Styela clava (leathery sea squirt): 120332514
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Entry
120332514 CDS
T07291
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120332514
Enzymes [BR:
sclv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120332514
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120332514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
WDR55
WD40
Beta-prop_THOC3
zf-RING_2
WD40_WDHD1_1st
zf-C3HC4
zf-RING_UBOX
EIF3I
Beta-prop_WDR3_1st
zf-C3HC4_2
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
zf-rbx1
Beta-prop_NUP159_NUP214
zf-C3HC4_3
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
zf-RING_5
zf-Nse
zf-C3HC4_4
zf-UDP
Beta-prop_TEP1_C
MOM1
DUF4200
Beta-prop_WDR90_POC16_2nd
zf-RING_Vps41
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
120332514
NCBI-ProteinID:
XP_039255712
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MSDYDTSDDWIDWNPNGIPSTDDETDNEDIQSDISDTDSNVMLLNHERHLQRRNALPNIQ
DSSEIDTLDQNEENIISSGEETDNEEEEENNGEEDLLSIASNGYRSADSQLIGQTAPPET
TTTSRPLTPVPSTSTKRKQSSPRPNPSPKKTKESSLSQEEDGDCCPICFEHWSNSGKHRL
SSLKCGHLFGQSCIERWMKGAKKCPQCNTKARKADIRVLYAKKLTAVDTTELTEATTAFE
HEKKLRRNKEMELAKVQMQYQMAMTECNRLKSQLEDLKNMYASSTLPTRVSGKTNTRSRA
EKKFSHIKNVLISSTGNCRVMDYHAESLSLAISQPSPHTTFMQGFGLKKFSVCDMKSSHF
NILHSKPIRDVRFSPHNSFVLTASQDETLKITNWENNSSVHTYKPQKPVWSCCWDMKDSN
LLYGGLSDGSIKCYDMRNTTDVLHTILNPVSRCPIVSLYNVSQTSDSETSTNGLLSQTFK
NVTFWRQSTEELEYSPHYLPLQPGNCAGLQYCDNLKQCLVTFRPGQSYTCTTHILCQMEF
NNSMITNVIETYNGGQCHKMLTRNSLFSTNSSNNLVCVTDEGKNLVNIYEAQSKGSLIQS
LSCSGPALDILPMKINEKQLLATLSDKELKVYEQK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactatgatacttctgatgattggatagactggaatcccaatggaattccatcg
accgatgatgaaacagataatgaagatattcaatcagatatcagtgacacagattccaat
gtaatgttgctgaaccacgaaaggcatttacaacgcagaaacgccctcccaaatattcaa
gactcaagtgagattgatactttggatcaaaatgaagaaaatatcatttcatcaggtgaa
gaaactgataacgaagaagaagaagaaaataatggtgaagaagatttattatcaattgca
agtaatggatatagatcagcagacagtcagctaattggacagacagccccaccagaaaca
acaacaacctcaagacctctgacccccgtgccatccacatcaacaaaacgtaagcaatca
tcacctcgacctaatccgagcccaaagaaaacgaaagaatcgtcgttatctcaagaagaa
gacggagattgttgtccaatttgttttgaacattggtcaaacagtggaaaacacagacta
tcatcactgaagtgtggccatctctttggacagagctgcattgaaagatggatgaaaggt
gcaaagaaatgtccgcagtgcaatacaaaagccaggaaagctgatatcagggttttatat
gcaaaaaagctgacagctgtcgatacaacggaattaacagaggctactacagcctttgaa
catgaaaagaaactgagaaggaacaaggaaatggaattggccaaagtacaaatgcaatat
cagatggcaatgactgaatgtaacagattgaagtcacagttggaggatctcaaaaacatg
tatgcgtcatcaacattaccaacaagagtgtcaggaaagacaaatacaagatcacgagcg
gaaaaaaagttctcacacatcaaaaatgttttaatatcttccactggaaattgcagagtc
atggattatcatgctgagtcgttgtctctcgctatatctcagccaagtccacacacaact
tttatgcaaggttttggattgaaaaaatttagtgtttgtgacatgaaaagcagtcatttc
aatattcttcattccaaaccaatcagagatgtcagattttcacctcacaatagttttgta
ttgacggcatctcaagatgaaacgttgaaaataacaaactgggaaaacaattcttctgtt
cacacatacaaacctcagaaacctgtgtggagttgttgttgggatatgaaggattcaaac
cttctctacggaggattgagtgatggatcgataaaatgctacgatatgagaaacacgact
gatgttttgcatacgatattaaacccagtatcaaggtgtccaatagtgtctttgtacaat
gtgtctcaaacttcagattctgaaacttcaacgaacggtcttctttcacaaactttcaaa
aacgtaactttctggcgacagtcaactgaagaattagaatattctccacattatttacct
ctgcaacctggcaactgcgctggacttcaatattgtgataatttaaaacaatgtttggtc
acgttcagaccaggacaatcatatacttgcacaacacatattctctgtcaaatggaattc
aacaactcaatgatcacaaacgtgatagaaacatataatgggggacaatgccataaaatg
ttgacaaggaattcattattctcaaccaattcgtcaaataacttagtctgtgtgacagat
gagggaaagaatttagttaatatttatgaagcacaatcaaaaggaagtttaattcaatca
ttatcatgcagtggtccagctttggatatattacctatgaaaatcaatgagaaacaactt
ttagcaactttatctgataaagaacttaaagtatatgagcagaaataa
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