KEGG   Styela clava (leathery sea squirt): 120332421
Entry
120332421         CDS       T07291                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
sclv  Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sclv03036]
    120332421
   03400 DNA repair and recombination proteins [BR:sclv03400]
    120332421
Chromosome and associated proteins [BR:sclv03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120332421
DNA repair and recombination proteins [BR:sclv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120332421
SSDB
Motif
Pfam: MMS19_N MMS19_C IFRD ARM_ECM29_C
Other DBs
NCBI-GeneID: 120332421
NCBI-ProteinID: XP_039255593
LinkDB
Position
Unknown
AA seq 1046 aa
MEELVQKYLKDDENEKDSLVKDIILAISTASGSILQLMETLHHDLTSTDVDVRLKPVNLL
AAVLSDIHPSCLKSKESAVIIEFLCQRLQDHFFLQSPTLKCLVALSSRGDLQVGAAESII
KILFKEVHVPSCMQSDRRNVYELLANLLEHSTTEVRNLGDEFVYGVITAVDGEQDPRNLL
KVFDLLYSIVRSGFDLSKFAEEFFEVVGCYFPIDFHPPSDLSGNKVVITNKELVIGLRRV
LTSSLLFAPFCIPLMIEKLESDVQSAKIDAILTLKSCMNVYSSEDIKSHVKSLWICIRKE
VLSSNSKEIEEACHDLLKRIVLVLSKAPVGASKKSELDVFLEDVKVSCLPHLVDHLQEVM
AWSSSKLMISCSEASKRSCEIIVSSMVPVLLKSQDKKDMMIAEKRLAMEVLVNAVKSTSL
HEFKDDMGSHPLSEHKNDLIELFCGRLSLNEFVHLRTIALAGVAALCNLGLLITPSEQIT
IVHSLINCLNNEKDSAILNDLHMTCGFLSSKWPDVALAHLLPVLKIPLTGIFSINQQDKT
KCLSTICSISTRIEVTSITCDLLMEQVLSRNVDEKNVSTILACLDSLYVIVKGNVKDKST
VDHFTNVLVFPLIETCVKLSLVPSLPEQCCSTCSDLQSFSSNCITWPIMQKACEILRTIC
QQLEPGKIADNICVNLKKIFLDCDLVSLDIKIDKSTFNPFLFTKLPLQTRLISILTATIC
AFHNKVLFPSTDTFLEKLLHLCGETIDQPSYASASKCIAGIINKQKEPSTAFLDKVLQIS
DCLFDDSVLVESKVAILSLIVWVTKALVIRSHSYTMRYADILFQLFATEKWGKMAADSFD
IILRDSEEVLSTSCHAVVRLMYKQRFFQSVLPKLTTGFHDTEEKQKSMMETEPVTENSNL
LSQTKANYLTALSHLLRYLPKQVLNQHLSSLLPMLIKSLNSDEGPLLVSVLSTLYNLTQE
AKSSVEPHVDMLLEHFVRLSNFKANMHVRIQALKCIGVMTLLPVSLVLPHKKKTIRLLSC
TLDDKKRLVRKEAVKARTEWCLLGDV
NT seq 3141 nt   +upstreamnt  +downstreamnt
atggaagaacttgtacaaaaatatctaaaggatgatgaaaatgagaaggattctttagta
aaagatattatattggcaatttcaactgcctcggggagtattcttcaacttatggaaaca
ttgcatcatgacttaaccagtacagatgtagatgtgagattgaagccagtcaacttactt
gcagctgtgctatcagatatacatccaagctgtttaaaatcgaaagaatccgcagttatt
attgagtttttatgtcaacgtttacaagatcattttttccttcaatctcccacattaaaa
tgtcttgtagctttaagttctcgtggtgatcttcaagtaggtgcagctgaatctattata
aaaatcttgttcaaggaagtgcatgttccatcctgcatgcaatctgatagacgcaatgtg
tatgaacttttagccaatctattagaacattctacgaccgaagtgagaaatttaggtgat
gaatttgtatatggtgtaattactgcagttgatggtgagcaagatccaaggaatttgtta
aaagttttcgatcttctgtattcaattgttcggtctggcttcgatctgtcaaaatttgct
gaggaatttttcgaagttgttggttgttattttccaatagactttcatcccccctcagat
ctatccggaaataaagttgttattacgaataaagaacttgtcattggtttgcgtagagtt
ttaacgtcttctctgttatttgctccattttgtattccattgatgatagaaaaactggaa
tcagatgttcaaagtgctaaaattgatgcaatcctgacgttaaaatcttgcatgaatgtt
tattctagtgaagatatcaaatcacatgtaaaatctctctggatttgcattcgaaaagaa
gtgctgtcatccaattctaaagaaattgaagaagcatgccatgatctgcttaaaaggatt
gttcttgttttgtccaaagcacctgtaggagcatcgaaaaaatcagagttagatgtattt
ttagaagatgtaaaagtgtcgtgtttacctcatttagttgaccatttgcaagaggtaatg
gcttggtcatcatctaaacttatgatttcatgttccgaagcttctaagcgatcttgcgaa
attattgtgtcttccatggttccagttttgttgaaatcacaagataaaaaagatatgatg
atcgcggaaaaacggttggcaatggaagttcttgtaaatgctgttaagtctacttcattg
catgaattcaaggatgacatgggttcgcaccctctgtcagagcacaaaaatgatctaatt
gaacttttctgtggtcgactttctctgaatgaatttgtacatttacgtaccattgcgctt
gccggcgttgccgcattatgtaatttgggattactcataactccttcagaacagatcaca
attgttcatagcctgattaactgtttgaataatgaaaaagattcagcaattcttaacgat
ttacacatgacatgtggatttttatcctcaaaatggcctgatgttgctttagcacatttg
ctaccagttttaaaaatccctctaacaggaatattttccataaatcagcaagacaaaact
aaatgtctttcaacaatatgcagtatttcgactcgtattgaagtaacatctataacatgc
gatttgcttatggaacaagttttgtcaagaaacgtggatgagaaaaatgtctcaacgata
ctcgcttgcttggattcattgtatgttattgtgaaaggaaacgtcaaagataaaagcaca
gtggatcatttcacaaatgtacttgtatttcctctgattgagacttgcgtcaaattatct
cttgtaccgtctctccccgaacaatgctgctctacatgcagcgatcttcagagtttttct
agtaattgtataacgtggccaatcatgcaaaaagcttgtgaaattttaagaacaatttgt
caacaattagagcctggaaaaattgcagataacatttgtgtaaatctgaaaaaaatattt
ctggattgtgatctggtctctcttgatatcaaaatagacaaatctacgttcaacccattt
ttattcactaagttaccactgcagacaaggttgatttctatcctaacagcgacgatttgt
gcattccataacaaagttttatttccatccactgacacattcctggaaaaactgcttcat
ctttgtggagagacaattgatcaaccatcatatgcttccgcttcaaaatgtattgctggc
atcatcaacaaacaaaaagagccatctacagcatttcttgacaaggtgcttcaaatcagt
gattgtttatttgacgattccgttttggtcgaaagcaaagttgcaattttaagtttgatc
gtttgggtgacgaaagctcttgttattcgttctcattcctacactatgagatatgcagac
atcctttttcaactatttgccaccgaaaaatgggggaaaatggcagctgacagttttgat
attattttaagggattctgaagaggttttgagcacatcttgtcacgctgttgttcgtctc
atgtataagcaaagattttttcaatcagttttgccaaaattaacaacaggatttcatgac
acagaagaaaaacagaagtcaatgatggaaaccgagccagtaacagaaaattccaatttg
ttatcacagacaaaagctaattacttaacagcattgtcacacctattgaggtatcttcca
aaacaggtgctaaatcaacatttatccagcctgttaccaatgttgataaaatctctaaac
agtgatgaaggaccgttgcttgtgtctgtgctttccactttgtataatttgactcaagag
gctaagtcatctgtagaacctcatgttgatatgctattagaacattttgtcagattatcg
aatttcaaagctaatatgcacgttcgcatacaggctttgaaatgtattggagtgatgacg
cttcttccggtaagtttagttctaccacataagaagaaaacaatacggttattatcctgt
actcttgatgacaaaaaacgattggttagaaaagaagctgtcaaagctaggactgaatgg
tgcctacttggtgacgtttaa

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