Styela clava (leathery sea squirt): 120332615
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Entry
120332615 CDS
T07291
Name
(RefSeq) WD repeat-containing protein 3-like
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120332615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sclv03009
]
120332615
Ribosome biogenesis [BR:
sclv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120332615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Utp12
Beta-prop_CAF1B_HIR1
Beta-prop_EML
DSE1_N
NBCH_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ASA1
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR41
CFAP251_N
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Beta-prop_RSE1_2nd
WDR54
Utp21
WD40_like
TRM82_WD
Beta-prop_ACSF4
RMC1_N
eIF2A
Beta-prop_Nup120_160
PAC11
VPS11_N
Nucleoporin_N
Beta-prop_RIG_1st
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
120332615
NCBI-ProteinID:
XP_039255830
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MGLSKQYLRYLPFSQFGVVASQRCNVLFLSMRNSSTRYVAAGSCEHVNIWDVKTNRKVMV
LKGEKYSVTCLAKSPSGHHLAVGYSDGSLRIFSLMTSEVIVTYSGHSSSVSCVAYDSNGM
RLASGSNDSEIIVWDLVNECGLYKLNGHKEQITACCFVSKRNMLITSSKDTFIKWWDLDT
QHCFKTMVGHRAEVWDFVLSPDNEFLITGSSDSSLRVWKVQYNNENDNFEPVEKRQKTDS
DSEDEHETTSQRYGVVCTKFGSFLREETDRVVSLCLSPDGKLIVCHGNNKTIELFKVRSE
DEIKTHMKKKIKKLKKKDSDNKDEETAIPNIEASDKFVHIGKFRVPGKMKSVDVTKIDGG
DGYQIVTLLHNNQLIIQEATAKLRLPELTPIGKLFSSGHRSACRSATFSSDGLAVLTAST
NSVKMWNRVSQQCIQTSETDHATVCKFVPGDKQFLVGTMNGKLEIHDVPSGRCVEKITAH
PNVINDVALFADKRGFATCSKDQSVKFWDFDLILDEDFSSSTKRLTATHSRTLQLDEEVN
VVEFSQNRKLIACALLNCSVKVFYVDSLKFFLSLYGHSLPVTCMSITSDSSLIATGSSDK
NIKFWGLDFGDCHKSIFAHDDNITSMEFVPDTHLLFTAGKDGSIKQWDGDKFIHIQTLQG
HHGPVWCITSDPQGDYIASCGADVSLRLWTRSSEIVIPDEEHEREREEEDEKRLVKNLSV
TGRTEEGVDEATRASKPTIKTIQGAEQIMEAIELHREEKEKGSQIAPDMTSTAQIHPTLL
AYGNISSEKYVLQILKKIKSADLEESLLVLPFSYVPDFLKLLNEFVSNGWEVELSCRCLL
YLLKVHQGVISSSDVLVPVLEHLQENTESGVKKLQDTIGFNMAALNHLKRQIEAKNEIMF
FDDATEKFSQKTKKKKKKLNHAIITI
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgggattgtccaaacaatatcttcgatatttaccatttagtcaatttggtgtggttgca
agccaaaggtgcaatgttttgtttttatctatgaggaattccagtactcgttatgttgct
gccggctcatgtgaacacgtaaacatatgggatgtgaaaacgaatcgcaaagtcatggtg
ttaaaaggagagaagtattctgtaacctgtcttgcaaaaagtccaagcggacatcattta
gctgttggatacagtgacggatctttgcgaattttcagtcttatgacgtctgaagtaatt
gttacttacagtggtcattcttcttctgtttcatgtgttgcgtatgattctaacggaatg
cgtttggcatctggttctaatgattcagaaattattgtttgggatttggttaatgaatgt
ggcttgtataagcttaatggacacaaggagcaaataactgcatgctgttttgtaagtaag
cgaaacatgcttataactagttcaaaagacacttttattaaatggtgggatttagatact
caacactgcttcaagaccatggttggacatagagctgaggtttgggactttgtacttagc
cctgataatgagtttttaatcacaggaagctcggacagttctttgcgggtttggaaagta
caatataataatgaaaatgacaattttgagcctgttgagaaaagacaaaaaactgactcg
gactctgaggatgaacatgaaacaacatctcaaagatatggcgtagtctgcacaaaattt
ggatcatttctacgtgaagaaactgatcgagtagtatctttatgtttaagtcctgacggt
aagcttattgtatgtcatggtaacaataaaacaattgaactgttcaaagtcaggtctgaa
gatgaaatcaagactcatatgaagaaaaaaattaaaaagttgaaaaagaaagactctgat
aacaaagatgaggaaacagcaattccaaatattgaagcatcggataaatttgttcatatc
ggaaagttcagagttcctggtaaaatgaaatcagttgatgtgactaagattgatggaggt
gatggttatcaaattgtcactttgcttcacaataatcagctcattattcaagaagccact
gccaaattaagactgcctgaattgactccaattggaaaattattttcttctggtcatcgg
agtgcatgcagaagcgcgactttcagttcagatgggttagccgtgttgactgcttccaca
aattccgtaaaaatgtggaatcgtgtgagtcaacaatgtattcaaacttcggaaactgat
catgctactgtatgtaaatttgttcccggggataagcaatttctagttggaacgatgaac
ggaaaattggaaatacatgatgtcccatcaggaagatgtgtcgaaaaaataactgctcat
ccgaatgtgattaacgatgtagcactttttgcggacaaacgtggatttgcgacgtgcagc
aaagatcagtcggttaaattttgggattttgatcttattttagatgaagacttttcgagc
agtacaaaacgtttgactgcgacacattctcgcactttgcaactagatgaagaggtaaat
gttgtggaattttcacaaaacagaaaactaattgcatgtgcattattgaactgttcagta
aaagtgttttacgtcgacagcttgaagttttttctttctttgtacggtcattcgttacca
gtaacctgcatgagcataactagtgacagttcactgattgccactggatcctccgataaa
aatataaagttctggggtctcgattttggggattgtcacaaatctatttttgctcatgat
gataatatcacatccatggagtttgtgccagacactcatcttcttttcacagccggtaaa
gacggaagtataaaacaatgggatggtgataaattcatacacattcagactttgcaagga
catcatgggccggtatggtgcattacttctgacccacaaggtgactatatagcatcttgt
ggtgcggatgtttctttgagactttggacacgttcaagtgaaatcgtgattccggatgaa
gaacatgaaagagagagagaggaagaggatgaaaaaagattggttaagaatcttagtgta
acgggacgtacagaagaaggagtcgacgaggctacaagagcaagcaaaccaacaataaaa
acaattcaaggagctgaacaaattatggaagcaattgagttacatcgggaggagaaagaa
aaaggttcgcaaattgcccccgatatgacatcaacagcacaaatacatcctacattgtta
gcatatggtaatatatcatcggaaaaatatgtcctacaaattttgaaaaaaataaaatct
gcggatttagaagaatctcttctcgttttaccattttcatatgttccagatttcctcaag
cttctaaacgagtttgtttcgaatggttgggaagtagagctgtcatgtagatgtttacta
tatctattaaaagtacatcaaggagtaatctcatctagcgatgttcttgttcctgtatta
gaacatctgcaagaaaatacggaatcgggagtcaaaaaactacaagataccatcggattc
aatatggctgcccttaatcatttaaaaagacaaatcgaagccaaaaatgagatcatgttt
tttgacgacgctactgaaaaattttcccagaaaacaaagaagaaaaaaaagaaactcaat
catgcaattataacaatttga
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integrated database retrieval system
