEQQRAYTTIGRTYL
IQGEDLHNAGSFEEARPLFKKAETSFQSSLRLSQSIQESKTLSEKEVHQMKTRSITNLAL
AYHYISLEKYEKNDGIYAKQSLALFQKALNISQKYMLAAESHQTNILLTSYYRNRLQPDL
AIRYAEDACRNAKVARNIQWQIEALNVLGEIHLTTGNCKSSKKSLKKSFRLINSSEQKTE
VREKLKSVVKINHLQSKIKDSLTTADEKFKLHDIVADKFCDLGCYQAAIGHYKQQELLFP
LLDTVTDKQKASVYYSLALTNSDLNNYETAIEYYKKEMEFYTEPKELSKTWTQIGICLEK
LSKPPEEIEGCYNKAIEYAEKSKDCKLQLKVLNLQLDIQVKSNLPSADETRKKISEIQMK
SGILVLDNEEDSEDICGKGSGEAAAPEEIQNETSFDIRDEDSEDLLEKELENVSSDNSDT
EETRKSRITSKVWKRKLNEKGETPLHRACIDGHMKRVQLLLEQGHPVNEPDYAGWLPLHE
ACNHGFVEIVRLLINHGANVNYPAKCGGTTPMQDAATNGHLDIVALLLEKGANPSIKNKE
GETPINALESWFSRSRSQLDSYDIESYRKIHESLLKAATSGGHKENTVPSSDLSVALGNM
DDLFDSEISSQKTIEAGGGLTQTYNRGIPENIFTPYSENSTKPSQNSAYVHEVEDLPNFS
QNIDDFGDLDPKYDENDLNFSDSQILPTLESRTRISKVRLSQGGDKDSFFDGAGEYQQAM
NSLGGSEALARLSNGVKSSRAPKRPSTDGFDLVKQGLVGEDDYTGEDWLIDDTDDVGSNP
SLTTQMRPPKRPKTVHSTNTGQTNFGTYGWKQSNSVKKSLKDTNSGSFSSSFLNRSSIRN
KTQPKKLITTKIKDFMPEPLINDDITIDDDDVMRIPSVPNDIPSVPSTSFITPNPPTTQP
ITTQPTQTMRVKVKINGKMFLIAVPGSTKTISWLCERAATVYKQNTGLLPKLTLYTGGSV
NEEDACLLSNDDLVSDALQTNEHVTAKISAWEKTPLSQKYEEACKENNQVTNPTILNACH
QSVSTGKVDLKNSGLSSLHLKTLVSSLTHQEITSILLPGNCLHDDGVATLCESLQRHMTL
TCPSNSFNSTLTELDLKCSNLTQHGLRRLAQAAESGALKQLQTLDISYNRFGDSCLENLA
TLIKSVTSLKRLSLSRCRFTNKLFENNYLAFKAAMQGHMLLSTLDVSHNQIGSVGVELLL
KSLPHSTLTDLNISGTCDAANNLLLMRHVINYLKQEGCNLQVLHLAANHLNFEMISELAR
ELTKIQQQLPLQSLNISKNLLNSSMELKITSLLNQIPSIAEISVNPCCHKWKANIMSIKA
SKTGNHMTHRGRLLFA
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatcctgtaaaacaaatacgaaaatatcagaagcagagagtgaaatgtcaa
gaaaaaggaaatttaaaagaagaagctgaaatactgaatgttcttggagaactccataca
gaacttggtgaccacgaagaatctttaacactgcacaaagaagagttgggtctgtgtcga
gtctctgaagataagattggacaagctgttgcccatagaaagattggagaatgcttcgca
gctcttgaaaattacacgaaagctttgcaacatcaacacagacatctggaacttgctaaa
gttgccgagaatctacctgaacaacaacgcgcatatactaccataggaagaacttatttg
atccaaggagaggacttgcataatgctggatcgtttgaagaagctagaccactgttcaag
aaggccgaaacgtcctttcaaagcagccttcgtctttcccaatcaatacaagaatcaaag
actctatcagagaaagaagttcatcaaatgaaaacaagaagcatcacaaaccttgcgttg
gcgtatcattatatttcattggaaaaatatgagaaaaatgatggaatttatgcgaaacag
agtctggctttgtttcaaaaagctttgaatatctcacaaaagtacatgttggcagcagaa
tctcaccaaacgaacatattgctaacgtcgtactatcgaaatagactacaaccagactta
gcgatacgttatgcagaagatgcatgcaggaatgctaaggttgccagaaatatacaatgg
caaattgaagcccttaatgtcttgggagaaattcatcttacaacagggaactgtaaatct
tctaagaaatctttgaaaaagagttttcgtttgataaattcatcagaacagaagactgaa
gtcagagaaaaactcaagtctgtcgtaaagatcaaccatctacagtcaaagataaaagac
agtttaactacggccgatgaaaaatttaaactacatgatattgtggccgataagttctgt
gacttgggctgctatcaagctgcaattggacattataaacaacaggagttattgttccca
cttctcgatacagtcacagacaagcagaaagcttctgtatattattctcttgcattaacg
aactcagatctcaataactatgagacggctatcgagtattataagaaagaaatggagttt
tatactgaaccaaaagagctatccaaaacctggacacagattggaatatgtttagaaaag
ttatcaaaacctccagaagaaattgaaggttgttataacaaggcaattgaatatgctgag
aagtcaaaggattgtaaattgcagcttaaagtcctgaatcttcagcttgatatccaagtg
aaatccaatctgccttcagcagatgaaacgagaaaaaaaatatcagaaattcagatgaaa
tcgggaattcttgttcttgataatgaagaggattcagaagatatttgtggcaaagggagt
ggggaggctgcagcaccagaagaaattcaaaatgaaacgagtttcgatattcgggacgaa
gacagtgaagatctgcttgagaaagagttagagaacgtttcatcagataactcagacaca
gaagagactcgtaaaagtagaatcacaagcaaagtctggaagagaaagttgaatgaaaaa
ggtgaaaccccgctacatagagcttgcatcgatggccatatgaagagagttcaactatta
cttgaacagggtcatcctgtgaacgaaccagactatgcaggatggttgccgttacatgaa
gcttgtaatcatggattcgtagaaatagttcgacttctaataaaccacggtgcaaatgta
aactaccctgctaaatgtggaggaacaacacctatgcaggatgctgcaaccaacggccat
ctagacattgtagctttgctgcttgagaaaggtgctaatcctagcatcaagaataaagag
ggtgaaacgccaatcaatgccttagaatcctggttttcaagaagtcgaagccagctggac
tcgtacgacatcgaatcttacagaaaaatccatgaaagcctactgaaagcggccactagt
gggggacataaagagaatacggtgccgagttcagatttaagcgtcgctcttgggaatatg
gatgacctgttcgactctgaaatttcctctcaaaaaactattgaagccgggggaggactt
acgcagacttataataggggaatccccgaaaatatttttaccccctactctgaaaattct
acaaaaccttcacaaaactctgcctatgtccatgaagttgaagatttgccaaatttttct
caaaatattgatgattttggtgatctagacccaaaatatgatgaaaatgacttaaatttt
agtgacagtcagattttacctaccttggaatcaaggacaagaatttcaaaagtacgactg
tctcaaggtggcgataaagattctttttttgacggtgctggggagtaccaacaagctatg
aatagtttgggcgggtccgaagcactagcccgtttatcaaacggggttaaatcctctcgc
gcccccaaacgaccttcaactgatggatttgaccttgtaaaacaaggtcttgtgggtgaa
gatgattatacgggtgaagattggctcattgatgatacagatgacgtgggttcgaacccc
agtctcaccactcaaatgagacccccaaagcgacccaaaacagtacactcaacaaataca
gggcaaacaaattttggtacttacggatggaaacagtcgaattcagtgaaaaagtcatta
aaagacacaaattcgggcagtttttcatcctcgtttctaaatcgaagcagtattagaaat
aaaacccaaccaaagaaattaataactacaaaaataaaagattttatgccagaacctctt
atcaatgatgacatcactattgacgatgatgatgtcatgagaattcccagtgttcccaat
gatattcccagtgttccttctacaagttttatcactccaaatcccccaacaactcagcca
ataacgacacagccgactcaaactatgagagtaaaagttaaaataaatggaaagatgttt
ttgattgctgtgcccggcagcacaaaaacgatttcctggctctgtgagagagctgcaact
gtttataaacaaaacactggtcttctacctaagcttacactctatactggaggatcagtc
aatgaggaagatgcttgtcttctttctaatgatgatttagtcagcgatgcccttcaaacc
aatgagcatgtcactgccaagatctcagcctgggagaagacgcctctgtctcagaaatat
gaagaagcttgcaaggaaaataatcaagttaccaacccaacaatccttaacgcctgtcac
caaagtgtcagtaccgggaaggtagatctgaaaaattctgggctatcaagcttgcatctg
aaaacattggtttcaagtctgacgcatcaggaaattacatccattctgttgccaggcaac
tgtttacatgacgatggagttgccaccttgtgtgaatcgttacaaagacacatgaccttg
acatgcccttcaaattcttttaattcaaccctcactgaattagatttgaaatgttcgaat
ctaacgcaacatggtttaagaagattggcacaagctgccgaaagtggggctttgaagcaa
cttcaaacactggacatctcttacaatcggtttggagattcatgcttagaaaatctggca
accctgatcaaatctgtcaccagtttgaaacgactttcactgtcaagatgtagattcaca
aataaattatttgaaaataattatctggctttcaaagctgcaatgcaaggtcacatgctt
ctgtcaacactagatgtctctcacaatcaaattggatcagtcggagttgaacttttactt
aaatctctccctcattctactctgacagatttgaatatttctggcacgtgtgatgctgct
aataacttgttgctaatgaggcatgtcatcaactatctcaaacaggaaggctgcaatctt
caagtgttgcatctggctgccaatcatctcaattttgagatgataagtgaacttgctaga
gaattaaccaaaattcaacaacaactacctcttcaatcgttaaatatttccaaaaacctt
ctaaactcttccatggaattaaagatcacatctttgttgaatcagattccaagcattgca
gagatcagcgttaatccttgctgccacaagtggaaagctaatataatgtcaatcaaagct
tcaaaaactggaaatcatatgactcatagaggacgattattatttgcttaa
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integrated database retrieval system